Xiphophorus hellerii (green swordtail): 116729270
Help
Entry
116729270 CDS
T07363
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03022
Basal transcription factors
xhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116729270 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
116729270 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116729270 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116729270 (gtf2h3)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116729270 (gtf2h3)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116729270 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
116729270
NCBI-ProteinID:
XP_032433573
LinkDB
All DBs
Position
12:15944615..15948757
Genome browser
AA seq
300 aa
AA seq
DB search
MASEDELNLLVIVVDVNPIWWGQQGQREPEFTLCKCLDAVMVMGNSHMAMTRTNRLAVIA
SHCQDSHFLYPSKTWKSGDSGGDEISSSRDGKYELLAVANNLIAEEIRNIMAKTEVTGNS
TDTLLAGSLAKALCYIHRVSKELEVGQEMKSRILVIKAADDCALQYMNFMNVIFAAQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggatgaattgaatctcctggtcatcgtggttgatgtgaatcccatctgg
tggggtcagcaaggtcagcgtgagccagagttcactttgtgcaagtgtctggatgcagtc
atggtgatgggaaattcccatatggcaatgacaaggacaaacaggctggccgttatcgct
agtcactgtcaagacagtcacttcttgtatcccagtaagacttggaaaagtggagacagt
ggtggggatgaaatttcctccagccgggatggaaaatacgaacttctagctgtcgccaac
aacctcattgctgaagagatcaggaatattatggctaaaactgaagtgacggggaattca
accgacaccctgttggcaggatctcttgccaaagccctctgctatattcacagggtctca
aaagagttagaagttggacaggagatgaagtcaaggatattggtgataaaagcagctgat
gactgcgctctccaatacatgaacttcatgaatgtgatttttgctgcacaaaagcagaac
atcctgatagatgcgtgtgtgctggactcagactcggggctgcttcagcaggcttgtgac
ataacaggaggcttgtacctgaagataccgcagaaagtagccctggctcagtaccttctg
tgggtgttcctgcccgactcggagcagcgctcccagctggtgctgccgccgcctgcccac
gtggactacagagctgcttgtttctgccaccgtaacctcatcgaaatcggttatgtctgc
tctgtttgtctgtcgatattctgcaacttcagccctatttgcacaacatgcgagacggcc
tttaaaatccagctacctcagatggtcaaacctaaaaagaagaaattgaagcaagcagct
tga
DBGET
integrated database retrieval system
