Xiphophorus hellerii (green swordtail): 116729320
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Entry
116729320 CDS
T07363
Symbol
clip1
Name
(RefSeq) LOW QUALITY PROTEIN: CAP-Gly domain-containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116729320 (clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116729320 (clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116729320 (clip1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116729320 (clip1)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
116729320 (clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
CC149
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
116729320
NCBI-ProteinID:
XP_032433650
LinkDB
All DBs
Position
12:complement(16014456..16042163)
Genome browser
AA seq
2210 aa
AA seq
DB search
MSTAKPTGIKAPTKIARPPGTGAPKTNPPTAKPGVADKAAVGDGKNAEDEFQIGERVWVN
GNKPGYIQFLGDTQFAPGKWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRPSKLSRT
EGDANGTQTAPQSRAPSPAPSVGSVASQTPAAKSTLPSSATTAKKASSPAPATAEPSNLA
KTNSGSVSNLSESGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEP
LGKNDGAVAGTRYFQCQPKYGLFAPVHKVSRIGFPSTTPAKAKTTARKVVTTPAGLKKSP
SSSSVSTMSSVASSVSTKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIEQLMGER
DMERAEVAKANSHVGEMEQEISLLREDQEQMESKMDQLRSLVEAADKEKVELLNQLEEER
RKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQNLLFEKTKAEKLQRELEDTRVATV
SERSRIMELERDLLLRNREVTGLKLRLEMQQNSEDPSGTLSPILEENNSLRDQLSAEEAK
HQEEVETYREKLEAQEKIHSEAVAQLQATSVMLSSDKEQLQMRLSQAEKDNVDTVELWRS
KMESAMEELKASLSNGADAQIEEFAETKSDLERLKVEHEIALEEVAAKHEAKASALTQEM
QAQLSSLSEEKERLEESLRSSVEKAEEQHLVEMEDVLGKLHAAETRIKELEEKETRLAQQ
FQDKDTETKEHQGDMATLRRQLAQSNQECVALKSQLEELQNQGDGNSAKVVELSSQLEGK
EQEVVTLQESLTTLQQQRDVMDSEIKSLNLRLRRSTEELNKAVETMKETIENLVKKNEHC
TSLANESETLGSQLAVMERKLKSADEKLEQLSKDKSKLENDISDMMKASGDNSVQLTKMN
EDLKQKERRLEELQNQMAEEKEKMAVLEEKLQKEQSSKGHETSALQEKIITLENALKQSK
SQVEDLKASHEKSLSEASKLHLKEFEILQTQFGQLKMELSSSKDKTRELEKTVSELQTYK
EQAQRLSAELDTYKRDVDNMSKKLDKQSLDLENMFKQSEDHKAEKGNLERQLSEMQNKVS
VTEISCKEVSVQNEELLATNDKLSKLQEELQTNTKHLDEERTSLKKELENLKHLLQEAET
ENKDLHRGKGEYLTQIKELQRENAEMNDSVLKHQLDIQQTESKKKQLLEDYENVCKEKSR
LEEDLKETESKFTSERDDLILERDSAKNARKSLDTKNAELQAKVKSLNLKKEDLKMKNVQ
LQTLVETLTNEKAELSSEVGAAALEKKNQEMQKEELQNKLCQTKRDLESQIRECEELKAS
KASLAQMLEEFKTNSQVTDSERLTLLQEKEDLLAFQRKVSGEKDDLFRELQELKEKLHVL
TEQLSLSHEKYNAALSSFEQEKQALRLQNSEMEMTLHDLRKEKMSLDSALEQQKMDFERL
EEEKGELEGKYTKALSEKDTLSVEREKLAGDNRTTRGQLDGYSRTNADLLQQKSHLEKKL
EETKHQKDELEAKITTLEREKTDLQNKLQKYCSDIEILEKTKIELVVDRNKVKAEFEKSN
LELSQQVDNLKKDHHHLQSLQTEAEQKVHSFQEENQVLLQEVQELKKQITSLSEAKDLLE
TTLQAENCEITKAKADKDGLSKQIEELQNTLSKVMQENDKISFDRKNADEQNKSFKAEME
SLKGQLKQQKQENHQLGQDREQLSTRLEEMGKQMTLLTSVKEKLLASQSELKQETSSLCA
KKETLLAEQSELLQKVECLQASNKQLQAELQAQKIVNENLEKQYKSALEEVSASAVVKEE
ISSSVTQLSAQKDTLQAERDEAVQQVRALELQLNNAISKQLEASGNAADALEQLVKEKEA
LLKEKNEAQSLVEALQRSKDETQTQLETLRKGNLKYQEDLNTSKEQLCTETQRLKSLCQE
VEELKEAASVTSQTLQMLQEENKRLSQELANNHKDQGDLVRLTDEHSKLKKESEELKQSL
PNNIFSENALKEQLSREKVALQQSIHKNSALVAEKDQQVEKLKSELVAVREESASIKTLQ
NTIETLEQDKANLQDRVKRLEKDLAVRPDISLTSGDAVLDQLREDKETAESQEAVEFLNS
VIVDLQRKNEELKDKLEKMAAAALNGNSPSELDNNYDKQPEKKKPPPRKFCDICDCFDLH
ETEDCPLQEQMPDSPPHTTYHGSKGEERPYCYTCEVFGHWTESCTDDQTF
NT seq
6633 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaagcccactgggatcaaagctcctaccaagatagctagaccacctgga
actggagccccaaagaccaacccacccacagctaaacctggtgtggctgacaaagcagct
gttggagatggcaagaatgctgaagacgagttccagattggggagagagtatgggtgaat
ggaaacaagcctggctacatacagtttttgggagatacgcagtttgctccaggaaagtgg
gcaggaattgtcctggatgaaccgatcgggaagaatgatgggtctgtggcaggggtgcgc
tacttccaatgtgaagcccttcgagggatatttacacgcccttccaagttgtctcgcaca
gaaggtgatgctaatgggacccaaactgcgccacaaagccgcgcaccatctcccgcccct
tcagtcggaagtgtggcctcccaaacccctgctgctaaatcaaccttgccctcaagtgct
accaccgccaagaaagcctcttcccctgcaccagctacagcagagccttctaacctggca
aaaacaaacagcggctccgtctccaacctctctgagagtggctccgtcaagaagggggaa
agggagctgaagatgggcgatcgtgtgctggttggtggcacaaaggcaggagtggtgcgc
ttccttggagaaactgattttgccaaaggcgagtggtgtggcgtggaactagatgaacct
cttggaaagaatgatggggcagtggctggcactagatattttcagtgccaacctaaatat
ggcttatttgctccagttcataaagtctcacgtattggcttcccctccacaactccagcc
aaagcaaaaacaacagctcgaaaagtagtgaccacaccagccgggctgaagaaaagcccc
agttcctcttcagtcagcaccatgagctcagttgcgtcctccgtcagcaccaagccaagc
cgaacaggcctgctaactgaaacgtcatctaggtataatcgaaagatttcgggcaccaca
gcactgcaggaggccctgaaagagaagcagcagcatattgagcagctaatgggtgagagg
gacatggaaagagctgaggtggccaaggccaatagccatgttggcgagatggaacaagag
atcagcttgctcagagaagaccaggagcagatggaatcaaagatggatcagctccgttcc
ctggtggaagctgcagataaggagaaagtagaactactaaatcagctggaggaagagcgc
aggaaagtggaggatcttcagtttcgagtagaggaggcttgtattaccaaaggagacctg
gagacgcagaccagactggagcatgcccacattaaggagcttgaacagaacctgctcttt
gaaaagaccaaagctgagaaactccaaagagagttagaagacactagggttgctacagtg
tcggaaagatcccgtatcatggaacttgagcgagaccttttactgcgcaacagagaagtg
actggcctgaagctgcgtcttgagatgcagcagaactccgaggacccgagcggcaccctg
tcccctatcctggaagagaacaactctcttagggatcagctttcagctgaagaagctaaa
caccaagaagaggtcgagacatacagagaaaagctggaagcgcaggaaaaaatccacagt
gaggcggtcgcccagcttcaggcgacatctgtaatgctgtccagtgacaaagaacagcta
cagatgcgtttaagccaagcagagaaggacaatgttgacaccgttgaactgtggcgttca
aagatggagtctgccatggaagagctgaaggcatctttgagcaatggtgcagatgctcag
atagaagagtttgcagaaaccaaaagtgacctggaaaggctcaaggtggagcatgaaata
gctttagaagaggttgcagccaaacacgaagccaaggcctcagctttgacccaggagatg
caggcacagctgtcgtctctgtctgaggaaaaggagcgactggaggagtcactgcggtcc
agtgtcgagaaagcagaagagcagcacctggtggagatggaggatgtccttggaaagctt
catgctgctgaaaccaggataaaggagctcgaagaaaaagaaaccaggctggcacaacag
tttcaggacaaggatacagaaaccaaagagcatcagggagatatggcaactctacgcagg
cagttagcacaaagtaaccaggagtgtgtggctctgaagagtcaattagaggagctccag
aaccaaggagatgggaatagtgcaaaggttgtggaactgagctcacagttggagggtaaa
gagcaggaagtcgtcaccttacaggagagtctgactacactacagcagcagagggacgtc
atggacagcgagattaaaagcctgaatctaaggctgcggcgaagcacagaggagctgaat
aaagcagttgaaacaatgaaagaaacaattgagaatctggttaagaagaacgaacactgc
acgtccttagctaatgaatcagagaccctaggaagtcagcttgctgtaatggagagaaaa
ctgaagtctgcagacgaaaagcttgagcagttgtcaaaggacaagagcaagttggaaaat
gatatttcagacatgatgaaggcgtctggtgacaattcagtccagctcacaaaaatgaat
gaagatctcaagcagaaggaaaggagacttgaggagttacagaatcagatggcagaggaa
aaagagaaaatggcagttttggaagaaaagctccagaaagagcagtccagcaaagggcat
gaaaccagtgctcttcaggagaagataattaccttggaaaacgctcttaaacaaagtaag
agtcaggttgaggatttgaaggcctcacatgagaaatccctctctgaggcctccaagctc
catttgaaggaattcgagattctgcaaacacaatttggtcagttgaagatggagctttcc
tcctccaaggacaaaactcgagagctggagaaaactgtgtctgagctgcagacatacaaa
gaacaggcccagcggctttctgctgagcttgacacctacaagcgtgatgttgacaatatg
tcaaaaaaactggataaacagagtcttgatctggaaaacatgtttaagcaaagtgaagat
cataaagctgagaaaggcaatctggagaggcagctttctgagatgcaaaataaagtttct
gtcactgagattagttgcaaggaggtttcagtgcagaatgaagagctgctggcaactaat
gacaaactctcaaaacttcaagaggaattacagaccaataccaaacatttagatgaagag
aggacttccctgaagaaggaactggagaatctcaaacacctgctgcaggaagcagagacc
gaaaacaaagacctgcatcgtggtaaaggtgaatatttgactcaaattaaggagcttcaa
agagaaaatgctgagatgaatgactctgtcttaaagcatcagttggacatccagcaaact
gagtctaaaaagaagcagctgcttgaggattatgaaaatgtttgcaaagagaagagccgg
ctggaagaggacctcaaggaaacggagtcaaaattcaccagtgaaagagacgatctgata
ttagaacgtgattctgccaaaaatgctcggaagtctcttgacactaaaaatgctgagctg
caggcaaaagtgaagtcattgaatttaaaaaaagaagatcttaagatgaagaatgtgcag
ctccagactctggtagaaaccctgacaaatgagaaagccgagttgtcatctgaagtcggt
gctgctgctttggagaaaaagaaccaagagatgcagaaggaggaactccaaaacaaactc
tgccaaaccaagagagacttggagagtcaaattcgtgaatgtgaagagcttaaagcctct
aaagccagcttggcccagatgcttgaagaatttaagacaaacagtcaagtgacagattct
gaaaggcttaccttgttgcaggagaaagaagacctgcttgcattccagaggaaagtgtct
ggggagaaagacgaccttttcagagagctgcaagagctgaaggagaaactccatgtcctg
acggaacagttgtccctttctcatgaaaaatataatgcggcgttatcatcttttgagcag
gagaaacaagcattgcgtctacagaactccgaaatggagatgacacttcatgacttgcgt
aaagaaaagatgagcctggattcagctcttgagcagcagaagatggattttgagcgtttg
gaggaggagaagggagagttggaaggaaagtataccaaggctttatctgagaaggacact
ctttctgtggagcgtgagaagctcgctggtgataatcgcacaactcggggccagttagat
ggttatagcagaaccaatgctgaccttcttcaacagaagagtcatctggaaaaaaagctt
gaagaaactaagcatcaaaaagatgagctggaagccaagatcaccactctggaacgagaa
aagactgacctgcagaataaactgcagaagtattgctctgatattgaaattctggaaaag
accaaaattgaacttgttgttgatcgtaataaagtaaaagcagagtttgagaagtccaac
ttagagctttctcaacaggtagataaccttaaaaaggatcatcatcatcttcagtctctg
cagaccgaagctgagcagaaagtccattctttccaggaggagaaccaagttctgctgcag
gaagtccaggagttaaaaaaacagataacatctctgtcggaggcgaaggacctgcttgag
acgactctacaagctgaaaactgtgaaatcactaaagcaaaagctgacaaagatggtttg
tctaagcaaattgaggaacttcagaacactttgtccaaagtaatgcaggaaaatgataaa
atatcttttgaccgcaagaatgctgatgaacaaaataagtcttttaaagcagaaatggaa
tctctgaaaggacaactaaagcagcaaaagcaagaaaaccatcaattgggccaagatagg
gaacagctgtcaactaggcttgaggaaatgggcaaacagatgactctattgacatcagtg
aaggaaaagcttttggctagtcagtctgaactgaagcaggaaacatcttcgctttgcgcc
aaaaaagaaacattactcgctgaacagtcggagcttcttcaaaaggtggagtgtttgcaa
gcaagcaacaaacagctgcaggctgaactccaggcccaaaagattgtgaacgaaaactta
gaaaaacagtacaagagtgctctcgaggaggtgtctgcgtctgctgtggtgaaagaagaa
atatcctccagcgttactcagctgtcggctcagaaggacaccctgcaggctgagagggat
gaagccgtccagcaagtcagggcgctcgagttgcagctaaataacgctatttctaagcag
cttgaggcttctggtaacgccgctgacgctctagagcagctcgtaaaggagaaagaggct
ttgctgaaggaaaaaaacgaagctcagtcattggtggaagcactgcagcgctccaaggac
gaaactcagactcagctggaaactctgaggaaagggaatttaaagtatcaagaagacctg
aacacatccaaagagcagctttgcacagaaacacagaggctgaagagtctttgccaggaa
gttgaggagcttaaagaagcagcatctgtgacgtcgcagactctacagatgcttcaagag
gaaaacaaaaggctgtctcaggaactggcaaacaatcacaaagaccagggagatctggtg
aggctaactgatgagcactcaaaactcaagaaagagtcggaagagttgaaacaaagcctg
ccaaataacatcttcagtgaaaacgctctgaaggagcagctgagtagagagaaggtcgcc
ctccagcagtccattcataaaaacagtgccttagttgcagaaaaggaccagcaggtggag
aaactgaagagtgagttggttgcagtgcgggaagaaagtgcctctataaagacgctccag
aatacaatcgagactttggaacaggataaagctaatctacaggatcgcgtaaagagactg
gagaaggacctcgctgtcaggcctgatatcagcctgacctcaggagatgccgttttggac
caactgagagaagataaggagactgcagagagtcaggaagcggttgagttcttgaattca
gttattgtcgacctccagaggaagaatgaagagctcaaagacaaactggagaaaatggca
gctgctgccctcaatgggaatagtccgagtgaattggataataattatgacaagcagcca
gaaaagaagaaacctcctccgaggaagttctgcgacatttgcgactgcttcgatctccac
gagacggaagactgcccgctacaggagcagatgcccgactcgcctcctcacaccacctac
cacggcagtaagggtgaagagcggccatactgctacacctgcgaggtcttcgggcactgg
acggaatcctgcaccgacgaccagaccttctaa
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integrated database retrieval system
