Xiphophorus hellerii (green swordtail): 116729377
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Entry
116729377 CDS
T07363
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116729377 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116729377 (ppil2)
03110 Chaperones and folding catalysts [BR:
xhe03110
]
116729377 (ppil2)
04121 Ubiquitin system [BR:
xhe04121
]
116729377 (ppil2)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
116729377 (ppil2)
Spliceosome [BR:
xhe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116729377 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
116729377 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
116729377 (ppil2)
Chaperones and folding catalysts [BR:
xhe03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116729377 (ppil2)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
U-box type E3
116729377 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
116729377
NCBI-ProteinID:
XP_032433761
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All DBs
Position
12:3222554..3247627
Genome browser
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTNFYGGKRAEIPRSNFKRLPFDHCSLSLQPFEYPVCTEEGVV
FDLLSIVPWIKKYGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYNVFTNNSHIVAIK
VTGNVFSYEAVEQLNIKTKSYKDLLTDEPFTRKDIIMLQDPTNLDKFNVSSFFHVQNNLK
VLDPDEEKAKQDPAYHLKSTNLETRETLAELYKEYKGDQLLASTMKEPEAKKTDKINAAH
YSTGRVSASFTSTAMTPATTHEADAIADDMVRYQYVKKKGYVRLHTNRGDLNLELHCDKV
PKAGENFIRLCKKNYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDGKHTVFGRVVGGFEALTAMENVESDTKTD
KPKSEIKLINTTVFVDPYEEADAQIAAEREKELQKQEEEKQQANMALKKAKEDQAPKTFK
EGVGKYINPAAAKRPAAEDEGGPSTSGQTAKKSKGKTSFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaggacaaaatgtacatcacatgtacagaatacaccaat
ttttatggagggaaacgagcagaaatcccccgatcaaactttaaacggcttccgtttgac
cactgcagcttgtccctgcagccgtttgaatatcccgtctgcactgaggagggagtcgtg
tttgacctgctgagcatcgttccatggattaagaagtatggaactaatccgatctctgga
gaaaaactggaagcaaagtctcttattaagctcaacttcgccaagaacaatgacggaaag
tatcactgccccgttctgtacaacgtcttcacaaataactcccacattgttgccatcaag
gtcactggaaatgtgttttcctatgaggctgttgagcaactaaacatcaagaccaaaagt
tataaagacctgctgactgatgaacccttcactagaaaggacatcataatgcttcaggac
cccaccaacctggataagttcaatgtgtccagctttttccatgtgcagaacaaccttaag
gtgctcgatccagatgaggaaaaggccaaacaggatccagcgtaccacctgaagagcacc
aacctggaaaccagagagaccttggcggagctctacaaagagtacaaaggggatcagctg
ttggcctccaccatgaaggagcctgaagccaagaagacagacaaaataaacgctgcccat
tactccactggccgagtctccgcctccttcacctccaccgccatgacgccggcaacgacg
cacgaagcagatgcaattgcagacgacatggtgcgttaccagtacgtgaagaaaaaaggc
tacgtccgtctgcacacaaacaggggagacctgaacctggagttgcactgtgataaggtg
cccaaagctggggagaatttcatccgtctgtgtaaaaaaaactactatgatgggacgatc
ttccacaggtccatccgcaatttcatgattcagggaggggatcccaccggtacaggcaca
ggtggcgagtcgttctggggaaaaccgttcaaagacgagtttcggcccaacttgtctcac
acgggacggggagttctgagcatggccaactccggcccaaacaccaacaaatctcagttc
ttcatcacgtttcggtcgtgcgcgtacctcgacgggaagcacacggtgtttggaagggtt
gttggtgggtttgaggcgctcacagccatggagaatgtggagagtgataccaaaacagac
aaaccaaagtcggagatcaagctgatcaacactaccgtgttcgtggatccgtacgaagag
gccgacgctcagattgcggcggagagagaaaaggagctgcagaaacaggaagaggagaag
cagcaggccaacatggcgctgaagaaggccaaggaggatcaggcgccaaaaacctttaag
gaaggcgtggggaaatacatcaacccggccgcggcaaaacgtccggctgctgaagacgag
ggcggcccgtccaccagcggacaaacggccaaaaagtccaaaggaaagacgagttttgga
gatttcagctcctggtag
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