Xiphophorus hellerii (green swordtail): 116728770
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Entry
116728770 CDS
T07363
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116728770 (tbc1d8b)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116728770 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
116728770 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
116728770
NCBI-ProteinID:
XP_032432968
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All DBs
Position
11:14504165..14524742
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AA seq
1135 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKDNEYFVLQRRRGYGDGGGGLTGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEIDQHWDWLQQNIMRTLSVFDSTEDITSFVQGKIRG
LIAEEGKTSLVLEDDPEKFREALLRFEKWFELPSQEKLVTYYSCSYWKGKVPCQGWLYLS
TNFLCFYSYLLGAEVKLIISWDEIWRLEKTSNVILTESIHVLAHGEDHYFSMLLHLTETF
VIMEQLANYSIKRLFDKEAFQGEPALSDPLQITKRGLEAHAKSEQFRAFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHIIIPMREVINVEKPDSGSRALTV
CVRGKRALRFSEVRDYQRLANTIRSRCGISASPQHSASSEAIRGECQSLINHFEDNPEDV
TLMVGQKDTSKAVNTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
KKTRDLIVRGVPESLRGELWMLFSGAVNDMATHPGYYTELVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEALIACNDDAEAVTILNRFFDSVTNKD
SPLPPTVQQASVGNNDKASHVSVDISELIREAYEKYGHLRSEEVESSRKRNKLYVIQTLE
DTTKQNVIRVVSQDVRFTTSQLDELYNLFKRQHFLSCYWTMKSPALLHHDPSLAYLEQYQ
LGFQQFSELFSLLEPWAFCASKSTLSLWIFRLIDENQDGLINFKEFCYALDTLYGVSFTN
KLKFLFKLHLPPAFTGSPLHIKEQRVQQFLPTIEDSSHLTRLAAFDLPEDGVIRKSPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQAQFIQFSKTLYNIFHGDPEEESLYRAVA
HVTSLLLRMEEVGRRLQEPSSPPAEATQPASTAVSVEASSTQEASLKETSDASSSHSSQE
GAAEQPDPDWSFSFEQVLASLLNEPVIVGFFERHVHIQTKLGQARVAQLKLKANK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacccgaagaaattctgctgaagaacgccttcaaactgtgggtcaccgag
aaggataacgagtatttcgtactgcaaaggcgacgggggtacggagacggaggcggcggg
ctgacaggcctgctcgtgggaactctggacactgtgttggactcgacatccaaagttgct
ccttaccgcatattgcaccacacaccagactcacaggtctactggtccatagcatgtggg
gtcaccaaagaagaaatcgatcagcactgggattggctgcagcagaacatcatgaggaca
ctctctgtgtttgactccaccgaagacatcaccagcttcgtacaggggaagattagaggc
cttattgctgaagaagggaagacctctctggtgctggaggacgatccagagaaattcaga
gaagcccttttgaggtttgagaagtggttcgagctgccctcccaggaaaagctggtcaca
tattactcatgcagctactggaaaggcaaagtcccctgccagggctggctctacctcagc
acaaactttctgtgcttctactcgtaccttctgggagccgaggtgaaactgatcatctcc
tgggacgagatctggaggctggagaaaacatcgaatgttatcctgactgagagcatccat
gttttggctcatggggaggatcattatttctccatgctgctgcatctaactgagacgttt
gtcatcatggaacagctcgccaactactccatcaagcgtctgtttgataaagaggctttc
cagggagagccagctctctccgacccacttcagatcaccaagagaggccttgaagctcat
gcaaaaagtgagcaattccgggcctttttcaggcttcccaaagaggaaaacttattagaa
gtgcacgagagcttcctgtgggtgccattcagtcattttaatacgcttggcaaaatctgc
ctgtccgagaactacctttgttttgccagtcaggacggaagccaatgtcacatcatcatt
ccaatgcgagaggtcattaatgtcgagaagcccgattccggcagccgggctttgacggta
tgcgtgcgcggcaagagagcgttgcgtttctccgaggtgcgggactaccagcggcttgcc
aacacgatccgcagcagatgtgggatcagtgccagcccgcagcactcggcttcatcagag
gccatacgaggcgaatgccagtccctcataaatcactttgaggacaatccggaggatgtg
actctcatggtgggacagaaagacaccagcaaggctgtgaacaccgaggccctcatgact
gttttccaccctcaagacgttgaaaacctcgatcccaaaatgctgaaagagaagatgaag
gagcagtcttggaacatccatttctctgaatacggacgtgggaccagtatgtttttcacc
aagaagacgcgagacttgattgtccgaggcgttcccgagtctctgaggggagagctgtgg
atgctgttttcaggagctgtaaacgacatggccactcaccccggctactacactgagctg
gtggagcagtctctgggcaccagcactttggccacagacgagatcgaaagagacctgcac
cgctctctcccagaacacccggcgtttcagagcgacacgggaatctcagctctgcgcaga
gtcctcactgcatacgcctacagaaacccaaaaatcggatactgccaggccatgaacatt
ctcacctccgtcctgctgctgtacgccaaggaagaggaggcgttctggctgctggtggct
gtctgtgagaggatgctgccggactatttcaaccgacgaattatcggcgctctggtggac
caggcggtgttcgaggacctgatcagagaaaacctcccgcagctggtggagcacatgacg
gatctgagtttcttctcgtccgtgtccctgtcgtggttcctcacgctcttcatcagcgtc
ctgcccatcgagagcgccgtcaacgtggtcgactgtttcttctacgacggcataaaagcc
atcctgcagctcggcctcgccgtgctggattacaacatggaggccctcatcgcctgcaac
gacgacgcagaagcggtcaccatcctcaacaggttcttcgatagcgtgactaacaaagac
agtcctttgcccccaacggtgcagcaggcttcagtgggcaacaacgacaaagcatctcac
gtcagtgtggatatcagcgagctgatccgagaagcctacgagaaatacggacatttgcga
tcagaggaagttgagagttcacggaagagaaacaagctgtatgtgatccagacgctggag
gacacaaccaagcaaaacgtgatccgggttgtgtcccaagatgtccgatttacaacctcg
cagcttgacgagctttacaacttgttcaaaaggcagcatttcctcagctgctactggacg
atgaagagtccagctctgctccaccatgaccccagcctggcgtatctggagcagtaccag
ctgggattccagcagttcagcgagctcttctccctgctggagccctgggccttctgcgcc
tccaagagcacactctccctctggatcttccgcctcatcgacgagaaccaggacggcctc
atcaactttaaggagttctgctacgctctcgataccttatacggagtatctttcacaaat
aagctgaagtttctcttcaagctccacctgccgccagctttcacaggtagtcctttgcac
ataaaggaacaaagagtccagcaatttcttccaacaattgaagactcctctcacttgacc
agactcgctgcctttgatcttcccgaagatggtgtcataagaaaaagtcctgaaagaggc
aggggaaaggttgaccttcaggcctacctgaaacaatggcaaaatgaaatacttaaaaag
gaggaaacaatcaaggatcttccaagaattaatcaggctcagttcatccagttctccaaa
accctctataacatcttccacggcgacccggaggaggagtccttgtaccgggccgtagcc
cacgtgaccagcctcctcctgaggatggaggaggttggccggaggctgcaggagccaagc
agcccgcccgctgaggccacgcagcctgccagcaccgccgtttccgtggaggcgtcttcg
acccaagaggcctccttgaaggagacctcggacgcctccagctctcacagcagccaggag
ggggcggcggagcagccggatccagattggtcgttttcctttgagcaggtgctggcctcg
ctgctcaacgagccggtcatcgtcggcttctttgagcggcacgttcacattcagacgaaa
ctgggacaagccagggttgcgcagctcaaactgaaggccaataagtaa
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