KEGG   Xiphophorus hellerii (green swordtail): 116728968
Entry
116728968         CDS       T07363                                 
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B
  KO
K16482  centriolar protein POC1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116728968 (poc1b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xhe03037]
    116728968 (poc1b)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    116728968 (poc1b)
Cilium and associated proteins [BR:xhe03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   116728968 (poc1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Aladin ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_DCAF4 Tricorn_2nd Beta-prop_Nup120_160 WD40_like Beta-prop_ACSF4 DUF948
Other DBs
NCBI-GeneID: 116728968
NCBI-ProteinID: XP_032433220
LinkDB
Position
2:28370883..28415764
AA seq 506 aa
MGSVLDDPSLERHFRGHKDVVTCADFNPNQNQLATGSVDRTLMIWNLAPKARAFRFVGHQ
DTVTGLQFSPSGRLLASSSKDRTVRLWTLSLKGESSVLKGHTGAVRSVSFSHDGYSLVTA
SDDKSVIVWSVPRRCYVYSLSQHTNWVRCARFSPDGRLIVSCGDDRTVRLWDTSTKCCIN
TFTNCGGSLTFVDFNSSGTCIASSGDDRCLKIWDLRTNKLIQHYQVHSGGINSFSFHPSN
NYLISGSSDRTVKILDLLEGRLIYTLHGHKGAVIAVAFSRLGDHFASGGTDCQVLLWRTN
FDRKRYRDVLLQHSQRSTPDPPPHLSDIHPRAPHAHLHRSQPTGIQINPVVTNMMSSDPQ
VVEVSRYLHDNKADFLARRVTGSRAEVWTRGESASRAGSTSGNQTGSDGPRRGKGKAEEE
DMAQTRPLNVLPGRPSSLDFTLQHIVRQLDVLTQTVSVLEERLTLTEDKMKECLQHQSQI
LKDLKTSGQRSRTASEEMDESIFHFT
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgggatctgttctggatgatccgtctctagagagacacttcaggggacataaagatgtt
gtcacctgtgcagacttcaatccaaaccaaaaccagctggctacaggatcagtggataga
accctgatgatctggaacctggccccgaaggcgagggcctttcgttttgtcgggcaccag
gacaccgtcacggggctgcagttctccccatccgggcgtctgctggcttcttcgtccaaa
gacagaacggttcgattgtggacactttccttaaaaggagagtcttcggtgttgaaaggc
cacaccggcgcggtgcgcagtgtgtctttctcccatgatggctacagcctggtcactgcg
tctgatgacaagtcggttatagtgtggagcgtcccacggcggtgttacgtctactccctc
agccagcacactaactgggttcgctgtgccagattttctccagacgggaggctcatagtg
tcctgtggggacgaccgcaccgtccgtctctgggacacgtccaccaaatgctgcatcaac
actttcaccaactgcggaggctcgctcacgtttgtcgacttcaactccagcggcacctgc
atcgcctcgtccggagacgacaggtgtcttaaaatctgggatttgcgaaccaataagctg
attcagcactatcaagtccacagtggaggaatcaatagtttctccttccatccgtccaat
aactacctaatcagtggctccagtgaccggacggtgaagatcctggacctgctggagggc
cggctcatctataccctgcatggacacaagggagccgtaatcgctgtggccttttccagg
cttggagatcactttgcctcaggcggaactgattgccaggttctgctgtggaggacgaac
tttgaccgtaaacgttaccgggacgttctgctacaacacagccagaggtccacccccgat
cctccgccccacctgtctgacatccaccccagggcaccccacgcccacctccaccgctca
cagcccacgggcattcagatcaatccagtcgtgacaaacatgatgtcctctgatcctcag
gtcgtagaggtcagccgatatctccatgacaacaaggcagacttcctggcacgtcgtgtc
accggatcgagagcggaagtgtggacccgaggtgaaagtgccagcagggcggggtcgact
tctgggaaccagaccggctcagatggcccgagaagaggaaaaggaaaggcggaggaagag
gacatggcgcagacccgcccactgaacgttctccccggtcgtccatcaagtctggacttc
accctgcagcacattgttcgacagctggacgttctcacgcagaccgtttccgtgttggag
gagcgtctcaccctaacagaggacaagatgaaggagtgtctccagcatcagtctcagatc
ctgaaggacctgaagacatcgggacagagatccaggacggcgagcgaagagatggatgag
tccatttttcatttcacttaa

DBGET integrated database retrieval system