Xiphophorus hellerii (green swordtail): 116729547
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Entry
116729547 CDS
T07363
Symbol
msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116729547 (msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116729547 (msi1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116729547 (msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116729547
NCBI-ProteinID:
XP_032434067
LinkDB
All DBs
Position
12:complement(26264243..26292666)
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AA seq
348 aa
AA seq
DB search
MDTEGSQSSLSAADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAVVRGSTPSRTAGFLGTSSPG
PMADLYGTAGQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaagggagccagagcagcctgtccgccgcggactcccctcacgacccctgc
aaaatgtttataggtggactcagctggcaaactacacaagagggcctgaaggagtacttc
tgcaagtacggcgaggtgaaagagtgtatggtgatgcgagatccggttactaagcgctcg
aggggtttcggatttgtcaccttcgtcgatcaggccggcgtggacaaagttttggcccaa
agcagacacgagctggactccaaaacaatcgatccaaaggtggcgttccctcggagagct
cagcccaagctggtgactcgaaccaagaagatctttgtgggcggcctgtcagtgaacaca
accatcgaagacgtgaagcaatactttgatcagtttggcaaggtcgacgacgccatgctc
atgttcgacaagaccacaaacaggcacagagggttcggattcgtgacattcgagaacgag
gatgtggtcgagaaggtctgcgagatccacttccacgagatcaacaataaaatggtggag
tgtaagaaagctcagcccaaggaggtgatgtctcccaccggctctgccagggggcgctct
cgggtgatgccctacgggatggacgccttcatgctaggaatcggtatgctgggttatccc
ggcttccagactgccacttacaccagccggagctacgcgggcatcactcctggatacacc
tatcagttccctgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctcacagcgtacggaccaatggcggcggcggcggcagcggca
gtcgttagaggttccaccccttctcgcaccgcaggatttttaggaacgagcagcccgggt
ccgatggccgacctctacgggacggccggccaggagtcggctgtcagcagctacctcagc
gctgcgagccctgccccaagcaccggcttcagccacagtttggggggccctctgattgcc
accgccttcacgaacggctatcactga
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