Xiphophorus hellerii (green swordtail): 116729585
Help
Entry
116729585 CDS
T07363
Symbol
snx18
Name
(RefSeq) sorting nexin-18
KO
K17923
sorting nexin-9/18/33
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116729585 (snx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116729585 (snx18)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116729585 (snx18)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
116729585 (snx18)
Macropinocytosis
Sorting nexins
116729585 (snx18)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116729585 (snx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
116729585
NCBI-ProteinID:
XP_032434121
LinkDB
All DBs
Position
12:6076319..6092437
Genome browser
AA seq
567 aa
AA seq
DB search
MALQARVIYDFNSENPGELSVKESEILTLFSEQDIDGWLESSNSKGDRGLVPASYVEILR
SEAELNSYNINAEPRYSNITAGGFDKLQNFSKPPLVGLTTNTAPIQEHHNNKHHIQGSDD
DWDDDWDDSSTVADEPGSVGGRYQDSEGSTYRVTTHIGPRGNATQAKSSATVGRNLNRFS
TFVKSGGEAFVLGEASGFVKDGDKLCVVMGQYGPEWQENPYPFSCTIDDPTKQTKFKGMK
SYISYKLTPTHTQNPVSRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRR
KGLIWWMNHMTSHPVLSKCDVFQHFLTCTDEKAWKQGKRKAEKDELVGANFFLTISTPPA
PLDFQEVESKIDGFKTFTKRMDDSTMQLNATVNEFARKQMGGFKKEYQKVGMSFKALSQA
FEMDQQTYSSGLNHAISFTGDTYEAIGEYFYEQPSKDLDPIMDLLALYQGHLANFPDVIH
VQKGALTKVKESQKHVEEGKMDRPQADGINDRCNIISCATLAEIQHFHHIRVRDFKAQMQ
HHLLQQIAFFQKITGKLEEALQKYDNA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgctccaagccagagtgatctacgacttcaactctgaaaacccgggggagctgtcg
gtgaaggagagcgaaatcctaactttgttcagcgagcaggacattgatggctggctggag
agctccaacagcaaaggggacagaggactggtccccgcctcgtacgtggagatcctgcgg
agcgaggctgagctgaacagctacaacatcaacgcggagcctcggtactctaatatcaca
gctggaggctttgacaaactccagaacttctctaagcctcctctggtagggttgaccaca
aacacggcgccgatacaagagcatcacaacaacaaacaccacatccaaggcagcgatgat
gactgggatgatgactgggatgacagctccactgtagcagatgagccagggagtgtggga
ggaaggtaccaggactccgagggctccacatacagagtgacaacacacattggtccaaga
gggaatgcaacgcaggcgaagagctcagccacagtgggcagaaacctgaacaggttctct
acctttgtaaagtcaggaggagaggcgtttgtgctcggagaggcgtcaggctttgtgaag
gatggggacaagctgtgtgtggtgatgggtcagtatggtccggagtggcaggagaatcct
taccccttctcctgcactattgacgatcccaccaagcagaccaagttcaaagggatgaag
agctacatctcctacaagctgacccccacgcacacccagaaccctgtgagcaggaggtac
aagcacttcgactggctttacgctcgcctggcggagaagttcccagtcatctctgtgcca
cacctcccagagaagcaggccacaggccgcttcgaggaggacttcatctccaagaggagg
aagggtctcatttggtggatgaaccacatgaccagccaccctgtcctgtccaagtgtgac
gtcttccagcactttctgacctgcacagacgagaaggcctggaagcaggggaagaggaag
gctgagaaggacgagctagtgggagccaacttcttcctcaccatcagcactccaccggct
cccctcgacttccaggaggtggagagcaaaattgacgggttcaagaccttcaccaagagg
atggacgacagcaccatgcagctcaacgccaccgttaatgagtttgctcgcaagcagatg
ggtggatttaagaaggagtaccagaaggtggggatgtcatttaaggctctgagccaggcc
tttgagatggaccagcagacatattcatcgggactcaaccacgccatctccttcactgga
gatacctacgaagcgattggagagtatttttatgaacagcccagcaaagatctggaccca
attatggatttgttagctctttaccaaggtcacctggcaaactttccagacgtcatccat
gtccaaaaaggagccctgacgaaggtgaaggagagccagaagcacgtggaggagggcaag
atggaccggccgcaggcagatggcatcaacgaccgctgcaacatcatctcctgcgccacg
ctggctgagatccagcacttccaccacatccgcgtgagagatttcaaggcccagatgcag
caccatctcctgcagcagatcgctttcttccagaagatcacgggcaaactggaagaggct
ctgcaaaagtacgacaacgcataa
DBGET
integrated database retrieval system
