Xiphophorus hellerii (green swordtail): 116729001
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Entry
116729001 CDS
T07363
Name
(RefSeq) sodium/calcium exchanger 2-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04260
Cardiac muscle contraction
xhe04261
Adrenergic signaling in cardiomyocytes
xhe04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116729001
04020 Calcium signaling pathway
116729001
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116729001
04261 Adrenergic signaling in cardiomyocytes
116729001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116729001
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116729001
Transporters [BR:
xhe02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
116729001
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Others
116729001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
116729001
NCBI-ProteinID:
XP_032433272
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Position
11:complement(21546820..21573927)
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AA seq
931 aa
AA seq
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MGLLFFHPGPLFFVFFFLLLLCHPCISIRPQVLERASAPEQSQSSDNSTESEKKKCAGVV
VCKPGILLPVWEPLDPPVGEQAGRAIVYFLSLMYIFLGVSIIADRFMASIEVITSQEKEV
TITKPDGETTVKTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFNAGELGPGTIVG
SAAFNMLVIIGLCVSVIPDGQSRKIKHLRVFFITAFWSIFAYIWLYLILAVISPGIVEVW
EAVVTLLYFPICVMLAWIADRRLLFYKYMHKRYRADKRHGIVVEMEGDDSPPRIDVIMDR
KLSDGSPGPGNSSSVTVSVQTGSELDQNKDEAVRILKDLKEKHPDKYLDELIEMANYSAL
VHRKKSRAFYRVQATRRMIGAGNILKKHAAEQKRRASGQDADKATCSHICFESVQYQCTE
NCGSVTLWVVLDGGTGQNTFYVDYCTENGSANAGSDYEFNEGTLTFKPGETRKEIKVGIL
DDDMFEEDEHFFVRLQNLRLEEGGSEGTGSPPKATLVEPLLATVTILDDDHAGIFTFGQQ
VLRVSESTGMLTVTVLRNSGSRGTVAVPYHTEDGSAKAGVDYEEARGEVEFTNEQTSQTL
QICILNVEEYEKQENFFVVLEDPQWLKRGISALLLNQGNPTPEEEEARRISEMGKPILGE
HSRLEVIIKEACDFKTPNGVIDQNTVDHLLQDTNLAEVIGTHSWKEQFIEAVTVSAGDDD
EEGQEQRTPNCFDYFMHILCVFWKILFAFVPPTEYWNGWACFIVSISVIGLLTAIIGDLA
SHFGCTVGLRDTVTAVVFVALGTSLPDTFASKVAATQDQYADASVGNVTGSNAVNVFLGI
GLAWSVAAVYWEVKGKVFRVDPGSLAFSVTLFTIFAFFSMGVLMLRRRPSIGGELGGPRI
PKVLTSLLFFGLWFLYILFSSLEAYCHIQGF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggggctccttttctttcaccccggcccactcttcttcgtcttctttttcctcctcctc
ctgtgccacccctgcatttccatcaggcctcaagtcctggagcgagcgtctgcgcctgaa
caatctcagtcctctgacaactccacagagtctgaaaagaagaaatgtgcaggtgtcgtg
gtgtgtaaacccggcattctgctgccagtctgggagcctcttgaccctccagttggggaa
caagcagggagggcgattgtgtacttcctctctctcatgtacatattccttggagtatcc
atcattgcagaccgcttcatggcatccatagaagtcattacatctcaggagaaggaggtg
accattaccaaacctgatggggaaaccacggtgaaaaccgtgcggatctggaatgaaacc
gtgtccaacctgacactcatggccctgggctcctccgcaccagagatcctgctctctgtt
attgaggtgtgtggacacaacttcaatgctggggagctcggcccaggcaccatagtcggc
agtgcggcctttaacatgcttgtgataattggtctgtgtgtgtcagtaattccagatgga
cagtctcgcaagatcaaacacctgcgagtgttttttatcacagctttctggagcatcttt
gcatacatttggctctacctcattctggccgtcatctccccagggattgttgaggtttgg
gaagctgtagtaacactgctgtattttcccatctgtgtgatgttggcttggatcgctgac
cgccgcctgctcttttacaaatacatgcataagagataccgtgccgacaagaggcatggg
attgtagtggaaatggagggggacgattcccccccacgcattgatgttatcatggacaga
aagctgtcagacggcagtccaggccctggaaactcctctagtgtgactgtgtctgtgcag
acaggcagtgagctggaccagaacaaagatgaggcagtccgcatcttgaaagatctgaag
gagaagcatccagataaatacctggacgagctgatcgagatggccaactactctgccctg
gtccaccggaagaagagtcgtgccttttatcgtgtccaagcaacacggaggatgattggt
gctggaaacattttaaagaagcacgccgcagagcagaaacgccgcgcgtcgggacaagat
gcggacaaggcgacatgctcacatatctgttttgaaagcgtccagtaccaatgcacagag
aactgtggctctgtgaccctgtgggtggttctcgatggaggcacaggccaaaacacgttc
tatgtggactactgtacagaaaacggatctgccaacgctggatcagactatgagttcaac
gagggaactctgacattcaaaccaggggaaacccgaaaagagatcaaggtggggattttg
gatgatgacatgtttgaagaggatgaacatttctttgtgcgtcttcaaaatctgaggtta
gaggagggagggagtgaagggaccggttctccgcccaaggctacactggtggaacctctt
ctggccacagtcaccatactggacgatgaccatgctgggatctttacctttgggcagcag
gtgctgcgagtgagtgagagcactggcatgctaacggtgacagtgttgaggaactcgggc
tccaggggcacagtggctgtgccgtaccatactgaggatggtagtgccaaggctggagtg
gactatgaggaggccagaggggaggtggaattcaccaatgaacagacaagtcagacatta
cagatatgcattttaaatgtggaggagtacgaaaagcaggaaaacttctttgttgtgctt
gaagacccccagtggctgaagagaggaatttctgctctactactgaaccagggcaaccca
actcctgaggaggaagaggccaggaggatttctgagatgggcaaacctattctaggagag
cacagcagactagaagtcatcataaaagaagcctgtgattttaagactcccaatggagtc
atagaccagaacactgtggatcatctcctccaagacacaaatctagcagaagtgattggg
actcactcatggaaagagcagttcattgaagcagtcacagtgagtgcaggtgatgatgat
gaggagggacaggagcaaagaacgcccaactgcttcgactattttatgcacatactttgc
gttttctggaaaattttatttgcttttgtcccgcccaccgagtactggaacggctgggcg
tgcttcattgtgtccatctctgtcatcggcctcctaaccgccatcatcggagacctggcg
tcgcattttggctgcactgttggcctcagagacactgtgactgctgtggtctttgtggcg
ctggggacttcacttcctgacacttttgccagtaaagtggctgccactcaggaccagtat
gcagacgcgtccgtgggaaacgtgacgggaagcaacgcagtcaatgtgtttttgggcatt
ggcctggcctggtccgtggctgcggtgtactgggaagtgaaagggaaggtcttccgcgtc
gaccctggttccctggccttctcggtcacactcttcactatttttgcgttctttagcatg
ggagtgctgatgctacgcaggaggccgtccataggaggcgaactcgggggtccaaggatt
cccaaggtcctcacctcgctgctcttcttcggactctggttcctgtacatcctcttctcc
agcctggaggcctattgccatatacaaggattctga
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