Xiphophorus hellerii (green swordtail): 116729351
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Entry
116729351 CDS
T07363
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116729351
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116729351
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116729351
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Other domain-containing proteins
Others
116729351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
116729351
NCBI-ProteinID:
XP_032433706
LinkDB
All DBs
Position
12:complement(11407673..11439087)
Genome browser
AA seq
2257 aa
AA seq
DB search
MGSKSKNKKGGDQDEDDEKKKKKDKKKKGSGKDDSNEDTKKTKGKKKKIENYVEIYENEL
RNYEPELQENYEDEYHKKKVYEVVTITGDENGAGTDANVFITLFGDYGITPKIHLASNTE
KKSRTAFERSKTDVFRIRTHNVGHIKKIRIEHDNTGMNAGWFLDRVVITDVIRPHLRFYF
ACNNWLSKEEGDGLFARDLLGSMDQMDMPKYNKYIVSVFTADMKGSGTDADVFINIFGEF
GDTGERRLDSDKNNFEKATEDKFTIDAPNLGKIRKITIGHNNKGSSAGWFVDKVILDDMG
NKVVYEFPINRWFALDEDDGKIQRDILVGADQPTGIVYNVQIVTGNIRGAGTNSKIHIVM
HGTKGLKNSGKVFLEGGKFERGLTDIFNVEIAALLSPLSRVTIGHDNDGVSAGWYCEKVV
VYCPFTGIEQTFPCGKWLDDEEGDGLIERELYEMVSLRQRRQKKHPWSLWIWTTDMPNAG
TDADISFQVYGEKNKSDEIRLDNKSDNFEQGQVDKFMVELPDLGKLTKLRIWHEKRNPFA
GWHLSKVTLMKTLTKEKYTFPCERWLDINEDDNEVVRELPACGDLIAEPLPVIKYRLTVC
TGDVSGSGTDASIFINLIGDQGDTGERQLINCKNNVNKFEKGNMDEFIVEAVTIGRIRRL
RIGHDGKGGGCGWFLDKVNVREEGKAEAHAVEFSCSRWLDRNEDDGQITRELVPFVDGQR
LYNLGYQIVVKTGDIPGGSSDSNVFVKLYGDKGDTDKMMLVVSTNNLGNYFETGRVDIFT
VETFDIGQINRLMIGHTNKGMRAGWFLDSVQIVVPVQGKNYMFPSHRWLCKDEADGKTEV
EIYPSEILEVEQLMNYEVTVVTGDVMFAGTNARVFIQIYGEKGKTETITLENRSNNFERN
TTEIFKFEAKDVGKIFKIRIGHDGSGIGSGWFLESVDVKHLILTLVPKEKKKDDKKKKKK
KKKDEEDEDEDGGEEMQEVVLPYRFPCSRWLSSGEEDGELVVELLPEDADEDLEVNTYEV
CVFTGDMMGAGTDAKVYINIYGENGDTGERLLRNSDNLNKFERGQEDVFIVTAIDLLTLK
KLRIRHDNTEPHSSWYLDRVEIVDTKEDITYYFPCNRWLAVDEDDGQIARELVPVDEAFM
RQDEDEEGTSATLGLEQKSMSTTYTLKIKTGEKKYAGTDANVFAILFGEKDDTGLINLKS
CKNYKNKFEQGMINEFIVEAVDLGDLEKLRIGHDNSGGSSGWFLDWVEVDAPSQGQRLRF
PCGRWLDPAEDDGAIVRDLYPADLQTEVYTPFVPYEIKIFTSDVFAAGTDADVFIVLYGQ
NGMCTLQKHLCVNKRERRLYFERGAEDMFIVELEDIGDVIEKIRIGHDNRGTNPGWHLDR
VEIRRQLRKGKGSETTIFPCERWLAKSEDDGETVRELVASDIITQKLLRDGTLKTTEMEV
EDALETHGYKVSVRTGDMYGAGTDANVFLTIYGDLGDTGERKLAKSENNKNKFERGEVDR
FTIEAVDLGQVFKIRIRHDNTMVGADWYLDQVEVQDEDTEEVYMFLCERWLSTKKEDKQI
DRIFYIKGYEGERNTDPYFMKMAQSRQGLDKNANKKKKKKKTTVAEEGPIIPYHFTVSTG
VDRDGSTTARVYVIVIGPNDAETDRLWLDLAEGKKCFAAGGMEHFVCYGADVGEIKRVEL
GHNGVTPESCWLVDELSVAVPTKGIKYIFPCKCWLAKDRGDGLTVRLLNVLDSSTINIIR
KVIYSVSVVTGDTQYAGTDTNIFLTVYGANGSTEEMLLPKNGDRFERDQEDTFTLEIDDI
APLKKIRVRIDGTGSRPDWFLDRILMRNLTTEEEYLFTYENWLSKTKGPKRTKVCELPAV
VDDEEMVEKTTYIIQVQTSDIGGGGTDANVFLIVFGEYGDTGMLPLKESTNRNKFERKMK
DVFRFPDMLSLGELSKVRVWHDNKGPAPGWHLEYIEVKDEAMDQTFRFPCDRWLAKNDDD
GQIIRELACANNESIDLSDKTKYEIATITANTGNASTSENAWIVLEGRKARSKEFVLENK
KKKFLSGATDTFEFSSKHLGEIAGICLGHITKDGKKVKKEVFWHVLEVVVTENELGNKYF
FHCDAQIPLAAKKDQFQTFECYKSVESFASKVRKLVPVKYEIIVITGDVKGAGTDSNVFI
TIYGVNGDSGRRHLRQKFRNLFEREQTDRFVVEMLDLGELLRVKVEHDGSSWNCGWFLEC
VEITNTANSVTTVFLCGKWLDANKSDGQIRRVLYPRY
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaaagagcaaaaacaaaaaaggtggagatcaggatgaggacgatgagaaaaag
aaaaagaaagacaagaagaaaaaaggctcagggaaagatgacagcaacgaagacacaaag
aagacaaaagggaagaagaaaaagattgaaaactatgttgaaatctacgagaacgagctg
cgcaactacgagccggagctgcaggaaaactacgaagacgaataccacaaaaaaaaagtg
tatgaggtggtgactattaccggggatgagaatggagcaggtactgatgccaacgtgttc
atcactctttttggagactatggtatcacacccaaaattcacctggccagcaacacagag
aagaagagtcgaaccgcttttgaaagatctaaaactgatgtgttcaggattcgaactcac
aatgttggacacataaaaaaaattaggattgagcatgacaacacaggcatgaacgccggc
tggttcctggaccgtgtggtcatcacggatgtcattcgccctcatctcaggttctacttt
gcttgcaacaactggctcagcaaagaggagggagatggcctttttgccagagacctgctg
ggcagcatggaccaaatggacatgcccaaatataataaatacatcgttagcgtttttact
gcggatatgaaaggaagtggaaccgatgcggacgtcttcatcaatatttttggcgagttt
ggggacacaggggagaggcgtcttgacagtgacaaaaataactttgaaaaggccacagag
gacaagtttaccattgatgcgccaaacttgggtaaaattaggaagatcaccatcggccat
aacaacaaaggttcgtcagcaggatggtttgtagataaggtgattctggatgatatggga
aacaaagtagtgtatgaattccccatcaatcgctggtttgccctggatgaagatgacggg
aagattcagagggacattttggttggagccgaccagccgacaggtatcgtctacaacgtt
cagatcgtgacgggaaacatccgaggcgcagggaccaactctaaaattcacatagtgatg
cacggtacgaaaggcctgaagaacagtggaaaggtatttctggaaggagggaagtttgag
cgtggactgacagacatatttaacgttgagattgctgcgctcctcagtcctctgagcaga
gttacgattggacatgacaatgatggagttagcgccgggtggtactgcgagaaggttgtt
gtctactgtcctttcacggggatagagcagaccttcccgtgtggcaaatggctggatgat
gaggagggggacggcctgattgaaagagagctgtacgagatggtctctctcaggcaaagg
aggcagaaaaagcacccctggtccttgtggatttggactacagacatgcccaatgccggc
accgacgcagacatctcttttcaggtttacggagaaaagaacaagtcggatgagatcaga
ctggacaacaagtctgacaactttgaacagggccaagttgacaagtttatggtcgagctt
ccagatttgggaaaattaaccaaacttcgaatctggcatgagaagagaaatccttttgca
ggatggcatctgagcaaggttaccttgatgaagacattaacaaaggagaagtacacgttc
ccatgcgagcggtggctggacattaacgaagacgacaacgaagttgtgagggagcttcca
gcctgtggagacctgatagctgagcctcttcccgtgattaaataccggctgacagtctgc
acgggtgatgtcagcggcagcggcacagatgcgtctattttcatcaacttgatcggagac
cagggggacacaggggagcggcagctgatcaactgcaagaataatgtcaacaagtttgag
aaaggaaacatggacgagtttatagtcgaggcggtgaccatcggacggatccgcaggttg
aggatcggacatgacgggaaaggcggcggatgcggctggtttcttgacaaagtgaatgtg
agagaagaaggaaaggcagaggctcatgctgtagagttttcctgcagcaggtggctggac
cgcaacgaggacgatggacagatcaccagagaattagtgccgttcgtagatggtcagcgt
ctgtacaatctcggctatcagatcgtggtgaagacgggcgacattcctggaggaagctca
gattccaacgtgtttgtcaagctttatggagataagggcgacaccgacaagatgatgctg
gtggtttctaccaacaacttggggaactactttgagacaggccgtgttgacatcttcaca
gtggaaacttttgatattggacagataaaccgtctgatgattggtcacactaataaaggg
atgcgtgctggttggttcctggacagcgttcagatcgtggttccggtccaaggaaagaat
tacatgtttcccagtcaccgctggctttgcaaagacgaggctgatgggaaaacggaggtg
gagatttaccccagtgagatcctggaggtggaacaattgatgaactatgaggtaaccgta
gtaacaggagatgtgatgtttgccggcaccaacgccagagtgtttatccagatctacggg
gagaaaggcaaaacagaaactatcactcttgaaaacagatccaacaactttgagcgcaac
acgactgaaatatttaagtttgaggccaaagacgtgggaaagatcttcaaaatacgcatt
ggtcatgatggttcagggatcggatctggctggttcctggagtcagtcgacgttaagcac
ctgattttgactctggtgcccaaagaaaagaaaaaggacgacaagaagaagaagaagaaa
aagaagaaagacgaagaggacgaggatgaagatggaggagaggagatgcaggaggtggtg
cttccgtaccgttttccctgctcacgctggctgagcagcggtgaggaggacggagaactg
gtggtggagctgctgccggaggacgcagacgaggatctggaagtcaacacctatgaagtg
tgtgtcttcacgggtgacatgatgggagctgggacagatgccaaagtctatattaatatt
tatggggaaaacggagacactggtgagcgcctcctgagaaactctgacaacctcaacaaa
tttgagagagggcaggaagacgttttcatcgtgacagctattgatttgctcactttgaaa
aagctgcgaatccgacatgacaacactgagcctcactcatcctggtacctggatcgtgtt
gagatagtggacacaaaggaagacataacgtattacttcccttgtaaccgctggctcgca
gtggatgaggatgacgggcagatagcaagagagctagttcctgttgatgaggcctttatg
aggcaggatgaagatgaggaggggactagcgccactttgggactggagcaaaaatccatg
tccactacctatactctcaaaataaaaactggggaaaagaaatatgctggaaccgatgcc
aacgtttttgccatcctgttcggtgaaaaagacgatacagggctcatcaacctaaagtct
tgtaaaaactacaagaacaagtttgaacaggggatgatcaacgagttcatcgtggaggca
gtagacctgggcgacctggagaagcttcggattggacacgacaactcaggaggttcatcc
ggttggttcctagactgggttgaggtggacgccccatctcagggacagagactacgtttc
ccatgtggccgctggttggatccagcagaggatgacggtgccatcgtgagggatctctat
cctgctgacttacagactgaagtttacactccattcgtgccttatgagatcaagatattc
accagtgatgtgtttgctgcggggacagacgctgacgtgttcatcgtcttgtatggacaa
aacgggatgtgcacgctgcagaagcacctgtgtgtaaacaagagagagcgacggctttac
tttgagagaggagcagaggacatgtttattgtggagctggaggacattggtgatgtgata
gagaaaatcaggataggacatgacaacagaggcaccaacccagggtggcatcttgacagg
gtggagatcaggcgacagctccggaaaggaaagggctcagagaccacgatatttccgtgc
gagcgctggctggccaagtctgaagatgatggagagacagtgagggagctggtcgcctct
gacatcatcacccagaagctcctccgggacgggacactaaagacgaccgaaatggaggtg
gaggatgctctggagactcacggatacaaagtgtcggtgcggacaggtgacatgtacgga
gcaggaactgacgccaacgtttttctcaccatctacggagacctgggagacaccggagaa
cgcaaacttgccaaatctgagaacaacaagaacaagtttgagagaggagaggtggacagg
tttacaattgaggctgtggacctggggcaggtgtttaagattcggattcgtcatgacaac
accatggtgggagctgattggtacctggaccaggtggaggtgcaggatgaggacacagag
gaagtttacatgttcctgtgtgagcgctggctgtcgacaaagaaagaggacaaacagata
gacaggatcttctacatcaaggggtatgagggtgaaaggaatactgatccatattttatg
aagatggcccagtctagacaaggactcgataaaaatgccaataagaagaaaaagaagaaa
aagactacagtggccgaagaaggtccaatcattccttatcacttcacggtgtccactggg
gtggaccgggacggcagcaccacagccagggtttatgtcatcgtcatcgggccgaacgac
gccgagacagaccgtctgtggctggacctggcagaaggaaagaaatgcttcgcagctggt
ggcatggagcactttgtgtgctacggagctgacgtaggagagatcaagagggtggaactc
ggccataacggagtcacaccagagagctgctggttggtggatgagctgtcggttgctgtg
ccaaccaaaggtatcaagtacatcttcccatgtaaatgctggctggctaaagacagggga
gatggtttgactgtcagactgttgaacgtgctggactccagcaccatcaacattatccgc
aaagttatttattcagtctcggttgtcacaggagacactcagtatgcagggacggatacg
aacattttcctgactgtgtacggggccaacgggagcacagaggaaatgttgctgccgaag
aacggggataggtttgaacgtgaccaagaagacacgttcaccctggagatagatgacatc
gctcctctgaagaagatcagagttcggattgatggcactgggagccgcccagactggttt
cttgacaggatcctgatgcggaacctgaccactgaggaagagtatctgttcacttacgag
aactggctgtccaagacaaaaggaccgaaaaggacaaaagtgtgtgagctgccagcagtg
gtggacgacgaagagatggtggaaaaaacaacctacatcatccaagttcagaccagcgac
atcggaggtggtggcaccgacgccaacgtgtttttgattgtgtttggggagtacggcgac
accgggatgctgccgctgaaggagagcaccaacaggaacaagtttgagcggaaaatgaag
gacgtgtttcggtttcctgatatgctcagtctgggggagctctccaaagtccgagtgtgg
catgacaacaaaggcccagcgcctgggtggcatttagagtacatcgaagtgaaagacgag
gccatggaccagaccttcaggttcccctgcgaccggtggctggctaaaaatgatgacgat
gggcaaattattagggagctggcttgtgccaacaatgagtcaatagacctcagcgataaa
accaaatatgaaatcgccaccattactgctaacaccggcaacgcctcaacctcagaaaac
gcctggattgtgttggagggaaggaaagctcgctccaaggagtttgttctggagaataag
aaaaagaagtttttaagcggtgccactgacacgtttgagttctcatccaaacacttgggg
gaaatcgctgggatctgcctcggccacataacaaaagatggaaagaaagtgaagaaagaa
gtcttctggcacgttttggaggtggtagtgacagaaaatgagctgggaaacaagtatttc
tttcactgtgacgcacaaatccctctggcagccaaaaaggaccagttccaaacattcgag
tgctataaatccgtcgaaagctttgcaagcaaagttcgcaaactggttcccgtcaagtat
gaaatcatcgtcatcaccggggacgtgaaaggggcgggaacggactcaaatgttttcatc
actatctacggagtcaacggcgactcgggcaggcgtcacctcaggcagaagttccgcaac
ctcttcgagcgagagcaaacggaccggttcgtcgtggagatgctcgaccttggagagctg
ctgagggtcaaggtcgagcacgatgggagcagctggaactgcgggtggtttttagagtgt
gttgagataaccaacacagctaactcagtcacaacagtcttcctgtgtggaaagtggctg
gatgctaacaagtctgatgggcagatacgcagagtgctttatccaagatactag
DBGET
integrated database retrieval system
