Xiphophorus hellerii (green swordtail): 116728686
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Entry
116728686 CDS
T07363
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116728686
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116728686
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116728686
04090 CD molecules [BR:
xhe04090
]
116728686
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Nectin family
116728686
CD molecules [BR:
xhe04090
]
Proteins
116728686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ig
Ig_3
V-set
C2-set_2
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
116728686
NCBI-ProteinID:
XP_032432850
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Position
11:14270393..14305096
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AA seq
631 aa
AA seq
DB search
MDHSWRGRMLWICNQGPARSQCQVCPRPPRSRRPTWYSPHAVRSCCRGGSTLQRSSDWHA
SSSLARQQGNALLLLTMLLFSERRHLRQQRKSALCYVLCFISGAVCSQVVVPQRVSAVLG
KNVTLDCRVEVGTNLTLTQSSWERRLPSGSVTVAVYNPELGTFIPPEYINRLHFRSPSSR
DATIVLGNVGFSDVGIYTCKVATFPLGNTQASTTISVLVEPKVYVSAGSAALIDGGNDTV
VATCIAERARPPAEVSWESNLFGQSEVQLFDDVNGTTSTQVRYIWQPTRHVQGHALTCVV
RHPALQSDFRIPYQLNVQFAPDISVVGYDGDWYVGRENVQMTCKANANPPAHHFRWIRLD
SEMPDGVETRNSTLLFLRPLHRNDSGVYRCEVANDINLRSRDVRILIQDPPTMPSTITAP
VLTGSSSSTFVVDKGHVLLSSPTLEALPESNLGSIVGGAVGGALSLLLVLSLVGVCYLRK
PQTFHGSYYAKQNHGTADLQKAAGQHELRPTKAGSGASTRDHDREEWGDRELKKERDQHR
YNEYNGEKYPVNGYTRAMRESGRLNQQQTPRQEHAQFSSPQRPRCARYPHPPKRQGNGSP
YLSDDCYDSGADGDYVSHTDGSLISRREWYV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcctggagggggaggatgctgtggatctgtaaccaggggcccgctcgctcc
caatgtcaggtgtgcccacggcctccccgctcccgccggcccacatggtacagtccacat
gcggttcggagttgttgccgaggaggttccactcttcagcgctcctcagactggcatgca
tcctcctctttggccaggcagcaggggaatgcacttcttcttttgacgatgctactcttt
tctgagcggaggcatctcagacagcagcgcaagagcgcgctctgctacgttttgtgcttt
atttcaggtgctgtgtgcagtcaggtggtggtgcctcagagagtgagtgccgtgctggga
aaaaatgtgactttagactgccgggtggaggttggcacaaacctcactctgactcagagt
tcctgggagcgccgcctgccttcgggctccgtaaccgtggcggtgtataaccccgagctt
ggcaccttcatcccaccggagtatatcaaccgcttgcatttccggtcgccatcctctcgt
gatgccactatcgtactgggaaacgtgggcttctcagacgtggggatctacacctgtaag
gtggctacgtttcctctgggaaacacacaagcctctaccaccattagtgtgctcgtggag
ccaaaggtctacgtttccgccggctcagccgctctgatcgacgggggcaacgacaccgtg
gtggccacctgcatcgccgagcgagctcggccccctgctgaggtgtcttgggagtccaac
cttttcggtcagtcagaggtgcaactgttcgacgacgtcaacggcacgaccagcacacag
gtgcgctacatctggcagcccacgcgccacgtccagggccacgcgctgacctgcgtggtc
cgtcacccggcgctccagagcgacttcaggattccctaccagctcaacgtgcagtttgct
cctgatatatccgttgtggggtatgatggggactggtatgtgggccgagagaatgtccag
atgacatgcaaagccaacgccaacccaccggctcatcacttcagatggatcagattggac
agtgaaatgccagacggcgtggaaacgaggaacagcactttgcttttcctgcgtcccctt
catcggaatgactctggcgtttacaggtgcgaggttgccaatgacattaacctccgcagt
cgagatgtgcgcatcctcatacaagatcctcccaccatgccttccaccattaccgctcct
gtcctaaccggctcttcctcctccacctttgtggttgataagggccacgtcctcctgagc
tcccctacacttgaagccctgcctgaaagtaatcttggttccatagtgggtggggccgtg
ggcggggccttgtccctgcttctggtgttgtctctggtcggcgtgtgttacctacggaaa
ccgcagacctttcacggcagctactacgccaagcagaaccacggcactgctgatttgcag
aaggccgccgggcaacacgagctgcggcccacgaaggccggcagcggcgctagcacccgg
gatcatgaccgggaggagtggggcgaccgcgagctcaaaaaagaacgagaccagcatcgc
tataacgagtacaacggagaaaagtatcccgttaacggctacacgagggccatgagggaa
agcggccgcctcaaccagcaacagactccccgtcaggaacacgcacagttttctagtcca
cagcggcccaggtgcgccagataccctcacccacctaaacggcagggaaacggctccccc
tacctgtcggatgactgctacgatagcggggccgacggcgattacgtgtcacacacagac
ggctcgctcatctcacgtagagagtggtacgtttga
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