Xiphophorus hellerii (green swordtail): 116728899
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Entry
116728899 CDS
T07363
Symbol
rabep1
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116728899 (rabep1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116728899 (rabep1)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116728899 (rabep1)
Protein recycling
Rab4 associated proteins
116728899 (rabep1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
HALZ
Fib_succ_major
Motif
Other DBs
NCBI-GeneID:
116728899
NCBI-ProteinID:
XP_032433122
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Position
11:complement(4857682..4877464)
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AA seq
860 aa
AA seq
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MAEEAEGSPLSSQHDEVLQQRVAALEQERAEFIRLKQQLEAEFNQKRAKFKELYLTKEQE
LKRQTEALENSQSELSAAHTQLSQAQSEIETIKAVATVSENTKQEAIDQVRSQWQEEVAS
LQAIMKDTVCEYEVQFHQRLEQERAQWNQYREAMERELGDLRRRLTEGQEEENLEDEMKK
AQEDAEKLRSVVMPMEQEIAALKAKLNSAEDRVKELEASKVKELNHVLEAEKSCRTDLEM
YVAVLNTQKSVLQEDAEKLRKELHDVCHKLELERQQHNQLKQTWQRANDQFLESQRLLMR
DMQRIESVLSSEQLRQVEEMKKKDQEEDEKERLSLVKDLQEDDGGDNTEPLEDFLGLSVE
EPPTNHSAHGSIHSLDTDIVAGSPSDPYKDNLRRVQSTDSLGSSLSSQQGLGGHNHKAKS
ASNLDESDFGPLVGADCGVTDSSFGETSSIGSIKLTAGHFLLTKDQEKAIKAMTPEQEET
ASLLSSISHAPDTAYLPPSGYRLVSDTEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQAI
QGQEAETRDQVKKLQAMLRQANDQLERTMTEKQSLEESVKIGNEETDAKVSALMQRVQES
EALLSTLQQAFSEAKRNTQEQMAVLLKSREQVADELSRLQRDNESLQGKHRLHLELQQQE
DFQMPDTVQDLQGLVLQYRDDVVALRTAADHVEEKLKAEILFLKEQIQAEQCLKENLEDT
LQLEIEGCKEEIDILEASFSSLKMELERVKAEKDKLQSCLAEKTETLDSVQAVKMSLEHQ
FREVATAKSALESQVLDERDKAQRLQTELDVSEQVQKDFVKLSQTLQVQLERIRQAESLD
RIKVILNDTNLTDINQLPET
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggccgagggttcccctctgtcgtcccaacatgacgaggtgcttcagcag
cgtgtggcggctctggagcaggagagggccgagttcatccggctcaagcagcagctggag
gccgagttcaaccagaagagagccaaattcaaagagctgtacctgaccaaggaacaggaa
cttaaaagacaaaccgaggccctggagaactcccaaagcgagctgagcgccgcgcatacc
cagctgtctcaggctcagtccgagatcgagaccatcaaagccgtggccactgtgtcggaa
aacaccaagcaggaagccatcgaccaggtccgcagccaatggcaggaggaggtggcctcg
ctgcaggccatcatgaaagatacagtgtgtgaatacgaggtccagttccaccagcgcctg
gagcaggagcgagcccagtggaaccagtaccgagaggcaatggagcgggagctgggcgac
ttgaggcgccgcctcacggagggacaggaggaggagaacctggaggacgaaatgaagaag
gctcaggaggatgcagagaagctgcgctccgtagtgatgcccatggagcaggagatcgca
gcactgaaggccaagctgaacagcgccgaggacagggtgaaggaactggaggcgtccaag
gtgaaggagctgaatcatgttctggaggctgagaagtcgtgtcgtacggacctggagatg
tatgtggctgtgctgaacacgcagaagtctgtgctgcaggaagatgcagagaaactacgc
aaagagctccatgatgtgtgtcacaaactggagttggagcggcagcagcacaaccagctg
aagcagacgtggcagcgggccaacgaccagttcctggagtcccagcgcctcctgatgagg
gacatgcagagaatagagagcgtgctgtcctccgaacagctccgccaggtggaggagatg
aagaagaaggaccaggaggaggatgagaaggagaggctgagtctggtgaaggacctgcag
gaggacgatggaggagacaacactgagcctctggaggacttcctggggctgagcgttgag
gagcctccgaccaaccacagcgctcatggatccatacactccttagacactgacatcgtt
gccggcagcccttcggacccctacaaggacaacctgcggagggtccagtcgaccgacagc
ctcgggtcctcgctgtcttcacagcagggactcggcggacacaaccacaaggccaagtcg
gccagcaacctggacgaatcggactttgggcccctggtgggggccgactgcggcgtgaca
gacagtagttttggtgagacctcgtccatcggctccatcaagctgacggcgggtcacttc
ctgctgactaaggaccaggagaaagcgataaaagccatgacgccggagcaggaggagacg
gcgtcgctgctgtccagcatctcccacgctccggacaccgcctacttaccgccgtccggc
taccgactcgtcagcgacaccgagtggaacctgctgcagcaagaggtaaaaaacgctggc
aggaagctcggccgacgctgcgacatgtgctccaactatgagaagcagctgcaggccatt
caaggacaggaggccgaaacacgagaccaggtgaagaagctgcaggccatgctgcggcag
gctaacgatcagctggagaggacgatgacggagaaacagagtctagaagaatcagtaaaa
ataggaaacgaggaaactgatgctaaggtgtctgccctcatgcagagagtccaggaatca
gaagcgctgctcagcacactgcagcaggccttcagtgaggctaagaggaacacacaggag
cagatggcggttctgttgaagtcgagggagcaggtggcggatgagctaagccgactacag
agagacaacgagagcctgcagggtaaacaccgactgcatctagaactgcagcagcaagaa
gacttccagatgcccgacactgtgcaggatctgcagggcctggtgctgcagtaccgggac
gacgttgtggcgctgcggacggcggctgatcacgtggaggagaagctaaaagctgagatc
ctgttcttgaaagagcagatccaggcggagcagtgtctgaaggagaacctggaagacacc
ctgcagctggagatcgagggctgcaaggaggagatagacatcttggaagcgtcgttctcc
agcctgaagatggagctagagagggttaaagcagagaaggacaagctgcagagctgttta
gcagagaagacggagacactggacagcgtccaggccgtgaagatgagcctggagcaccag
ttcagagaagtcgccactgcaaagagtgcattagaaagtcaagttctggacgagagagac
aaagcccagcggctgcagactgagctggacgttagtgagcaggtccagaaggactttgtc
aagctttctcagactcttcaggtccagctggagcgaatacgacaggcagagtccctggat
cggatcaaagtaatcctgaacgacaccaacctgaccgacatcaaccagcttccagagaca
tga
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