Xiphophorus hellerii (green swordtail): 116728894
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Entry
116728894 CDS
T07363
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116728894 (ddx52)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116728894 (ddx52)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
90S particles
Helicases
116728894 (ddx52)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
116728894
NCBI-ProteinID:
XP_032433111
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Position
11:10334815..10340597
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AA seq
660 aa
AA seq
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MDTFELFRKLGAGAKFDLKRFGQDAARFKVARSQGGETSLDSLSAINYFGTGAANGAQSW
TQRATQDEEGIESGDSEVGGKRKRKERPGEVRHKSKKTESSRMVEDAPASGEPLTETQRG
GITWTSSLDRKIQNVQKDGTEKFSLKRLKHLHQEKVNRIRAQHRINVHGCDVPDPVCSFE
ELQSEYHLNPRVLQNLKDAGLNTPTPIQMQAIPLMMHARELLACAPTGSGKTLAFSLPLL
AHLQQPANLGFRALVISPTRELASQTYRELLRLSDGVGFRVHIIDKASLAAKKYGPQSNK
KYDILVSTPNRLIYLLNQDPPGINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSN
AKVRRAFFSATCTPEVEKWCRLNLDNLVSVNIGHRNTAVETVEQELLFVGEENGKLVAMR
DIIKKGFLPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIW
VLICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAITFFTENDKPLL
RSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKKPPSRSTICTTPRFLMKKKVKAEKKE
QKKGSNSKQKGENGPQTAQQQGKKKKTKVQKAGQKKGKPKAAAQKGGSKLAGAKLQKKNG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacacattcgagctgtttaggaaactcggagccggggctaaatttgacttaaagaga
tttggccaagatgctgctcggtttaaggtggccaggtctcagggcggagaaacgtcgctg
gattccctgtctgcgatcaactacttcggcacaggagcagctaatggagcccagagctgg
acccagagagcgacccaggatgaggagggcatcgaaagtggagattctgaagtaggaggc
aaaagaaaacgcaaagagcgaccgggagaagtgagacacaaaagcaagaagacggaaagc
agccggatggtggaggacgctccagctagtggtgaaccactgactgagacccagagaggc
ggcatcacctggacctcctccttggacagaaagatccaaaacgtacagaaggacgggacg
gagaaattctcgctcaagaggctgaagcatcttcatcaggaaaaggtgaatcgcattcgc
gcgcagcaccgtataaacgtccatggctgcgatgtgcccgacccggtttgctcgtttgag
gagcttcagtccgagtatcatctcaacccgcgcgttcttcagaacctcaaggatgcagga
ctgaacacgccaacgccgatacagatgcaggccataccgctcatgatgcatgctcgggag
ctgttggcttgcgctccgaccggatctggaaagactttggccttctctcttccgctgctc
gcccacctgcagcagcctgcaaacctgggcttcagggctctggtcatctctccgaccaga
gaactggccagccagacctacagagagttgctgcgcctgtcagacggagtcggctttaga
gttcatatcatcgataaagcttccctggcagcgaagaagtacggtccacagtcaaataaa
aaatatgacatacttgtcagcactcccaacagactgatctacctcctcaatcaggatcct
ccaggaatcaacctgagcagtgtggagtggctggttgtggacgagtccgataagcttttc
gaggacgggaagacgggcttcagggagcagctggcgaccattttcctggcatgttctaac
gccaaggtgcgcagggctttcttcagcgccacctgcacgccggaggtggaaaagtggtgc
cgcctgaacctcgacaacttggtttctgtcaacatcggacacagaaatacagcggtggag
acggtggaacaggagctgctgtttgtcggggaggagaacgggaaacttgtggccatgagg
gacatcatcaaaaaaggtttcctgcctcccatgctggtgttcgttcagtccatagagcga
gcgcgggagcttttccacgagttggtgtatgaagggatcaatgttgacgtgatccacgct
gaacgaacacagcagcagagggacaacgtggtgaacagctttcgctccgggaagatttgg
gtgctgatctgcacggctctgctcgccagaggaatcgacttcaaaggagtgaacctggtg
ctgaattacgacttccccaccagcgccgtggagtacattcacagaatcggccgtacgggt
agagctggacatcaagggaaggccatcaccttctttacagaaaatgacaaaccgttgttg
cgcagcattgctaatgttataaaacaagctgggtgccctgtgccggactacatgattggc
ttcaaaaagatccacagcaaagtaaagcgaagacttgagaagaaacctcccagtaggagc
accatttgcacaacccctcgcttcctcatgaagaagaaagtcaaagctgagaaaaaagaa
caaaagaaagggtcaaacagcaaacagaaaggagaaaacgggcctcagacagcgcaacag
cagggcaagaagaagaagacaaaagttcaaaaagcaggacagaaaaaaggaaaacctaaa
gcagcagctcagaaaggaggatcaaaattagcaggagccaagttacaaaagaaaaacgga
tga
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