Xiphophorus hellerii (green swordtail): 116728471
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Entry
116728471 CDS
T07363
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116728471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116728471
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116728471
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116728471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-UDP
zf-RING_2
WWE_5
Motif
Other DBs
NCBI-GeneID:
116728471
NCBI-ProteinID:
XP_032432495
LinkDB
All DBs
Position
11:complement(3934596..3955617)
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AA seq
632 aa
AA seq
DB search
MAIVSGSCARVNGSRNGPSVSATTASGSVGQSQPMIAVWEWQDDLGYWRPYSGQVSAYIE
RCLSPRGHRGGGGAGVTSICLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRSLFAQSS
GLGSGVYWEWANDEGSWTPYETRTSILLEHSYQARQGTADLGPHGYNYIVDLTSLAQVNK
STGFRRQVRRQCNLPYPLASSGPPAPTCSCQQCLSHSSTGPMPSRSRHSFSSSSLNRPIL
QGTGRVAAAHPASVYSPYPRRPLSVGGMSWGSPWPPPSAGQMSAPHLSGSPSANGLSVPS
ISVQLNGSTSVSSALAGMASILMSAVGLGVHFTSAPLPQQQPLQQQHQQQQPAPFALPPP
PPLLPTASRPHSSSSSSSVRRAKRQHRRAPGQRSEDVIQRYMEVVADAPEEDCIICMEQL
SNPSSYETPPSEEGGQSIAPEAVGKFIKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIY
GEKTGTQPKGKMEIYSVAQSLPGHPDCGTIQIIYSIPPGLQGPEHPNPGQPFTCRGFPRF
CFLPDNDKGRKVLELLKVAWMRRLIFTVGTSSTTGEHDTVVWNGIHHKTEMMSNLSGHGY
PDPNYLDNVLSELASQGVTEDCLKPPGSGSSS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgtgtctggctcctgtgccagggtgaacggctccagaaacgggccttccgtg
tcggccacgacagcctctggctccgtggggcagtctcagcccatgatagcggtctgggag
tggcaggacgacctgggctactggcggccttacagcggccaagttagcgcctacatcgag
cggtgtctgtcaccgcgcggccaccggggaggcggtggagccggcgttacaagcatctgc
ctcggacagtcggaccccagcctgtcgccctacctcatagacataccgagcctgaagcag
ttccgacaggacacaggaaagacgcgctccgtgcgccggtccctgttcgcccagtcctcc
ggcctcggcagcggcgtctactgggaatgggccaacgacgaaggcagctggactccgtac
gagacccggacttccatccttttggagcacagctaccaggcacgccagggcacggccgac
ctcggcccccacggatacaactacatcgtggacctgacgtctctggcccaggtcaataaa
tcgacgggcttcaggcgtcaggtgcggcggcagtgcaacctgccctacccactggcctcc
tccgggcccccagcccccacctgttcctgccagcagtgtctgagccacagcagcacagga
ccaatgcccagccgctcgcgacattccttctcctccagtagcctgaaccggcccatcctc
caggggacggggagggtcgctgctgctcaccccgcttccgtctactcgccctaccccagg
agacccctctctgtgggggggatgtcttggggcagcccctggccgccgccctctgctggt
cagatgtctgcgcctcatctgagcggctctcccagtgctaacgggttaagtgttccttcc
atctctgtgcagctgaacggctccaccagcgtgagctctgccctggcaggcatggcctcc
attttgatgtcagcggtgggactcggcgtgcacttcacctccgctcccctccctcagcag
cagcccctgcagcagcagcatcagcagcaacaacctgctccttttgctcttcctcctcct
cctcctctcctccccacagccagcaggccccacagcagcagcagcagcagttcagttagg
agagcaaagaggcagcacaggagagcgccaggccagaggtccgaagacgtgatccagcgc
tacatggaggtcgtggctgacgctccagaggaggactgcatcatctgcatggagcagctg
tccaatccgtccagctacgagacaccgccgtcggaggagggaggccagagcatcgcgccg
gaggccgtggggaaattcatcaagtgtggtcacaccctgcacatgctctgcatgctggcc
atgtacaacaacggaacaaaggacggcagcctccagtgtccgtcctgcaagaccatctat
ggagagaagaccggcacgcagcccaaaggcaagatggagatctacagcgttgctcagtcg
ctgcctggtcaccccgactgcggcaccattcagatcatctacagcatcccgcctggctta
cagggcccggagcatcccaacccaggacagccgttcacctgcagggggtttcctcgcttc
tgtttcctccccgacaacgacaagggcaggaaggtcctggagctgctgaaggtggcgtgg
atgcggcgcctgatcttcaccgtgggaacgtccagcaccaccggtgagcacgacacggtg
gtgtggaacggcatccaccacaaaaccgagatgatgtccaacctgtcgggccacggctac
cccgacccaaactacctggacaacgttctgtcagagctggcctcgcagggcgtgacagag
gactgcctcaaacctccgggcagcggcagcagcagttag
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