Xiphophorus hellerii (green swordtail): 116728530
Help
Entry
116728530 CDS
T07363
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116728530 (cfap54)
Cilium and associated proteins [BR:
xhe03037
]
Motile cilia and associated proteins
Sperm associated proteins
116728530 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
116728530
NCBI-ProteinID:
XP_032432607
LinkDB
All DBs
Position
11:10536444..10562955
Genome browser
AA seq
2557 aa
AA seq
DB search
MDLPATYYGELDEKNPVLSCFRRDTESFLKIMKQVTSTTKRDNSSYAKGIELLMKIRKEY
KQRIPERFYQEHVLQVADILCEYKLYQLALWLGYGLSLLQLSSVQITDITDVDHFMACFF
PEGFELEQGTFTIKTRAMFGCAICIFEEEKKRSILSQKGLSTLLKVLNFIRIMMQAFQQH
EHLSWLIYNGSLSIYNICRYLMSMNCSEQALEYLLWASISLELSIPLMTPRYLPLIVALY
CSVCQCYYDNQAELQAEDFAKRALGKINDMANLEDEAECTNALTQKAYRTASLKLGVLVF
KRTVFESRKLKNTLRTKNKSTLKDIPNIPWPRTPTEQMLVNQFDCTAGQFLAISEALWES
HTRPLEIKLPDEPELLEMIIELLSAGMSILSGGTSTGEQKSDDYQSICPNVLTTESTLVD
LATEGENKIQITSAVRFIKLLFKYKQPEAFSELTKEMLHILSGAEGPPFRKAERELTLLY
SYSNLLYSQRDNTKEDKRDDRQKFLSAVSDELVGMVDTLHLCVFGPDPELRPNPDLVFDI
LVFLWKRLKHIMQSHYLEIQDSVNDQQKLQCYDKLLWCLSVLCDVAIICELANVDCIMVA
EMIHMLGEHVERVLGRINQAEGSVCGRSEDMKQSSFSLLKESNTNLLKKVCEVTEKGLDA
LSKGVSALIPQDRSAITDTACMQKCKSLHPGNPSFTPAEEQNGTNKITVKVEEEKETKGE
SKTEDHQDVESKNLFILAQDFHLGLDIIYHKASVKLMLLNEVKESDLLHRIKKNNLSKAH
LMMQKASAEHSKGEPGESSKIRSLLEEALVLVEKAELEEMKTYMATVRNVNEKKHKAEHD
EGEKAPPPPMLISRTDHSITFAPAEYDLKKRVSWYQLCGRTVQGVNPKVRLGECSLPGTG
NMVPVVSGECLLRVDGLQSNQKYVFAVAAYDSKGQLVGNSIGDTSLPVLACLPTPVLSTW
AHLAEVAFETRQHAVAKRACRKLWSQYIDPDSSSNSKHNRFASSGLHKETLQHTSPNICK
MFLNSIFTETEINIEQASLHFDTCGDRGPFIWEQEARLAETERMMLAMDLAIYLNDGGAS
LRAVVTCYRLLAPLIYHQIACDPVVQVLLKCLVVLEDNSSLMKQRWTGNSSEFLLHMVSC
ITYYLSMALQTFRKYESAAAVLDCGRSLVQEVFDTHFKFGKLILQAGNDKAAAIAAAESQ
RKMSQLIKALHVKSIRCILSEEALNRDHEIAWVTLEDPGVLYRLFPRLSLQDNFDNVIKL
QRKKYFLEFASLLLRRTLEEGSPELVLDWGLAIFQALSRRDEILGLTTKTVQESSKSKEG
ESSMTQRKSIAPQSVPTFEELRRKLRKKLPQSLLKNLKTLRELNIVENLLFLMSFVVQRN
KKRIQLRNLIADERAERSFLNYCMATAHLAKFYQGMHLINEGHLDERYSQIDICWFSLAH
SGIMMRKYSLPSSEKKEELQKASDRKVGIVTPKAERKRREAVRKVIPVAKGITDENEDQH
KDTQERSSYVLLNSVENAALYFRRAMVLAHRGNHWTTLQYMCQSVWDQNHKLTAMAQNGA
LSKSLPPVTADELQAIFTPLLVLATDFTLDMLTKLQIWSLYDLDVNVEELESRLHFSPPY
DDCFLVDLRWVRTLVLYTLEQLQFCEKWETLAHFALLYNSYTRERYALMIVPLLVHAQRN
LLERISSFKGPTVPQPHHVKTENTTGKKMTNRTYAGYQLLSVWNRPPPRKQNVHKKGAKK
HLYKDPFSLKVSELHLAMSLVRVPLVVEDTLSSFREALGKRSPSLPLLQHSRSLIMQLLA
CTQPCFAPQTPTCRTRGGTSRPASQVSFSPAVVTSPDLLPDDLLDEDFSSPNAIYSLPVS
LNSAPTVAAAYTNSIKDLEATGHDSLHILALHEIGNLHFYTGNISAAHSCWRKALDCIFQ
SSGGIQQWDDVNFESSFSQNIVKKAGIWGCLQGAVLAAKIAQFISTSDIKNRTKRCRLSA
HFFKCVLYCSMAHPQKDLQYSSYSIRDELFPGIDLFSEPHRLQVDTTVASLHFVCHWLFI
TGYYITLFPILALYLHFVGPVCRDVERTAEAKILKVRALTELCMFTEAITEAIQFTQGAD
IFLPSGLHMTTANRQPVNTFCSDASLPDNVEAVEDLVNCDFTSEVCTLYGPTLCCKFNLA
RIQLILAIAKSVRGSPVSDSEENSSPSSPQSQEVHTEDMAQDEQERHETEGSSPKTETPK
VVSFAKLKRESSPERIKFLLLEGASTLISSATQQLTSLTCSEAEKLELVVELNLLKANLC
LQQENYAPSSEAAVSALVLLQTSPVTVTPSPPGSKQDTKDYSAPDNLQRDMSRAVEARER
IGVLLWLRCRLTLVHCLTANIPANATLFPGKNINEEIYQVIQQGLDECLQWGDKDNQALF
LVEAVELEAQRNRIDECMAMLKKAVNLLSGRTCMPPGSVLTLARATLLLSDLKKEQSTTL
LKLTQKLLEKKLCLFDENIIWLDGNIRFSPPGPRNIYLPYLDMLNKITMKIGSVLNVGNV
EGSAFVQSSLSTPMKSQHLSDNTEKDSQAVFPPSHES
NT seq
7674 nt
NT seq
+upstream
nt +downstream
nt
atggacctaccggctacatattatggcgaactggacgaaaaaaatcctgtcctttcatgt
tttagacgcgacacggaatcatttttaaagattatgaaacaagtcacttcgacgacgaag
cgcgacaacagctcttatgctaaagggattgaactacttatgaaaatacggaaagagtac
aaacaacgaataccagagaggttttaccaggagcacgtgttgcaggttgcagatatcctt
tgtgaatataagctgtaccagctggctctgtggctgggctacggtctcagcctgctgcag
ttgagctcagtgcaaataactgacattacagatgtggaccactttatggcttgctttttc
cctgaaggatttgaactggaacaaggcacctttacaataaagacgcgtgcgatgtttggt
tgtgccatatgtatctttgaggaagagaaaaagcgcagcatcctcagccagaagggactc
tccacactgctgaaagtgctgaacttcattaggatcatgatgcaggcattccagcaacat
gagcatctctcctggctcatatataatggttcattgtccatttacaacatctgccgttac
ctgatgtctatgaattgcagtgagcaggctctggagtaccttctgtgggcgagtatcagt
ttggagctgtccatccctttgatgacacccagatatctgccacttattgtcgcactctac
tgttcagtctgccagtgttactatgacaaccaggctgaactgcaagcagaggattttgct
aagagagctcttggaaaaataaatgacatggctaacctggaagacgaggctgaatgcact
aatgcattaactcagaaagcttacagaacagcgtctctgaagcttggtgttctggtgttc
aagaggacagtcttcgaaagcagaaaacttaaaaacacgctaagaaccaaaaacaaaagc
accctcaaagatatccccaatatcccatggcctcgtaccccaacagagcagatgctggtt
aaccagtttgactgcactgcaggacaatttttagccatttcagaggcactttgggaaagc
cacacacgtccactggaaataaagctacccgatgagccagagctgcttgagatgatcatc
gagctcctctctgctggcatgagtattttgtctggaggcacaagtaccggtgaacaaaag
tctgacgattaccagagtatttgtcctaacgtactgacaacagaatccactctagtggat
ctagcaacagaaggtgagaataaaatacagattacgtctgcagtgagattcatcaaactg
ttgtttaagtacaagcagccagaagcattctcagaactcaccaaggagatgttgcatatt
ttgtctggtgcggaaggtccgccttttaggaaggcagaacgtgagctcaccttactctac
agttacagcaacctgctgtactctcagagagacaatactaaagaggacaaaagagatgac
aggcaaaaattcttgtccgccgtgagcgatgagcttgttggcatggtcgacaccctgcat
ctgtgtgtttttggccctgatcctgaactgaggcctaatccagaccttgtttttgatatt
ttggtatttctttggaaaagactaaaacatatcatgcaaagtcattacctggaaatccaa
gactctgttaatgatcaacagaagctacagtgttatgacaagttgctgtggtgtctctct
gtactgtgtgatgtggccattatctgtgagctggccaatgttgactgcattatggtggca
gagatgatccacatgttgggtgaacatgttgagagagtacttggccgtattaatcaagca
gagggatcagtttgtggaagatctgaggacatgaagcaaagctccttttctcttcttaag
gagtcaaacacaaatctactaaagaaggtgtgtgaagtgacagagaagggtcttgatgct
ttgtcaaagggtgtctctgcactgattccacaagatcgctcagccatcactgacactgcc
tgcatgcagaaatgtaagtccctacatcccggtaatccatcctttacaccagcagaagag
caaaatgggacaaataaaatcactgtaaaagttgaagaagaaaaggagactaagggagag
tcaaaaactgaagaccatcaggacgtagagtccaaaaatttgtttatactggcccaggat
tttcatctagggctagatatcatctaccacaaggcttctgtcaaactaatgctgctaaat
gaagttaaagagtctgatttgctgcatcggatcaagaaaaataatctgtccaaagctcat
ttaatgatgcagaaagcatcggcggagcacagtaaaggggagccaggtgaaagcagcaag
atcagaagtctcctcgaggaagctctagtcctggtagaaaaagcagagctggaggagatg
aaaacatatatggccactgttaggaatgtcaacgaaaaaaagcacaaagcagaacatgat
gaaggtgaaaaagctccacctccaccaatgctaatctcacgaactgaccactccattact
tttgctcctgctgagtatgacttgaaaaaacgggtgagctggtatcagctttgtgggcga
acagtccagggtgtcaaccctaaagtccgccttggtgaatgcagtttaccaggaactggg
aatatggtgccagtggtttctggtgagtgtttgctcagggtagacggtctgcagtccaac
cagaagtatgtctttgctgtagcagcctatgacagcaaggggcagctggtgggcaactct
ataggggatacatcattaccggtgctggcatgcttgcccaccccagtgctttccacatgg
gctcacttggctgaggtggcatttgaaacaaggcagcacgctgtagctaaaagagcctgc
aggaaactgtggagtcaatacatagatccagacagttcatccaacagcaaacacaacaga
tttgcttccagtgggctgcataaggagaccctacagcacacctctcctaacatttgcaag
atgtttctgaattccattttcactgagacagaaatcaacattgaacaggcgtctctccat
ttcgatacatgtggtgacagaggaccgtttatctgggaacaggaagccagattagcagag
actgagcggatgatgttggctatggacctggcgatatatttgaatgatggtggggcttca
ttacgagctgtagttacctgctacaggctgctggcccctctgatctaccatcagattgct
tgcgatcctgtggtgcaagtgctattaaagtgtctagtggttctggaggataattcatct
cttatgaagcaaagatggaccggaaactcctcagagttccttttgcacatggtttcctgc
atcacctactacctgtcaatggcactgcaaacattcagaaaatatgagtcggccgctgct
gtgcttgattgtgggcggagtctggtccaggaggtctttgatacacattttaaatttggc
aaactaattcttcaagctgggaatgataaagcagcagctatagctgcagctgagagccaa
agaaagatgagccagctgataaaagcactgcatgtgaagagcataagatgcattctatcc
gaggaggctcttaacagagatcatgagattgcatgggttacccttgaagatcctggtgtt
ctttatcgactgttcccccgcttgtcactgcaggataactttgacaatgttataaagctc
caacggaaaaaatactttcttgagtttgcgtcactgcttctacggaggaccttggaggaa
ggaagtccagaactggtgctggactggggactagccatttttcaggctctctccagacgt
gatgaaattttgggactaaccacaaaaactgtgcaggaaagcagcaaaagtaaagaagga
gagagttcgatgactcagagaaaaagtatagcacctcagagtgtgcccacgtttgaggag
ttaagaaggaagcttaggaagaaactgccacagagcttactgaagaatctgaaaactctc
agagagctgaacattgtggagaatttactgtttttgatgtcttttgtggtgcaacgcaac
aagaagcggattcagctgaggaacttaatagctgacgagagagcagagagatctttcctt
aattactgcatggctacggcacatttagcaaaattttaccagggcatgcatctgattaat
gaagggcatctggatgaaaggtatagccagattgatatctgctggttctccctcgcccac
tctggcatcatgatgaggaagtattctctgccctcttctgaaaaaaaagaggaattacag
aaggcttctgaccgtaaggttggcattgtgactccaaaagcagagaggaaacgacgggag
gctgttagaaaggttatccctgtggcaaaggggatcactgatgagaatgaggatcagcat
aaagatacacaggaaaggagttcttatgtactactgaattctgttgaaaatgctgcttta
tattttcgcagagcaatggtactggcccatcgtggaaaccactggacaactctgcagtac
atgtgtcaatctgtgtgggaccaaaaccacaagcttactgcaatggcacaaaatggtgct
ttaagtaaaagtttgccgccagtcacagctgatgagctgcaagccatcttcacccctctt
ctggtgctagccacagattttacgctggacatgctgactaaacttcagatttggagtttg
tatgatctcgacgtgaatgttgaagaacttgagtcgcgtctccacttctcacccccctac
gatgactgcttcctggtggacctgcgctgggttcgaactttggtgttatacactcttgag
cagcttcaattctgtgaaaaatgggagaccctggcacactttgccttactatataactca
tacacacgggaacgttacgccttgatgatagttcctctgctggtgcatgctcaaaggaac
ctgcttgagagaatttcttcttttaaaggacctacagtcccacaaccacaccatgtcaag
acagagaacaccactgggaagaaaatgactaacagaacttacgcaggctaccagctgctc
agtgtgtggaatcgaccccctccacggaaacagaacgttcacaaaaagggagcaaaaaag
catttatataaagatccattttcactgaaagtttcagaattgcacctcgctatgtcgctt
gtgcgcgttccccttgtcgtggaagacaccctgagctcttttcgtgaagcccttggaaaa
agatcgcccagtcttccactcctccagcatagtcgttcattaattatgcagcttttagca
tgcacacaaccctgctttgcaccacagactccaacttgtcgaactagaggaggtaccagc
cgtccagcaagccaggtgtcattcagcccagcagttgttacctctccggacctcctccct
gatgacctgcttgatgaggactttagttctccaaacgctatctacagccttcccgtcagc
cttaacagtgcaccaactgttgctgctgcttacacaaactccatcaaggacctggaggct
accggtcacgactcccttcacattttagctctgcatgaaattggaaacctgcacttttat
actggaaacataagtgctgcacactcctgctggcgtaaagctcttgactgcatcttccag
agctcaggtggcatccagcaatgggacgatgttaactttgagagcagcttctcacaaaac
attgtaaagaaagctggaatatggggatgcttgcaaggtgctgtgctcgctgcaaagata
gcgcagtttatttcaacctctgatatcaagaatcgcacaaagcgttgtcggctgtctgct
catttctttaagtgtgtgctgtattgctccatggctcaccctcagaaggatctacaatat
tcctcatacagcattagggatgaactgtttcctggcattgacctcttttctgagccccat
aggcttcaagtcgacaccacagtagcaagtcttcactttgtttgccattggctcttcatc
acaggctactacattacgctttttcccattctagccctttacctccactttgtggggccc
gtatgtagagatgtagagcgcacagctgaagccaagatcctcaaggttcgtgctcttaca
gagttgtgcatgtttactgaagccattacagaagctattcaattcactcaaggagcagat
atttttcttccatctggactccacatgaccacagcaaatcgacaacctgtaaatactttc
tgcagcgatgcatctcttccggacaatgtggaggctgtggaagaccttgtgaactgtgac
tttacttcagaggtctgcacattgtatggtcctacactgtgctgcaaattcaaccttgct
cgtattcaactaatcttagcaatcgctaagtctgtacgtggcagtcctgtgtcagattct
gaagaaaattctagcccttctagcccacaaagtcaagaagtgcatacagaggatatggca
caagatgagcaggagagacatgaaacagagggatcatcccctaaaacagagacaccgaaa
gttgtctcttttgctaagctgaagagggagtcatctccagaaaggatcaagtttctttta
ttggaaggagcttccactttgatttcctctgctacgcagcagctcacttctcttacctgc
agcgaagctgagaaactggaactggtggtggagttgaaccttcttaaagctaacctctgt
ctgcagcaagaaaactatgcaccaagctctgaggctgcagtttcagctttggtgttgctg
cagacatctcctgtcactgtgacaccatcccctcctggaagtaaacaggacaccaaggac
tacagtgcaccagacaacctgcaaagagacatgtccagggccgttgaagcccgtgagaga
attggagttttgctgtggctgcgctgccggctcactctggtccactgcctgactgctaac
atccctgctaatgcaactctttttccaggtaagaacattaatgaagaaatatatcaggtg
atacagcagggactggatgaatgtctgcaatggggagacaaagacaatcaagctttgttt
ctggtggaagctgtagaattagaagcacagagaaacagaattgatgagtgcatggcaatg
ctgaagaaagcagtgaatctcctgtcaggacggacatgtatgccacctgggtctgttttg
actcttgctcgagccacgttgttgctcagtgacctgaaaaaagaacaaagcacaacactt
ctcaaactgacacagaaactcttggaaaagaagctgtgcctgtttgatgaaaatataata
tggcttgatggaaatatacgtttctctccacccggacccagaaacatctacctcccttac
ctcgacatgctgaacaaaattactatgaagattggttcagtcctgaatgttggcaacgtg
gaaggatcagcatttgtccagtcatcactgtccactcccatgaagagtcagcacctatct
gataacactgagaaagattctcaagcagttttccctccaagccatgaaagctga
DBGET
integrated database retrieval system
