KEGG   Xiphophorus hellerii (green swordtail): 116728645
Entry
116728645         CDS       T07363                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116728645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xhe03041]
    116728645
Spliceosome [BR:xhe03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116728645
 Complex B
    116728645
SSDB
Motif
Pfam: Surp cwf21 CID RRM_1 CTK3 SET_assoc
Other DBs
NCBI-GeneID: 116728645
NCBI-ProteinID: XP_032432798
LinkDB
Position
11:12327697..12339085
AA seq 868 aa
MADRKRKPAASIKPITKKEKVELKKKEEEKAAEVFEEFVASFETSEKSKVKTFVRGGIVN
ATKEEEESEIKKSKLYRPATKFVPVSQHSSPTSLSDSKKSAFKKKTEEKKKSNLELFKEE
LKLIQEEREERHKRKKNDFEAGGEGGGYGDLDVPLSGRSMLYDDLTAPVTTNLYINCISP
KMNEDLLCREFCKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERAMAALDGKVI
MGFEMKLGWGKPARIPPQPLYTPAGVRVAPPPPSGLPFNAQPRDRFRNDFTKPLGSSKAE
LDKTLSEAVVKVVIPTERNLLFLIHRMVEFVVREGPLFEAMIMNKEKNNPDYRFLFDNKS
QDHVYYRWKLFSILQGESPTKWRTAEFRLFRGGSLWRPPILNSYTERSDEGAAVEEAAPP
EEEVKKGQLRAEHRQRLETLVEELTPSREDIASAMLFCLDRADAAEEVVGHISESFCSLQ
VPLQKKISRLYLVSDILHNSCAKVAGASYYRKYFESKLPQIFEHLHAAHKNIQARLQAEQ
FKQKAMNCFRAWEDWAIYPQPYLIQLQNIFLGFAKAGEEETETPEEVSGEIDGAPLDRRL
IDGLPLGKTPVDDIDGCPMGWDPLDGVPVDDIDGVPLNAPIDDIDGVPLDESKLPLSRVP
LSKWEKIGDSAQTDSKWDTLGEQDDEKKAHISCNSQDEDEDSESDSSGDSCRSPNYEGAV
FPHMSESKRKRLREVEVKVMKLQDELESGKRQKKSGMSIQQQVETYRKKLLQKEFHKDEE
KTERSKSKDGQREERRHKERSKKNEDGDRRLSSKLGEKLRKSRSISPSRTKSPKWSKRSR
SPSPDQKVSKSKSRSPHRSHKKAKKSKH
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggcggacagaaaaagaaaaccagccgcctccatcaaaccgatcacaaaaaaagagaaa
gtagagctaaagaaaaaggaggaagagaaagctgctgaagtttttgaagaatttgttgca
tcttttgaaaccagtgaaaaaagcaaagtaaagacttttgtacgtgggggaattgtaaat
gcgactaaagaggaggaagaatcagagatcaagaaaagtaagctgtaccgacccgccaca
aagtttgtccctgtgtctcaacattcctcaccaacgtccttgtctgacagcaaaaagtct
gctttcaaaaagaagacagaagaaaagaagaagagcaatctcgaactttttaaagaggaa
cttaagctcattcaggaggaacgtgaggaaaggcataaaaggaagaaaaatgactttgag
gctggaggagaaggaggcggatatggagatctggacgttccattatcgggacgatcaatg
ctgtacgacgacctgacggccccagtcaccactaatctctacattaactgcattagcccc
aagatgaacgaagacctactctgcagagagttttgtaaatatggccccttggccagcgtg
aagatcatgtggccccgaacggacgaggagcgctgcaggacttcaaacagagcctttgtg
gctttcatgactcggaaagatgcagagagagccatggctgctctagacggtaaagtgatt
atgggctttgaaatgaagctcggatggggcaaaccagcccgtatcccgcctcagcctctg
tacacaccagctggggtgagggtggcacctcctcccccatctggtctccctttcaacgct
cagccccgggatcgcttccgcaacgacttcacaaagccgctgggctcgtccaaagcagag
ctggacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaatctg
ttattccttattcacaggatggtagagtttgtggtgcgtgaaggcccgttatttgaagcc
atgataatgaacaaagaaaaaaacaacccagattacaggtttctttttgacaacaaaagc
caagatcatgtgtattaccgttggaaactgttctctatcctccagggcgagtccccgaca
aagtggaggacagcagagtttcggctgttcagaggcggctccttatggcgaccccccatc
ctcaacagctacactgagaggagcgacgagggagcggcggtcgaggaggccgctcctccc
gaggaggaggtgaagaagggccagctcagagctgagcaccgacagagactggagactctt
gtggaggagctgactcccagcagggaggatatcgccagcgccatgttgttctgtctggac
cgggcagatgcagcagaggaagtcgtgggacacatttcagagtccttttgttcgcttcaa
gttccccttcagaagaagatttctagattatatctcgtgtcggacatcttgcacaactcg
tgcgccaaagtagccggggcgtcatattatcggaaatattttgaaagcaagctaccacag
atatttgagcatctacatgcagcacataaaaacattcaagccagactgcaggctgagcag
tttaagcaaaaggccatgaactgttttagagcatgggaagactgggccatatatccccag
ccttatctaatccagcttcagaacatctttttggggttcgccaaagcaggagaggaggag
acggagacgccggaggaggtatctggtgagattgacggtgcaccattggacagaaggctt
atagacgggcttccgttggggaaaactccggtggacgacatagacggctgccccatgggc
tgggaccccctggacggagtccccgttgatgacattgatggcgtacccctaaacgctcct
attgatgacattgatggagttcccttggatgaaagcaaacttccactctccagagtgcct
ttgtctaaatgggagaagatcggtgatagtgcccaaactgactccaagtgggatacttta
ggggagcaggatgatgaaaagaaggctcatattagctgcaactcgcaggatgaagacgag
gattcagagagtgacagcagtggcgattcctgcaggtcgcccaactatgagggggcagtt
ttccctcatatgtctgagagtaaaagaaaaaggctgagggaggtggaagtaaaggttatg
aaactccaagatgagctggaatctggaaagaggcagaagaagtctggaatgagcatacag
caacaagtggagacctacaggaagaagctgctgcagaaggagtttcacaaagacgaagaa
aagactgagaggtcgaagtctaaagacgggcagagggaagaaaggagacacaaagagagg
agcaaaaaaaatgaggacggagacagaaggctgagcagtaaacttggagaaaagctgagg
aaatcaaggagcatctctccatcaagaacaaagtctcctaaatggtccaaacgttcccga
tcgccatctccagaccagaaggtcagcaaatccaagtcccggtccccgcaccgctcccac
aagaaggcaaagaagagcaaacactaa

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