Xiphophorus hellerii (green swordtail): 116729422
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Entry
116729422 CDS
T07363
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116729422
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116729422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
C1_2
SOS1_NGEF_PH
PH_13
DZR_2
Motif
Other DBs
NCBI-GeneID:
116729422
NCBI-ProteinID:
XP_032433827
LinkDB
All DBs
Position
12:5706714..5758322
Genome browser
AA seq
1847 aa
AA seq
DB search
MELSRRKVPLYGEAKVFALLEGLETVPEHAEVYVVLEGSTLVHVTRAQNDVMLYFIVPGH
NLPEEVSVQAYLCSESMQLTWLGGASLEYVHDDAQDLAEHIIIHGHCLNVTDHKELSSLF
SLRQESSWWAMDRKVALAMANLDIPPNWNVLGSHHGDERIPRECPLHLAVRWGFYRLAEL
LLCQPGGLMAVSLPNEEGVTPLQLAQTTGNTELLELLTNPPNPLATPPAGLTQVWADRSR
LLRFCHDSGNLTLSVRQNLRWSSVESRYADILLLRNRLRDENFLREIKALRRERVETITE
KEELVDDPADTAMYADMNEENSADENVLNFFAEDCEELLIFALNEEDEEDDPSHSDSEKS
QSIRESQALSPTRAAAARLSAMIHGKDQVYANAMLVDQVDGADIKYRSPGDEEEVSPSSC
WDSFSPTLVESGNCSQNRSQSSPHRRPRGSQGPGWDNGREAYSCVSPPYPFASSPSFPSS
PLASAIRLFEGGQRRQTLTGPSDSPALKHKECSLTDASRGLSPSLECDSEEEDVLGHSYP
CSSSKQRSVLQSSSGEERDSFDTSPDFNRSHSETAKKSNKNSEDAEVRLRSYSYSSSSPK
VRPPRPLLNRDSAINDLEEDGTFSSGGRSLLQALSLSKSLSRLNQVKQRAFNLTETTREK
RILGFRKRAQSAEEESTTSLQHLTLTEFLKEIEDEEWDKYIIPSKVESEKYKVSRTFSFL
KSRMSSTRSKTKVKGKETKEGKEKLGASNGHQFVPVSPSAPSLCVACDKPVSGKESLQCA
NCSLNVHKTCRESVAACGKKLQERNLVLMKSKTMSLPQSFAKESSPASLFSSSACSSPSS
SVPTMTKEKRETVASFSKSQSISIDIRGWSETAGVDSECNMTACTNSSPPEEGIPVTTTP
HFTDLPISTKDTVDAPLLSDLSADLLGLEAESWSLAVSPVFCSQHDRRTIKRQDVIYELM
QTELHHIQTLTVMSEVFRRGMLEELQLDSDCVARIFPCLDPLLLFHRNLFRALQECRQAA
TQTDNSRNYLIHRIGDILLQQFSDENAETMKQVYGEFCSHHMEAVNVFKELQQQNKKFQN
FVRQQSNNSLVRRREVPEFILLVTQRVTKYPVLLEKILQYTQDGSQEHSNLSDALAQIRD
IITAVDVMVGKYERSQELQEVLARLETKSFAKLKNGKVFRKQDLHTKHRALQHKGLLYWK
TATGRLKDTLALLLTDVLVFLQEKDQRFIFASVDQKPPVIPLQKLIVREVANEERGMFLI
SASSVGPEMYEVHTTTKEERNAWMRHIRQAVESCPEEEEEEERTAETEEAKQAAEVRVQK
ISKFQETLLGQDQQICHNLEEKLQLYADLTELTLRSPESVPHRHLLVGPAQYFDIEAPRQ
ASSLLTAALREAENLINILQTRDGVPVHSQNSPLQAPECCSYNSHGSSIQESPSEPDYLS
TLSISSNSLGSDSELAGMESASWSSAVELRKGDSKGTLLKVAESVQSLTQLLYSLQAAVT
LQDSYYEVQKLLLQEGERPQLRSITSLQTNLEQEKQRSTDKMKEEKKSLERKKEDVDEVQ
KLQVKLKQEQQRWEKECVAREKQQTDQENVLEQREQQCLSESERLRCEREELDAQLQEYQ
QNLDRLREGQRSVEREKERIEAQQRLLQSWRHSRQSSLPVTIPLDGYKVATHSRTGSFDG
NYSLFKNESGLFSSLQQNHLHQPPIYNHQHTLSTQKKNNPDGPPLSSADRSVSASLYNSL
NTLLSQTHGKQPLYGNNHSCSRPSADCLHTFSSRVPSQQQRCSNTDFTQLEETQTSGSWR
SGITGHGPIKEHNSSSPSLTPLLPPQAYLSLEGQNGEEEVEENIVYL
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggaaggtgcctctctatggcgaggctaaggtatttgcattgctg
gaggggttagaaacggtgccagagcatgctgaagtctatgttgttctggagggatccacg
ctggtccatgtaacccgggctcaaaacgatgtcatgctctactttattgtgccaggacac
aatctgccagaggaggtgtctgtgcaagcctatctatgctctgaatccatgcagctcacc
tggttgggcggggcttcattagagtacgtacatgatgatgctcaggacttggcagagcat
atcataattcacggacattgtctgaatgtcacggatcacaaggagctgagcagcctcttc
agcctccgccaggagagctcttggtgggctatggatcgcaaagtggccctcgccatggcc
aacctggacattcctccaaattggaatgtactgggcagccaccatggagatgaacgcatt
cccagagagtgtcccctccacctggctgtgcggtggggtttttatcggcttgcagagctg
ctgctttgccaaccggggggtttgatggctgtcagtctccctaacgaagagggagtcaca
ccgctgcagctggcacagaccacaggcaacactgagctcctggagctgctcacaaaccca
cccaaccccctcgccactcctccagcaggtctgacgcaagtgtgggcagatcggtcccgc
ttgctgcggttttgccatgacagtgggaacctgactctgtccgttcgacaaaacctgaga
tggagttcagtggagagtcggtacgctgatatcctcctgctcagaaacaggctcagagat
gagaacttcctcagggagatcaaagcgctcagaagggagcgggtggaaaccataacagag
aaggaagaacttgtggatgatcctgcagacaccgctatgtatgctgacatgaacgaagaa
aattctgctgatgaaaatgttctcaacttcttcgctgaggactgcgaggagctgttgatt
tttgccctgaatgaggaggacgaagaggacgatccttcacactctgactctgagaaaagc
cagtctataagggagagccaggccttgtccccgactcgggcagcagctgccagactttca
gcaatgatacacggcaaagaccaagtgtacgccaacgccatgctggtggaccaggtagac
ggagctgacattaagtatcggtctccaggggatgaggaggaggtcagcccttcatcctgc
tgggattccttctctcccactctcgttgaatcggggaattgctcccagaatcgttcccaa
tcctcaccccatcgcaggccaaggggaagtcagggcccaggctgggacaatggcagggag
gcatactcttgtgtttctcccccttatccctttgcctcctccccatcttttccttcctct
cccttggcttccgcaattcgtttgttcgagggagggcagaggcgacagacgctgactggt
ccttcagactctccagctttgaagcacaaagagtgcagcttgacagatgcgagccggggc
ctgagccccagtctagagtgtgacagtgaagaagaggatgttttgggccactcctaccct
tgctcatcttcgaaacagaggtccgtcctgcagtccagctctggagaagaaagagactct
tttgacacttcacctgattttaatcgctcacactctgaaactgcaaagaagtccaacaag
aattcagaagatgctgaggttcgtctgcgctcctactcctactcctcctcctcccctaag
gtgaggccaccgaggcctctgctgaaccgggactcagctatcaatgatctggaagaagat
ggcactttcagcagcggcggtcgttcgctacttcaggctttatctctctctaaatcctta
tcacgtctcaaccaagttaaacagagagccttcaacctgactgaaacgacgagagaaaag
aggattctgggtttccgtaagcgggcccagtcagcagaggaggagagcacgacatcactc
caacatctcacgcttacagagttcctcaaagagattgaggatgaagagtgggataaatac
ataatcccatctaaggttgagtcggagaagtacaaagtgagccggaccttcagcttccta
aagagcaggatgtccagtacccgaagtaaaaccaaggtaaaagggaaagagacgaaggag
ggaaaagagaagctgggagcgtctaatgggcaccagttcgttcccgtgtctccgtctgct
ccttctctctgtgtggcctgtgataagcctgtttctgggaaagagtcgttgcagtgcgcc
aactgctctctgaatgtccataaaacctgtcgggaatctgttgcagcctgtggaaagaaa
ctgcaggagaggaatctagtactaatgaaaagcaagactatgtctctcccacagagtttt
gctaaggaaagttctccagcttctcttttctcttcctccgcctgctcttccccatcatct
tcagttccaacaatgaccaaagagaaaagggaaacagtcgcttctttctccaaaagccaa
tcaatctctatagacatcagaggctggagtgaaacagcaggggtggacagtgaatgcaac
atgacagcttgcactaacagctctcctcctgaagaaggaatacctgtcacaacaactccc
catttcaccgacctacctatcagcacaaaggatactgttgatgctcctctgctgagtgac
ctgtcagctgacttgctggggctcgaggcagagtcgtggagtctcgccgtctctccagtc
ttttgtagccaacacgacagacgcacaatcaaacgacaagatgttatttatgagctgatg
cagacagagctgcaccatattcaaactctgacagtcatgtcggaggtgttcaggagaggt
atgctggaggagctgcagctcgactcggactgcgtggcccggatcttcccctgcttggat
cctctcctgcttttccacagaaacctcttcagagcgctgcaggaatgccgccaggctgca
acacaaacggacaactcccgaaattacctcatccatcgaattggagacatactgcttcag
cagttctctgatgaaaatgctgagacgatgaagcaggtgtacggagagttttgcagtcac
cacatggaggctgtcaatgtcttcaaagagctccagcagcagaacaaaaagtttcaaaat
tttgtcagacaacagagtaataactctctggtcagacggagagaagtgccagaattcatc
ctgttggtcacgcagcgcgtcacaaagtatccagttctgctagagaagatactgcagtac
actcaggatggaagccaggaacactccaacttgtcagatgccctggctcagatccgtgac
atcatcacagccgtggatgtgatggtcggtaagtatgagcgatctcaggagctgcaggaa
gtactcgccaggctggaaaccaagagcttcgccaagctcaagaacggcaaggtgtttcgc
aagcaggacctgcacaccaagcacagagctctgcagcacaaagggctgctctactggaag
actgccacggggcgtctaaaagacactttagctcttttgctcacggatgtcctggttttt
ctgcaagagaaagaccagcgcttcatatttgcatctgtggaccagaagcctccagttatt
cctctgcagaagctcattgttagagaggtagccaatgaggagcgaggaatgttccttatc
tctgcatcctccgtggggccagagatgtatgaagttcacaccaccacaaaagaagagagg
aatgcctggatgagacacattagacaagctgtggagagttgtccagaggaagaagaggag
gaggagcgaactgcagagacagaggaagccaaacaagctgcagaagtcagagttcaaaag
attagcaagttccaggaaacgttgcttggtcaggaccagcaaatctgccacaacttggag
gaaaagttgcagctgtacgctgatcttacagaattaactctccggtcaccagagtctgtc
ccacatcgccatctgctggtgggacctgcacagtacttcgacattgaggcgccgcgtcaa
gcatcatcgctgctcacagctgcactgagagaagctgaaaacctgatcaacattctccag
acccgtgatggcgtcccggtccacagccagaactctcctctccaagccccagagtgctgc
agctacaacagccacggcagcagcattcaggagtctccctctgaaccggattatctgagc
acgctcagtatcagctccaactctctggggtctgacagcgagttagcgggcatggagagc
gcgtcgtggagctcagcagtcgagctaaggaaaggagactcaaaaggaacacttttaaag
gtggcagagagcgtccagagcctgactcagcttctctacagtctgcaggcagctgtgacc
ctccaggacagctactatgaagtccagaaacttcttcttcaagagggagaaagacctcag
cttcgcagcatcacctccctccaaaccaacttggaacaggagaagcagaggagcactgac
aagatgaaagaggaaaagaagagtttggagaggaagaaagaagatgtggacgaggtgcag
aagctccaagttaaactgaaacaagagcagcagcgctgggaaaaagaatgtgtggccaga
gagaaacagcagactgaccaggagaacgtgttggagcagcgagagcagcagtgtctgtct
gagtccgagcggctccgctgcgagcgagaggagctcgacgcccagctgcaggagtatcag
caaaacctggacaggctgagggagggccagaggagtgtagagagggagaaggagaggatt
gaagcccagcagaggctgctgcagagctggagacacagccgccagagcagcctgcccgtc
acaataccactagatggatacaaggttgccacacacagccgcacaggcagctttgatggg
aactactcactgttcaaaaacgagtcgggtttgttcagctccctgcaacagaaccacctc
caccagccacccatctacaaccaccagcacaccctctccacgcagaagaagaataatccg
gacgggccgccgctcagctcagccgaccgcagcgttagcgccagcctctacaacagcctc
aacacgctgctgagccaaacgcacggcaagcagcctctgtacggcaacaaccacagctgc
tcccgaccatccgctgattgcctccataccttcagcagcagagtgccttcacagcagcag
agatgcagcaacacagatttcacccagctggaggaaacacaaacttcaggttcctggagg
tcagggatcacaggtcacggacccattaaggagcacaactcctcctctccctctcttacc
ccgctgctcccaccccaggcttatctctccctcgaaggacagaacggagaggaggaagtt
gaggaaaatattgtttacctctga
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