Xiphophorus hellerii (green swordtail): 116729588
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Entry
116729588 CDS
T07363
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116729588
03041 Spliceosome [BR:
xhe03041
]
116729588
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116729588
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116729588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
116729588
NCBI-ProteinID:
XP_032434125
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All DBs
Position
12:535372..550422
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AA seq
558 aa
AA seq
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MAELVQGQASMNQPGLKSDGLVDVLQRARQIVGKMGGEAMSHLNSSSGSVESTLYYPGQK
RPGEDGVGNQLPAMGHQRVMTEEYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIASDSG
GLMERPCSLTGTPESIEQAKRLLVQIVERCRNGPGFHGDGDGGAAVQEMLIPASKVGLVI
GRGGDTIKQLQERAGVKMMMIQDGPLPTGADKPLRISGDPYKVQAAKELVLEVIREKDGE
FRSGRSDFGGRLGGTNLDVQVPRFAVGIVIGRNGEMIKKIQNDAGVRVQFKADDGISPER
VAMVMGQPERCQHAVHLINELIQTAQERDGFGSALRSSRVRGRSDWTMGSPGPLQEVTYT
IPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFTIRGSAQQMEVARQL
IDDKIGGSGIMSNGGFGFGPFTQGPAAHQNSGQPFVTGVWGNTYQTSWQNPGQQDPGHSL
AQTGQMDYSKAWEQYYKKLGQQNQPQNMMTDYSKAWEDYYKKQSQSSQQSSVPDYTAVLA
EYYRQQPYLWNPAQIQDH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtgcagggacaggcctcgatgaaccagccggggctcaagtcagacggc
ctggtcgatgttttacagagggcccggcagattgtggggaaaatggggggagaagccatg
tcccacctcaacagctcctcaggaagcgtggagtccacgctgtactaccctggacagaag
cgacccggagaggacggagtgggtaaccagctcccagccatgggccatcagagggtgatg
acggaggagtacaaggtcccggaccggatggtgggcttcattatcggcagaggcggcgag
cagatcaccaggatccagctggagtcgggatgcaagatccagatcgcctcagatagcgga
gggctgatggagcggccgtgttcactgacgggaactccagagagcatcgagcaggcgaag
cggctgctggtccagatcgtggagcggtgtcggaacgggccgggtttccatggtgatggc
gacggcggcgccgcggtgcaggagatgctgatcccggccagcaaggtggggctggtgatc
ggccgcggcggcgacaccatcaagcagctgcaggagcgggccggggtcaagatgatgatg
atccaggacgggccgctgccgaccggtgccgacaagccgctccgcatctccggagatccc
tacaaagtccaggcggccaaggagctggttctggaggtgatccgggagaaggatggggag
tttcggtccggacgcagcgacttcggaggccggctgggcggaaccaatctggacgttcag
gttccgaggttcgccgtcggcatcgtgattggcaggaacggagagatgatcaagaagatc
cagaacgacgccggggtcagagttcagttcaaagcagatgatggcatcagtccggagcgc
gtcgccatggtgatgggtcagccggagcgctgccagcacgcggtccacctcatcaacgag
ctcatccagacggcccaggagcgggacggcttcggctcggccctgcggagctccagggtc
agaggtcgcagtgactggaccatgggctctcctggcccgctgcaggaggtcacctacacc
atcccagctgataagtgcggcctggtcattggcaaaggcggtgaaaccatcaagagcatc
aaccagcagtccggggcccatgtggagctgcagaggaacccgccgccctccaccgacccc
aacacccgggtcttcaccatccgcggctccgcccagcagatggaggtcgcccgccagctc
atcgacgacaagatcgggggatcggggatcatgagcaacggaggattcggcttcggcccc
ttcacccagggccctgctgcccaccagaacagcggccagccgtttgtgaccggcgtttgg
gggaacacctaccagaccagctggcagaacccgggacagcaggacccaggtcacagtttg
gctcagacaggacagatggactactccaaagcatgggagcagtactataagaagctaggt
cagcagaaccagcctcagaacatgatgacggactacagcaaggcctgggaggactactac
aagaaacagagtcagtcgtctcagcagagttcggtgccagactacactgcagtgttagca
gaatactacagacagcagccctacctgtggaaccccgcccagatccaggatcactag
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