Xiphophorus hellerii (green swordtail): 116729536
Help
Entry
116729536 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116729536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116729536
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116729536
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116729536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
DUF1272
zf-RING_10
zf-rbx1
zf-RING_4
zf-Tbcl_FmdE
VPS18_RING_C
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116729536
NCBI-ProteinID:
XP_032434052
LinkDB
All DBs
Position
12:33078950..33087032
Genome browser
AA seq
432 aa
AA seq
DB search
MTCDRKKDEIITDITLIIDGKMIGDIDKKWINDNYHPEKTGSCYRVFSRDFNEVQQLVKR
LSGHLSSLGTQGQTAPPTPCDATCSVPVNGVVMEYIKKKYDEKLKRIQGRFVIEFKAANG
DPQSTVQVNFRAPSESACSSDRVHLDFVRQRFITFYQRTASDLQLTSLHVAPHQAEDLQR
KFPLLFFKSGSSKDTTVCGPFAHVQKLKEFLSQNPKSSDNSPVKRDSARSQSYKSSAPSP
KLSKPPGNETCPICMEPIPPEKKKALQCKHSFCKDCLQRAFDYKPICPICGEVYGTLKGT
QPDGGTMNIRTSSASLPGYERHGTLVIHYHVPSGIQKEEHPNPGQPFEGASRTAYLPDSS
EGRKVLELLRKAFNQRLIFTIGRSSTSGRNNMVTWNDIHHKTSTHGGPTSYGYPDPEYLN
RVQEELKAKGIK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgatcgcaaaaaggacgagattatcacagacattactctaatcattgatggg
aagatgattggagacatagataaaaagtggattaatgataactaccatcctgagaaaact
ggttcctgttacagagtgttcagtagagactttaatgaggtgcagcagcttgtaaagcga
ctgtcaggacatctttccagtcttggaacacaaggacagactgctcctccaactccctgt
gatgcaacatgttcagtacctgtgaacggagttgtgatggaatacattaaaaaaaaatat
gacgaaaaactaaagagaattcaaggccgttttgtcattgagttcaaagcagcaaacggt
gacccccagagcacagtacaggttaacttcagagccccaagtgaatcagcttgctcttct
gacagggtgcatctggactttgtgaggcagaggtttatcactttctaccagagaactgcc
tctgacctgcagctaacatctcttcatgtggctccacatcaagctgaggatctgcagaga
aagtttcctctcctgttttttaaatcaggctccagcaaagacacaacagtctgtggacct
tttgcacatgtgcaaaaactgaaagagtttctttcacaaaatccaaagagttcagacaac
agtccagttaaaagggattcagcaagaagtcaaagctataagtcatctgctccttcaccc
aaactaagcaaacctcctggcaacgagacatgtccaatctgtatggagccaatcccacca
gagaagaaaaaggccctgcagtgcaagcattccttctgcaaagactgtctccaaagagcc
tttgactacaaacccatttgtcctatctgcggggaggtgtacgggaccttgaagggaaca
cagcctgatggagggacaatgaacatcaggacatcctctgcctccttacctggatatgag
agacatggaacattagtcatccattatcacgttccaagtggaattcaaaaggaggagcat
ccaaaccctggtcaaccattcgaaggtgcatcccgaaccgcctacctcccagactcctct
gaaggaaggaaggtcctggagctgctcaggaaagcctttaatcagaggctcatcttcact
attggtcgatccagcaccagtggcaggaacaatatggtgacttggaatgatattcaccac
aagacatcaacgcatggaggaccaacttcctatggatacccagatcctgaatacctcaac
cgagtccaagaagagctaaaagccaaaggcatcaaatag
DBGET
integrated database retrieval system
