Xiphophorus hellerii (green swordtail): 116729210
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Entry
116729210 CDS
T07363
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116729210 (rbm39)
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
General mRNP proteins
116729210 (rbm39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
116729210
NCBI-ProteinID:
XP_032433881
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Position
1:20957668..20963354
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AA seq
499 aa
AA seq
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MADDFDVEAMLEAPYRKDENKSYHANGHDEHGKKKRRSRSRSRSPGSKKKKSRSRSRDRK
KSKKRSRSKDKKRSRSRERHRSGSKSRDRAGRYKARKSPIRKRSRSRSPFKKEKSPVRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGGIPPPAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWASEIQDDVI
DECNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTY
HNLFPDSVTAKQLLMPSRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgattttgacgtcgaggccatgctggaagcgccttacagaaaggatgagaac
aagtcctatcatgcaaatggacacgatgaacacggcaagaagaagagaaggagtcggagt
aggagccgcagtccaggctcaaagaagaagaaaagccgtagcaggagcagagacaggaag
aagagcaagaaaagaagcaggagcaaagataaaaagcgcagccgcagcagggagcgccat
cgcagcggctccaaaagcagggatcgggctgggcgctacaaagcacgcaagagccccatt
cgaaaacgttccagaagtcgaagtcccttcaaaaaagaaaagagtcctgttaggcaacca
atcgacaatctgacaccagaggaaagggatgcccgcacagttttctgcatgcagcttgct
gctagaatcagagctcgtgacctggaggatttcttctcagctgttggaaaggtcagagat
gtgagaatcatctctgatagaaactctcggaggtcaaagggtattgcatacatagagttt
gtggagtcgtcttctgtaccactggcaattggactaactggtcagaggcttttaggtgtg
cccatcattgtccaggcttctcaggcggagaaaaatagagctgctgctgcagccaataac
ctacagaagggcagcgcaggtccaatgagactttatgtgggttcactacattttaacatc
actgaagaaatgctgcgaggaatttttgaaccttttggaaagattgaagggatccaactc
atgatggacagcgagactgggagatccaaaggatatggtttcatatcgtttgcagatgca
gagtgtgcaaagaaggcgttggagcaattgaacgggtttgagctggcaggacgtcccatg
aaggtgggccacgtcacagaacgttcagattcttccactgctagttctttcctggacaac
gatgagctggagaggactggcatcgaccttggcacaacaggccgtctgcagctcatggct
cggctggcggaaggaactggcttgaaaatcccccctgctgctcagcaggctctgcagatg
actggatccataccttttgggggcatacctcctccagcagttcctactcctgcaccaagc
caagccttgaacctcccatcacagccgctggccacacactgtctgcagctgtccaacctg
tttaacccgcaggcagaaaacgatcccaactgggcctctgaaatccaagacgatgtgatt
gatgaatgcaacaagcacgggggagtcgtacacatctacgttgataagaactctcctcag
ggtaatgtgtatgtgaagtgtccctcaatacctgcagcaatggcaacagtaaatgcactt
catggacgctggtttgcaggtaaaatgataacagctgcttatgttcctttaccaacctac
cacaacctcttcccagattcagtaacggcaaagcagcttctaatgccttcacgtcgatag
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