KEGG   Xiphophorus hellerii (green swordtail): 116729466
Entry
116729466         CDS       T07363                                 
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
  KO
K13203  zinc finger RNA-binding protein
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xhe03041]
    116729466 (zfr)
Spliceosome [BR:xhe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    116729466 (zfr)
SSDB
Motif
Pfam: DZF_N DZF_C zf-met zf-C2H2_jaz zf-U1
Other DBs
NCBI-GeneID: 116729466
NCBI-ProteinID: XP_032433936
LinkDB
Position
12:33516451..33560940
AA seq 1069 aa
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAAAVAVARPAPVAVAAATAAAYGGYQPTHTTNDYGYPQRQAEV
PPPPPPVTSQNYQDSYSYVRSTASAVAYDSKQYYQQPSVTAAVAAAQPQPSVADSYYQTA
PKAVYSQGVTSYTQSQQNRQVTVIKPAAASPASSTFSIFPVTSTVQPVAAAAAAASVVPS
YSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWSGNTFPK
KPTFQSKQLRPKQPPKPTQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQGSSS
TASGGALARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSM
IPQTSASGASATGKTSLSSSSTSSSLCLSSNSSSSSSAPYLKGVNITSSSVVTKNPLASN
LSVASSAAPGKKVNTPKINFVAGSKLQTTGKMEEMREEIKGDTCKPAAPSSASPDAKADL
CDSLSTSALIALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRR
HRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEED
MYWRRMEEEQHHWDDRRRMPDGGYIQGPLGPPGLLGVRPGLPGLQPQGPMPPRRPDSSDD
RYIMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQEHDKEDDKEKKELAKDRVL
KGVMRVGVLAKGLLLRGDKNVNLVLLCSDKPTESLLACIVEHLPKQLTLVTPDKYEVKGS
MEEAAIILTSCIEPKMQVTITLTSPVIREEPGREGDVTSGMVKDPADVLDRQKCLDALAA
LRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAINSASAPLSPG
DALRRVFECISSGILLPGGPGLLDPCEKKPVDTLTAMGEQQREDITSSAQFALRLLAFRQ
IHKVLGMDPLPQMNPRFNVRNSRKRRHDNSDGTDSFEGEGKKDKKDFDN
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattatttcggatttacgcatggcgccgcagctcagtacagc
cagcagccagctgcaggggtagcatacactcatcccaccactgtggccagttacacagtt
catcaggcaccggtggcagcacacactgttgcagcagcctatgcacccactgcagctgcc
gttgctgtggcaagacctgcgcctgttgccgtggcagctgcaactgctgccgcttatgga
ggataccagccaacccatactaccaatgattatggctacccacaacgccaagcggaggtc
ccgccaccccctccaccagtcacctcacagaattaccaggactcttactcatatgttcgc
tccacggcttcagctgtagcttatgacagtaagcagtactaccagcagccttctgtcaca
gcagctgttgctgctgcacagccgcagcccagtgttgcagactcttactaccagacagct
cccaaagctgtatatagtcaaggtgtaacatcctatacccagagccaacagaatcgccag
gttactgtcatcaagccagctgctgccagtccagcttcatccaccttctccatcttcccg
gtgacctccactgttcagccagtggcagctgcagcggctgcagcctcagttgttccctct
tactcccaaagcccaacatacagcaccaatgctgtcacctactctggaacatcatactcg
ggctatgaagcagctgtgtactcagcagcctccagctactaccagcagcagcagcagcag
aagcaggcagttgcagcagtggcagcaacagctgcctggtcaggaaacactttccctaag
aaacccacattccagagtaagcagcttcgacccaagcagccacccaagcccactcagata
cactactgtgatgtctgcaagatcagctgtgctggcccacagacttataaagagcatttg
gaaggccagaagcataagaagaaggaagcagcactgaaagtgtcgcagggcagcagcagc
accgcttcaggaggggcgctggcccggaacgctcagaaccagcttcgctgtgaactttgt
gatgtttcgtgcactggagctgacgcttatgccgcccatattcgaggagccaagcaccag
aaggttgtgaaacttcataccaaacttggaaagccgattccttccacagagcccagtatg
atccctcagacatcagcctcaggtgcttctgctactggcaagacctcccttagcagttcc
agcacttccagctctttgtgtctgtcttccaactcttcctccagctctagcgccccctat
ctgaaaggtgtcaacataaccagcagcagtgtggttaccaagaatccactggccagcaat
ctctctgttgccagttctgcagcacctggcaagaaagtcaacactccgaagattaatttt
gttgctggaagtaaattacagacgacaggaaagatggaggagatgagagaagaaatcaaa
ggcgatacttgtaagccggccgcaccctcttctgcttccccagatgctaaggctgatctc
tgtgattctctgtccacatcggcacttattgctttgcagagtgacgtccagcctgttggt
catgactatgtggaagaagtcagaaatgatgaaggcaaagtcattcgttttcactgcaag
ctgtgtgaatgtagcttcaacgatcccaacgcaaaggaaatgcacctgaagggacggagg
catcgcctccagtataagaagaaggtaaatcctgatctgcaggtagaggtcaagcccagc
atccgagcccgaaagattcaggaagaaaagatgagaaaacagatgcagaaagaagagtac
tggagaagaagagaagaggaggagcgctggaggatggaaatgaggcgatatgaagaggac
atgtactggagacgtatggaggaggagcagcatcactgggatgatcggcgtcgaatgcct
gatggggggtacatacaggggcccctgggccctcctggccttctaggagtccgaccaggt
ctgccaggtctgcagccacagggtcccatgccgccccgtcgtccagattcttctgatgac
cgctacatcatgaccaagcatgcagccatttacccatctgaagatgagctccagtccatt
cagaaaattgtgtcaattacagagcgagccctcaaacttgtctctgacataatcacagat
caggaacacgacaaagaggacgataaagagaagaaggaactggccaaagacagagtgcta
aagggtgtgatgagggtcggtgtcctagctaaaggcctgctgctccgtggagacaagaac
gtcaacctagtgctgctctgctctgacaagcccacagaaagcctgctggcctgcattgtg
gagcacctccccaaacagctaacgctagtaacaccagacaaatatgaggtcaagggatcg
atggaggaagcggctatcatcctaacatcttgcattgagccgaagatgcaagtgacaatc
actttaacttcaccggtcatcagagaggagccgggccgggaaggagatgtaacctcgggt
atggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgct
ctgcgccacgctaagtggttccaggctagagccaatggtcttcagtcctgcgtgatcatc
atccggatcctgagagacctctgtcagcgagtccccacatggtcacctttcccaggatgg
gcaatggagctgctggttgagaaggccattaacagcgcctctgcccctctcagccccggt
gatgcactgagacgtgtctttgaatgcatttcttctggaattttacttcctggtggacca
gggttgttggatccgtgtgagaagaagcctgtggataccctcactgccatgggagagcag
cagagagaggacataacctccagcgctcagtttgctctgaggcttctggcgttccgtcaa
attcacaaagttctgggtatggatcccttaccgcagatgaaccctcgcttcaacgttcgc
aacagccggaaacgccgtcatgacaacagtgatggaacagacagctttgaaggggaaggc
aaaaaagacaaaaaagattttgataattaa

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