Xiphophorus hellerii (green swordtail): 116729705
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Entry
116729705 CDS
T07363
Name
(RefSeq) transient receptor potential cation channel subfamily M member 6-like isoform X1
KO
K04981
transient receptor potential cation channel subfamily M member 6 [EC:
2.7.11.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116729705
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116729705
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116729705
Protein kinases [BR:
xhe01001
]
Serine/threonine kinases: Other
Alpha family [OT]
116729705
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116729705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
Alpha_kinase
TRPM_tetra
Ion_trans
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
116729705
NCBI-ProteinID:
XP_032434279
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Position
12:complement(23429198..23456899)
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AA seq
1963 aa
AA seq
DB search
MFYPQSTAMTGKSWIEESFFRRECVKFIPSSWDQHRCIPICQVCQSLIRCCCGRLMGEHS
WQESFPPISLYPSPEQGMEEWSMEAHTKATSTNAYGIIDFQDTATRVCRAKYVRVAVDSK
PEALLQLMLREWQMERPKLLLTVHGGSENFILPPKVKQAFSKGLITAAISTGAWIFTDGI
NTGVSKYVGEAVKLFGGHDLRKRNTIGITPWGMIDNNLDLIGRDVFRPYQPLGNPLSKRT
CLNGFHSHFLLVDDGTLGKPGCQQGLRRKLEKQIQLLKIHPRLNQGVPVLCVVVEGSAAI
VSTVLDYVSNAPPVPVFVFEGSGKAADLFAFLHKQTANDRQLDADIEEDFLGRIGDVFGV
ERTEAAHLYTLLQQCMDHRQSITIFDSEADEQMATDAAILTAVLKGTKASPSEQLSMALA
WDRADIAQKDILVYGQHWQVGSLEQAMLDSLVMDRVSFVKLLIDNGMTMSRFLTVDRLEE
LYNSPQGQTQRFLQHLVEDAKQASLPTGYRLSLIDMGLVIEYLIGGAYRSTYTRKNFRAA
YSRIQCKDSRRYSSDSFINQRRGMSLKKSRSLQDLHFFRTAQPYKSKDQTESTGSSHQVV
LSHGLGRTTLLPCTFNSNDLFVWAVLQQRQQMALFLWQHGEEALARAIVGCKLYRSMAFE
VRQSNMDDNVAERFQSYSLEFGQLAVDVLDCAFQQNEQMAMKLLTSEMEAWSHFTCLQLA
VSSCHRPFVSHSCTQTLLTDLWTGPLNMRKNSFMKIILSLLLPPAVLFLEFKSKAEMCHV
PQSHEAMLFGLESVKSLPVPEGSVQMDRQDVERGLPFHNKSTLSTMFTQFLSWITRLYDF
YTAPVVKFWFHTMSYLGFLMLFSYVILVKMEDQPSVQEWLVILYIVSTAVEKTREVLMSE
PRKLRQKLKVWFSEYWNKSDFVAILLFLVGLSMRCQADPYRTGGHVAYSLDIIFWFIRVL
DLLAVNQHAGPYLTMITKMTSNMFFIVVMMAIVLLSFGVSRQAILSPDHDPSWSLARDIV
FQPYWMIFGEVYAGEHEPCSDESCPPESFLAPLLQAVYMFFQYIIMVNILIAFFNNIYFD
MASISNKLWKYNRYRYIRTYQERPWLPPPLILLSHVALAVRSIYRRFSGDAEQEERRSGL
KLYLGLEDRKRLYEFEEKCVELYLHEKNEDLHSTPINRIRATAERADEMCGMVGEVSEKV
NVIQDSLSELDGQLGQLQDLSVLAVDTLTLLSASDSRQQEEARLAQCRHVLPASRHILPH
SWTLPHRGAEDCDVSNVRRLEIKTCKSTPPSLLKGSAVEGSRRASQERHVGVRETRAGKK
GLPEAGEETAKEDSKSVPVEDPSENWFRGPGRGSHVSSSQFNLSGGRTKTPSETPESSRC
GSPISPKPFGTAHSKAWTYDPHLYPSQEEAAVEEGEEDAEREEKVEEEDVPNLEDESQPS
FPSRYSSHWRKPPLPTRWACVPRERPDGYCRSLSSSMEKIAFSGGPLSPTKGSFPSLEET
TDKECLSDRRGLRNDASLWCSKSQEWGKSSDFSQDLDSRGKIHNRKTVKIKESIPDPETL
ESHLSDALWRKRRRFVGEQTCWSASTSLSQLNFDPTDLVQKQVISHQELWSPTHSARNSL
AKSMSRRSSLQSGFAPEARSSSFQPSDNQYPHFSAMERNNLMRLAHSIPFTPVSILGGEE
VSVYFLEEVCSKAEPESSSVSSWSSRVQSAMLKPLSSEEGSLDGGLRQGSRMLCTWAEQD
VLQPGQIYVVKAFKPEVIRAWQRYFHGSTALQLCLREIQQQRAAQKMMQVFNRIKPKDMH
HSPRFLDVCLVLRHSNGQWLTIERNLIGNFRKYNNNTGEEIAPCCSLEDTLLAFSHWTYE
YSRREMLVLDIQGVGEELTDPTVIMADDQSCSRGEVLFGPDNLGDAAINGFLQKHSCNLC
CHRLGLKGASCLLFLFLCPLQEISQQIKPNYSCWMCGLPPRPI
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgttttacccgcagagcacagccatgacggggaagtcttggattgaggagagcttcttc
agaagggagtgtgtaaagttcatcccttcctcttgggaccaacacagatgcattccaata
tgccaagtgtgccaaagcctgatcagatgttgctgtggccgcttgatgggggagcactct
tggcaggagtcttttcctccgatttccctctatcccagtccagaacagggcatggaggag
tggtccatggaggctcacacaaaggccacttctaccaacgcctatgggatcatagatttt
caagacactgccacgcgggtctgtcgcgccaagtatgttcgtgtggccgtggactcgaag
ccagaggcgctgctccagctgatgctgagggaatggcagatggagagaccgaagctactg
ctgactgtccacggagggtcagaaaattttattttgcccccaaaggtgaagcaggccttc
agtaaggggctcatcacggctgccataagcacaggagcgtggattttcactgatgggatt
aatacaggtgtgtctaaatatgtgggtgaggcagtgaagttatttggaggccacgacttg
aggaagagaaacacgattggcatcacaccgtggggaatgattgacaacaatttggacctc
attggcagagatgtattcagaccctaccagccactgggaaaccctttaagcaagaggacc
tgccttaatggtttccactcccactttctgttggtggatgatgggacgctggggaaacct
ggttgtcagcaaggcctcaggagaaaactggagaaacaaatccagctactgaagattcat
cctcgactgaaccagggagtgcctgtgctgtgtgtggtggtggaagggagcgctgccatt
gtatcaacagttctggattatgttagcaatgcgccccctgtaccggtgtttgtgtttgag
gggtcgggcaaggctgcagacctcttcgccttcttacacaagcagactgctaatgatagg
cagctggatgctgatattgaggaggacttcctgggtaggattggagatgtgttcggagtt
gagaggaccgaagccgcgcacctttacactctactccagcagtgtatggatcacagacaa
tcaatcaccatctttgactctgaggctgacgagcagatggcaaccgatgcagccattttg
actgctgttcttaagggaaccaaagccagtccatcagagcagctgagtatggctctggct
tgggaccgggctgatatcgcacagaaagacatcctggtgtatggtcagcactggcaggtg
ggttccttggaacaagcaatgctggattctctggtgatggaccgtgtgagttttgtgaaa
ctcctgattgacaacggcatgacaatgagccgcttcctcaccgtggatcgcctcgaggag
ctctacaactcaccacagggtcagactcagcgcttcttgcagcacctggttgaagatgca
aaacaagcctctctccctacaggttaccgtctgtctctcattgacatggggctggtgata
gaatacctcattggaggcgcctatcgaagcacctacactcggaaaaacttcagagctgct
tacagccgcattcagtgcaaggacagtagacgttacagctctgattcctttattaaccaa
aggcgaggaatgagcttaaagaaaagcagaagtctccaagatcttcacttcttcagaact
gcccaaccctacaaaagcaaagatcaaactgagtcgacggggagcagccatcaggtggtg
ttgagtcatggccttggtcgcaccaccctactgccatgtactttcaactccaacgacctg
ttcgtgtgggctgttctccagcagcgccagcagatggcgctgttcttgtggcagcacggg
gaagaagcattggcgagagccatcgtgggctgtaagctttatcgctcaatggcctttgag
gtacggcagagcaacatggatgacaacgttgctgagcgattccagtcatattcactcgag
tttgggcagctggctgtggatgtgttagattgtgcatttcagcagaacgagcaaatggcc
atgaaactgttaacctcagagatggaggcatggagtcacttcacatgtctgcagctggct
gtctcctcgtgtcatagaccatttgtgtcacactcctgcacccagactctgctcacagat
ctctggaccggcccactcaacatgagaaaaaactcctttatgaagatcattttgagcctt
ctcctgccgcctgccgtcttgtttctggagtttaaaagcaaggctgaaatgtgccacgta
ccacagagccatgaggcaatgctgtttgggctcgagtctgtgaaatcgctgccagtccct
gagggatccgttcagatggacagacaggatgtagagcgaggcctccccttccacaataaa
tccaccctgtccactatgtttacgcagtttctgtcatggatcacaagactctatgatttt
tacactgctcctgttgttaagttctggtttcacacaatgtcctacttgggttttctgatg
ctcttctcctacgtcatcctggtcaagatggaggaccaaccaagtgtccaggagtggttg
gttattctttacatcgtctccactgctgttgagaaaaccagagaggttttgatgtctgag
cctagaaagctgaggcagaagctgaaggtttggttctcggagtactggaacaaatccgac
tttgttgccatcctcctgttcctggttgggctttcgatgcgttgccaggccgacccctac
cggactggaggacacgttgcttactctctggacatcatcttctggtttatcagagttttg
gatcttctggctgtcaatcagcatgctggtccttacctcaccatgatcactaagatgacc
agtaacatgttcttcattgtggtgatgatggccattgtgctgctgagcttcggcgtatcc
agacaggccattttgtcgccagatcacgatccgtcatggagtctagctcgagatattgtc
ttccagccatactggatgatctttggggaagtgtatgctggagaacatgaaccgtgtagt
gatgaatcctgtcctcctgaatcttttctggcaccgctcctccaggctgtctacatgttc
ttccagtacatcatcatggtcaacatcctcattgcatttttcaacaacatctattttgat
atggcttcaatatccaacaaactgtggaagtacaaccgctatcgctacataaggacctat
caggagaggccgtggctgcccccgccgctcatcctgctcagtcacgtggctcttgctgtc
agaagcatctacaggagatttagtggagatgctgagcaagaagagaggcgctctgggctc
aaactctatctgggccttgaggatagaaagaggctgtatgagtttgaggagaaatgcgtt
gaactctaccttcatgagaagaacgaagatctccacagcactcccataaacagaatcaga
gccacagctgagagagctgatgagatgtgtgggatggtgggggaggtctcagagaaggtc
aacgtcattcaggacagcctgtcggagctggacggtcagctcggtcagcttcaggacctc
tctgtgctggctgtggacaccctcactctgctctctgcctccgacagccgtcaacaggaa
gaggcccgcctggctcagtgtcgccacgttttaccggcaagccgtcacatcctccctcac
agctggaccctccctcacaggggagcagaggattgtgatgtttctaatgtgcgtcgcctg
gagattaaaacctgcaaaagcacgccgccctctttgctaaaaggctctgctgttgaggga
agtcgacgagcgtcgcaggagcgccacgtcggggtgagagaaaccagagcaggaaaaaag
ggactgcctgaggcaggagaggaaacggctaaagaggactccaagtctgtgcctgttgaa
gatcccagtgagaactggttcagaggccctggacgtgggtcacatgtttcctcctctcag
tttaacctcagcggtggaaggactaagacgccctccgaaacccctgagtcgtcccgttgt
gggtctccaatttcacccaaaccgttcgggacggcacatagcaaagcctggacgtatgac
ccacatttgtatcccagtcaggaggaagctgctgttgaagaaggggaagaggatgctgaa
agggaagagaaagtagaagaagaagatgtacccaacctggaggatgaaagtcaaccaagt
tttccgtccaggtattccagccactggagaaaacccccattgcccactaggtgggcatgt
gtgcccagagagcgtccagatgggtactgcaggtctctttcatccagcatggagaagatc
gctttttctggtggacctctcagcccaacgaagggatctttcccatctcttgaagaaacg
acggacaaggagtgcttgtctgacagaagaggtctgaggaatgatgcgtctttatggtgc
agcaagagccaagaatggggaaaatcttcagatttctctcaagacttggacagcagaggg
aaaatccacaacaggaagacagtgaagataaaggagagcattcctgatccagagacgctg
gagtcccacttgtccgatgccttgtggaggaaacggcggaggtttgttggagaacagaca
tgttggtcagcttcaaccagcctcagtcagctcaattttgatcccactgatttggtgcag
aagcaggtgatttcccatcaggaattgtggagtccgactcattcagctcgaaacagcttg
gccaaatcaatgagccgcaggtcttccttgcagagcggatttgctccagaagccaggagt
tcctccttccagcccagtgacaatcagtacccacacttttcagctatggagaggaacaat
ctgatgagactggcccacagcatcccgtttactcctgtttccattttgggaggtgaagaa
gtgagcgtctactttctggaggaagtctgctctaaagctgaacctgagtccagctctgtc
tcttcctggtcgtcgcgggtccagtctgcgatgctcaagccgctctctagcgaggagggt
tccctggacggcggtctccggcagggcagcagaatgctgtgcacctgggcagagcaggat
gtgctccagcctggtcagatatacgtggtcaaagcctttaagccagaggtgatccgtgct
tggcagaggtacttccatgggagcactgcgctgcagctttgtttaagggagatccagcag
cagagagcagcccagaagatgatgcaagtgtttaaccggatcaaacccaaagatatgcat
cactcaccaagatttctagatgtttgcctggtgcttcggcattctaacggccagtggttg
actatcgagagaaacttgatcggtaacttcaggaagtacaataacaacacaggggaagag
attgccccctgctgttcattagaggacacgctactggcattttcccactggacatacgag
tattcacgcagagaaatgctggtgcttgacattcaaggagtgggagaggagctgactgat
ccgacagtcatcatggcagacgaccaaagctgtagcaggggtgaagtgctctttggtccc
gataaccttggagacgctgccatcaatggcttcctgcagaaacactcctgcaacctctgc
tgccacaggctgggactaaaaggtgcgtcgtgtttgctcttccttttcttgtgtcctctc
caagagatctcccaacaaatcaaaccaaattattcatgctggatgtgtggacttcctccc
aggcctatttaa
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