Xiphophorus hellerii (green swordtail): 116729706
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Entry
116729706 CDS
T07363
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116729706 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116729706 (rorb)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116729706 (rorb)
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116729706 (rorb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
116729706
NCBI-ProteinID:
XP_032434285
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Position
12:23404281..23428783
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AA seq
472 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGGHVNGGGVPGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQFGPHNVSMGELDRIAQNIIKSHLETCQYT
TEELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKSLGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMAMPK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccatgcaaaatctgtggagacaaatcgtcgggtatc
cactatggagtcattacgtgtgaaggctgtaagggtttcttcagacggagtcagcagaat
aatgcctcctactcctgcccccgccagagaaactgcctcatcgacagaaccaaccgcaac
cgctgccaacactgccgtctccagaaatgtctcgccctaggaatgtccagagatgcggtg
aagtttggtcgcatgtccaaaaagcaacgagacagcctgtatgcagaagtccagaagcac
caggcccggctgcaggagcagcgacaacagcaaaccggagaagctgaagctctggctcgt
gtttattcctccagcctaaccaatggactgtccaccctcaaccatgaaattgggggcacg
tatgccaacggtcacgtcatagagctacccaaaggtggccacgtcaacggcggaggagtt
cccggcggctactacggcatggattccacccagccgtctccagaccagtcaggtttggac
atgtcaggcatgaagcacattaagcaggagcccgtttacgacctcacgcctgtgccaaac
ctgttcagctacggaggctaccaggacagccagtttggaccacataacgtcagcatggga
gagcttgaccggatcgctcagaatatcatcaagtcgcacctggaaacatgtcagtacaca
acagaggagctacagcagctagcctggcagacgcattcctatgaagaggtcaagatgtac
cagagcaagccacgggacgtgctgtggcagcagtgtgccatccagatcactcatgccatc
cagtacgtggtcgagttcgccaagcgcatctcagggttcatggagctgtgccagaacgac
cagatcctcctcctgaagtcaggttgtttggaggtggtcttagtgcgaatgtgtagagcc
ttcaaccctcttaacaacactgtgctctttgaggggaagtacggaggaatgcagatgttt
aaatctctaggttgtgacgacttagtgagcgcagtgttcgactttgccaagagtttgtgt
tcactgcagctaacagaagaggagattgcgcttttctcagcggctgtactaatttccaca
gatcggccgtggctgatggagcctcgaaaagtccagaagctccaggagaagatctacttt
gctctacagcacattatgcagaagaaccacatggacgaagatgcgctagccaagctgatc
agccggatcccaacactgtccgccctgtgtacgctccacaccgaggagcttcaggcattc
cagcaactccacccagaaacagtgaacgtcctcttccctcctctctacaaggaactgttt
aaccccgacccgaactctgccatggccatgcctaagtga
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