KEGG   Xiphophorus hellerii (green swordtail): 116728955
Entry
116728955         CDS       T07363                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03030  DNA replication
xhe03410  Base excision repair
xhe03420  Nucleotide excision repair
xhe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116728955 (rfc3)
   03410 Base excision repair
    116728955 (rfc3)
   03420 Nucleotide excision repair
    116728955 (rfc3)
   03430 Mismatch repair
    116728955 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xhe03032]
    116728955 (rfc3)
   03036 Chromosome and associated proteins [BR:xhe03036]
    116728955 (rfc3)
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116728955 (rfc3)
DNA replication proteins [BR:xhe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116728955 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    116728955 (rfc3)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116728955 (rfc3)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116728955 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    116728955 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran Rep_fac_C
Other DBs
NCBI-GeneID: 116728955
NCBI-ProteinID: XP_032433203
LinkDB
Position
11:23203022..23207094
AA seq 356 aa
MSLWLDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLKELY
GPGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTHREFKVVLLTEVDRLTKDAQHALRRTMEKYMTTCRLILCSTSTSKVIGPIQSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRRALLMCEACRVQQYPF
SADQDVPEPDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIIKGLVEELL
NNCDGQLKTEVAHLAAYYEHRLQLGSKAIYHLEAFIAKFMAMYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtggctggataaatatcgaccgacgtctcttgggaaacttgactatcacaaa
gaacaagcgactcaactgaaaaacctggttcagtgcggcgactttcctcacttgttggtg
tacggaccatcaggagcgggaaaaaaaacccgcatcatgtgtttgctgaaagaactgtat
ggaccaggggtggagaagcttcgcatagagcatcaaactattgtggctccatcaaaaaag
aaaattgagatcaacataatagccagcaactatcacttagaggttaacccaagtgatgcg
ggaaaccaggatcgtgtggtgatccaggagctgattaaaactgtggcccagtcccagcaa
atccagtccagcactcatagagagttcaaagtggtgctgcttacagaggtggacagactt
actaaggatgctcagcatgccttgcgacgcacaatggagaagtatatgactacctgtcgt
ctcattctctgctcgacatccacctcgaaggtcatcgggccgatccagagcagatgtctg
gctgtcagagtccctctgccgagcacagaagaggtgtgcagtgttctgacgtcggtctgt
aaaaaggaaggtctgctgctgccgcctgagctggccaagcagatcagcgaaaagtcgggt
cgcaacctccgcagagctcttctgatgtgtgaggcgtgcagagtgcagcagtatccattc
tcagcagatcaggatgtgccagagccggactgggaggtctacctgagagaaactgctaat
gccatcgtcagccagcagagtcctcagaggttgttggaggttcgagccaggctgtacgag
ctgctgacgcactgcatccctcctgatatcatcataaagggtttagtggaagaactactg
aataactgcgacgggcagctaaagacggaggtggcccacctggctgcttactatgagcac
cgactccaactgggcagcaaagccatctaccacctggaggcgtttattgcaaagttcatg
gccatgtacaagaagtttatggaagacggcctggacgccatgatgttttga

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