KEGG   Xiphophorus hellerii (green swordtail): 116728614
Entry
116728614         CDS       T07363                                 
Symbol
cul5
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116728614 (cul5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xhe04121]
    116728614 (cul5)
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116728614 (cul5)
Ubiquitin system [BR:xhe04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     116728614 (cul5)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116728614 (cul5)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 116728614
NCBI-ProteinID: XP_032432746
LinkDB
Position
11:complement(5236637..5249638)
AA seq 788 aa
MGPDAPHRPEAAAPGVRHQAAVVRPLLVSLLVTPTACVASCGRHLVSPGCLCRDVHAVCL
WDDKGPAKIHQALKEDILDFIKQAQARVLSHQDDTALLKAYIAEWRKFFTQCDILPKPFC
QLEITLMGKQGSNKKSSVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAF
DSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYMDSTERFYRTQAPSYLQQNGVQNYMK
YADSKLREEEKRALRYLETRRDCNSVQALMECCVNALVTSFKETILAECPGMIKRNETDK
LHLMFSLMDKVPSGIDPMLKDLEEHIMSAGLADMVATAETITSDSEKYVEQLLTLFNRFS
RLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPMKQKGVGLKTQPESKCPELLANYC
DMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEI
EENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVNIKILN
AGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYD
LEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDP
AVSSPKDFAEGTLFSVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRI
LRTQEAIIQIMKMRKRINNAQLQTELVEILKNMFLPQKKMIKEQIEWLIDHKYIKRDETD
INTFIYMA
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgggacctgatgcgccccatcgtcctgaagctgctgcgccaggagtccgtcaccaagca
gcagtggttcgacctcttctcgtgagtcttcttgtaactcccaccgcttgtgttgcttcc
tgtgggcgccaccttgtgtctcccggttgtctctgcagggacgtccatgcggtctgcctg
tgggacgacaaaggacccgctaagatccaccaggcgctgaaggaggacatcctagacttc
atcaaacaggctcaggcacgggtgctgagtcaccaggacgacacggcgctcctcaaggcc
tacatcgcggagtggaggaagttcttcactcagtgcgacatcctgcccaagcccttctgc
cagctggagatcactctgatgggcaagcagggcagcaacaagaagtccagcgtggaggac
agcatcgtccgcaagctcatgctggacacgtggaacgagtccatcttctccaacatcaag
agccgtctgcaggacagcgccatgaagctggtccacgccgagcggctgggcgaggccttc
gactcgcagctcgtcatcggagtacgggagtcctacgtgaacttgtgctccaaccccgag
gacaagctgcagatctacagggataactttgagaaagcgtacatggactccacagagagg
ttctacagaacccaggcgccgtcctacctgcagcagaacggagtccagaactacatgaaa
tacgcggactcgaagctgagggaagaggagaagcgagcgctccgatatctggagacgaga
cgcgactgcaactccgtccaagctctgatggagtgctgcgtaaacgctttggtgacgtcc
ttcaaggagaccatcttagccgagtgtccaggcatgatcaaacgaaacgagaccgacaag
ctccacctcatgttctccctgatggacaaagttcccagcggcatcgatccgatgctgaag
gacctggaggagcacatcatgagcgccggcctggccgacatggtggcgacagccgagacc
atcacctcggattcagagaaatatgtggagcagctgctgactctgtttaaccgcttcagt
cggctggtgaaggaagccttccaggacgacccgcgcttcctcaccgccagagacaaagcg
tacaaagccgtggtgaacgacgccaccatctttaagctggagcttcccatgaagcagaaa
ggggtggggctgaaaactcagccggagtccaagtgtccggagctgctggccaactactgc
gacatgctgctgaggaagacgccgctgagcaagaagctgacctcagaggagatcgaggcc
aagctcaaggaagtgcttctggttctgaagtacgtccagaacaaagacgtgttcatgcgg
taccacaaagcccacctgacccgccgcctcatcctggacatctcggccgacagcgagatc
gaggagaacatggtggagtggctccgggaagtggggatgccggcggactacgtcaacaag
ctggcccggatgttccaggacatcaaggtgtccgaggatctcaaccagtccttcaaggag
atgcacaagcacaacaagctggcgctgccagcggactcggtgaacataaagatcctgaac
gcgggcgcgtggtcgcgcagcagcgagaaggtgtttgtgtctctgcccacggagctggag
gacctgatcccggaggtggaggacttctacaagaagaaccacagcggcaggaagctgcac
tggcaccacctcatgtccaacggcatcatcaccttcaagaacgaagtgggccagtacgac
ctggaggtcacgacctttcagctggccgtgctgttcgcctggaaccagcggcccagagaa
cgcatcagcttcgagaacctgaagctggccacggagctgcccgacgccgagctgcgacgg
acgctctggtcgctggtggcgttccccaagctgaagcgccaggttctgctgtacgacccg
gcggtgtcctcgcccaaagacttcgcagagggaacgctgttctccgtcaaccaggagttt
tctctcataaaaaactcaaaggtccagaagagaggaaagatcaacctgattggtcggctg
cagctcaccactgagcgaatgagagaggaggagaacgaaggcatcgtccagctccggatc
ctcaggactcaggaggccatcatccagatcatgaagatgcggaagcgcatcaacaacgcc
cagctgcagacggagctggtggagatcctcaagaacatgtttttaccacagaagaagatg
atcaaggagcagatcgagtggctgatagaccacaagtacataaagcgggacgagacggac
ataaacaccttcatctacatggcgtag

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