Xiphophorus hellerii (green swordtail): 116729708
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Entry
116729708 CDS
T07363
Name
(RefSeq) thyroid adenoma-associated protein homolog isoform X1
KO
K24169
thyroid adenoma-associated protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116729708
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
116729708
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
HEAT
Motif
Other DBs
NCBI-GeneID:
116729708
NCBI-ProteinID:
XP_032434286
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Position
12:16866752..16881240
Genome browser
AA seq
1867 aa
AA seq
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MSFENLIKSLQDCFITEDSTPGNGCQTLQLFVQKLSESSRSSVKRSKERSLEEAAQLLRQ
IPEVQLRGLEEEHLLLLVRLLLSLQLEMVSISTACRKVDQMLQHLAAKVDHKLVYKETLH
SFNALVHSDQVLSLEDLQRACMYLEDSVVGREVWRESFMPMLQRVSKSLPAVLQEESQRD
GPICYITAKVCLQAFQLLPNEVAPLVWEENHSKEAVQRILQALIDILGQCCNRDTRLLAG
TAVAMLINTASESTAAGAAAWNLLQASHPQPCQLTVGVLQVTCDPVGKDRVDRLAVSRGL
LTCCRPHILLSPSHDTTQACLLLEGLFPLVYALCEEKQDCHYFAFEVLTMWLKRVKECVT
DLWRMTGARLLPDDSKLLQQLTHIIWTNAESPVEGVPEFASSAFTLLLNLYAFDSEQFCD
TSKTFYFTLLERLLKLPWQAKAKYLRLCALLPHVGAELVLDQYTEVSRHLLNCLSTNHLS
PCGSEFYKCLIQQQRRELPVSLTEVDLAGRWANSWQPLLLEALTSEVTLLQNNSSTHLLP
CTLQVFPSAVHHLLASLNPQKPGHLHAWACVLSSYRAISGCSPWALHGSSTFKTLQLALG
SADDKVRLAALNLLCCSPKTRDVPSAEEITILKEFIPQNLNCESSPFRQHLQAAVRRFLV
RIRDGCLAHIRGVKGKKKEDVSHENRKDVLEQGIGFVEWLGELPYSFLSPGHSYQRKKTA
LLLLSAVLETCTDTWSPDKKKGQPPANIGLLIDCARQRGQWDFFCRTKQLLLISCLEDST
NEIRELSAGLLLRFFPPSFPADIAEVLETRSMQLLRSPRVQEAQMGALMMKMLLQKSGHR
CSLSCTANAGRNLCVVRVLLKELEEHHLTAKADMMLSARTKPIHGVLCALQRCLLEAADD
IYTTLDHSLMTKLLDLLENISLLLLAVLHGDCEARVSEKYAPPSFCDMGNAISSLISQQS
GGGQTDEEECVLLSEEHSLVLTCCWVSLKETGILLGSLVEKVLKESKKHSECLLTKRDLM
RASDVFKDILLKCRHWGAVEGCGLGFTKFCTSLLNSSDSDLKDIPAQMLKDGLQVVQCPG
STSVTRRAAGLPMLILCVLSSEEISKARPLLALSMQTLLDTARLPLDENWDQTLDLPQVC
AVHTLQALVRGAGLGAAVLQFAPAVAVLSLTLLRSPCWAMRNAALQLYSSLCSRMLGQRS
SSVEAGPTQHSMSPAAFFFHYPTLQAVLLGELRGAAQHLHRPTAGAKLHLQPSLYPILTL
LAHLQPGVQDSSETLLDFLPPLLQLSASPIYSVRVMASKALVAMTPPSGYFDLLLKLTSQ
LPGPQESCNHNRLHGQLLQMKALLDRALCSDSVCVYSVFSDNLREVVNRIHSSMWLGTTA
QCCPLVRAAYLSVAGSLRRYSCETFLLHLSDRLMHDLHAPQQGLQVGLSSFHQQALHFLC
ADPKWACQTWESFSATSPELRLSLVTWLLDSQDWQQINLKEVIQRVLQSNLKEALLGDSV
DYRTTYLTALVSVMTGGGSALPQPLSDSELCLSECLHLLLQDLEIQKGGPEYLSQALHAA
SLLLSHVSDFSLKTSMLQRWCSILECQRAPEAPEVLRIVCSEALCAAGLPLINNLRDHSS
LPAIMMRLINTGLYLLQDQSQEVRQKAACFASLLHHSRRGNNQKSVCIMQINQALLLLLD
LLLQECWDTPGALEVLLSHLAQTDLRSVLREASPTRGSCSLYEQDEANVFAEPSVMSAHM
LPYLLQMAEKSSQSSALAQTLTAWAEKNTAQVLDNLTDCEQLLPAKTLSPSWLALLVDPR
FHCALGGLFARAVFLLHLLKTSACTQHHCDPLSMQMRLQTVCTLLTQNGVHFTPALTATV
SAEEARL
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgaaaacctgataaaaagtcttcaggactgcttcatcactgaagattcaaca
cctggaaatggctgccagaccctccagctgtttgtccaaaaactgtctgaatcctccagg
agcagcgttaaaaggagcaaggagcgcagtttggaggaggcagcccagctgctgagacag
atcccagaggtacagctccgtggtttggaggaagagcacctcctgcttctggtcagactc
ctcttatccctgcagctggagatggtcagcatctctacagcctgtcgtaaggtggaccag
atgctgcagcatttggcagcaaaggtggaccacaaactggtctataaggagactctccac
agttttaatgccctagtccacagtgatcaggttctctcgttggaggatttgcagagagca
tgcatgtacctggaggacagcgtagttggtcgagaggtttggcgagaatccttcatgcca
atgctgcagagagtatctaaatctcttcctgctgtgctacaggaggaatctcagagagat
gggccgatctgttatattactgccaaggtgtgtcttcaagcgtttcagctgttgcccaac
gaagttgctcctctggtgtgggaggaaaaccacagcaaagaagcagtgcagaggattctg
caggctcttattgacatacttggacagtgctgcaacagggacacgcgtcttttggcgggc
acagcggtggcgatgctgatcaacactgcatccgagagtacagctgctggagctgcagcc
tggaatctgctgcaggcctctcatccacagccctgccagctgactgtgggggtcctgcag
gtgacatgtgaccctgtagggaaggacagagtggaccggctggctgtgagcagaggcctc
ctcacctgctgtcgacctcacatcttactaagtccaagccatgacaccacacaggcttgt
ttgctgctggaaggtttgtttcctcttgtttatgcattgtgtgaggagaagcaggattgt
cactactttgcctttgaggtgttaacaatgtggctgaagagagtgaaggaatgtgtgacg
gatctgtggaggatgaccggcgcccgtctcctgcccgacgacagcaagctcctgcagcag
cttacacacattatctggaccaatgcagaaagcccagtggaaggggtgcctgagtttgcg
agcagtgcctttactctgttgctgaacctttatgccttcgactctgagcagttttgtgac
accagcaagactttttattttaccctgcttgaacgattattgaaactgccctggcaggcc
aaagcaaaataccttcgcctttgtgctctgctgcctcatgtgggagctgagctggtgctg
gatcaatacaccgaagtatctcgccatctcctgaactgcctatcgaccaatcacctgtcc
ccgtgtggctcagagttttataagtgtctgatccagcagcagaggcgagagcttcctgtc
tcactcactgaagtggacctggccgggcgctgggcgaacagctggcagcctctcctcctg
gaggctctgacatctgaagtgactctcctacagaacaacagctcaacacatttactgccc
tgcaccctccaggtttttccctcggccgtgcatcacctgctggcctccctgaaccctcaa
aagccaggccacctgcacgcctgggcgtgcgtcctgagctcctaccgagccatcagcggc
tgttctccctgggctctgcatgggagctccacctttaaaaccctgcagctggctctcggg
tctgcagacgacaaagtgcgtctggctgccctcaacctgctctgctgcagcccaaagacc
agagatgtcccctctgcagaggagatcacaatactgaaggagtttatcccccagaatctg
aattgcgagtcctcaccttttcggcagcaccttcaggctgcggtgagaaggtttctggtt
cgtatcagagacggctgcttggcacacatcagaggagtcaagggcaaaaagaaagaagat
gtcagccatgaaaacagaaaggatgttctggagcaagggattggttttgtggagtggtta
ggcgagcttccatacagctttctgtcacctggacacagctatcagaggaagaagacggcg
ctgttgttgttgtctgcagtcctggagacgtgcacagatacctggagccccgacaaaaag
aagggacagccaccggcaaatataggacttcttattgactgtgccagacagagaggacag
tgggatttcttctgcagaaccaagcagctgcttcttatcagttgtctagaggattctaca
aatgagatccgggagctctcggctggcttgttgttgagatttttccctcccagtttccct
gctgatatcgcggaagtcctggagacgaggagtatgcagcttctgcgcagcccacgggtg
caggaggctcagatgggagcgctcatgatgaagatgctcctccaaaaatcaggacatcgg
tgcagcctgagctgtactgccaacgctggaaggaacctgtgtgtagtcagagtcctgctg
aaagagctggaggagcatcatctgacagccaaagcagacatgatgctctctgccagaacc
aagcctatacacggagtgttgtgcgctcttcagaggtgtttgcttgaagcagctgatgat
atctataccacacttgaccacagtctgatgaccaagttgttggatctgctggagaatatt
tctctgctgctgcttgcagttctgcatggagattgtgaggctcgtgtctctgaaaaatat
gctcccccgtccttttgtgacatgggaaacgccatcagctctctgatatcccaacagtct
ggaggtggccaaacagacgaggaggagtgtgtcctgctctctgaagagcacagccttgtt
ctcacctgctgctgggtctctctaaaggaaacaggaatacttttaggttcgttggtggag
aaagttcttaaagaatccaagaaacattctgagtgtcttctaactaaacgggatttaatg
agggcgtcagacgtattcaaggatattcttctaaaatgccgccactggggggcagtagag
ggctgcggtttaggcttcacaaagttctgtacgtctctgctgaacagcagtgattcagac
ctcaaggatattcctgcccaaatgctgaaagatggactgcaggttgttcagtgccctggc
tctacgtctgtgacccgacgggctgcagggctgcccatgctgatcctgtgcgttctctca
tcagaggagatcagtaaggcgaggccgctgttagctctcagtatgcaaaccctgctggac
accgccagacttcccctcgatgagaactgggaccaaaccctggacctcccacaggtatgt
gcggttcacactctgcaggcgttggtgcgtggcgcaggtttgggggcagctgttcttcag
tttgctcctgctgtagccgtcttgtctctgactctgctccgatctccatgctgggccatg
aggaatgctgcactgcaactttacagctctctttgctctcgaatgcttggccagaggtcc
agcagtgtagaggctggccccacgcaacacagcatgtcccctgctgccttcttctttcac
taccctacgcttcaagctgtcctcctgggcgagctgagaggggcggcgcaacacctccat
aggccaaccgctggggccaagctgcatctgcagccctcactctacccgatcctaactctg
ctggcccacctccagcctggcgttcaagactcatcagaaacgttgttggacttcctgcct
ccgttactccagctatctgccagtcccatttatagtgtcagagtaatggcctccaaagct
ctggttgccatgacacctccttcagggtactttgacctcctcctaaagctgacctctcag
ctccctggtccgcaggagtcctgcaaccacaaccggctccatggccagctgctacagatg
aaggccttactggaccgagctctctgctcagacagtgtttgtgtctatagtgtcttttcc
gacaacctgcgtgaagtggtgaacaggatccattcttcaatgtggctggggaccacggct
cagtgctgccccctggtgagagcagcgtacctcagtgtggctggctccctgagaagatat
tcctgcgagactttcctgttgcacctcagtgacagacttatgcatgatcttcatgcgcct
cagcagggtcttcaggttggcttgtcatcgttccatcagcaagcccttcacttcctctgt
gcagatccaaagtgggcttgtcaaacttgggagagtttttctgcaacctcccctgagctg
aggctctcgctggtcacttggttgctggacagccaggactggcagcaaatcaacttgaaa
gaagtgatccagagggtgttgcagtcaaacttgaaggaggctttgttgggcgacagcgtg
gattaccgcaccacgtacctcacggctctggtttctgtgatgaccggtggtggctctgct
ttgcctcagccgctttccgactcagaactttgtttgtccgagtgtttgcatttattactt
caagacctagaaatccagaaaggtggaccagagtacctctctcaagctctacatgctgct
agcctgctgctttcccatgtgtcagatttcagcctgaagacatctatgcttcagcgttgg
tgcagtatcctggagtgtcagcgggctccagaggccccagaagtcctcaggatagtgtgc
agtgaagctctttgtgcagctggactcccactcatcaacaacctcagagatcacagctct
ctccctgccatcatgatgaggttgatcaacacaggcctgtacctgctacaggaccaaagc
caggaggtgaggcagaaagctgcctgttttgcctctttgctgcatcattcaagacgaggt
aacaaccaaaagagtgtctgcattatgcagatcaaccaagctctgctgctcctcttggac
ctgctgctgcaggaatgctgggatactcctggtgcgctggaggtgctgctgtcccaccta
gctcagactgacctcagatcagtgctgagagaagcctcaccaacaagagggagttgcagt
ctgtatgagcaggatgaggccaatgtgtttgcagaaccctccgtcatgtctgcacacatg
ctgccctacctgctgcagatggctgagaaatcttctcaatcctctgctctggcacagact
ctgactgcatgggcagagaagaatactgcccaggtgctggataacctcacagactgtgaa
cagctcctgccagctaaaacattgtctccctcttggttggctctccttgtggatccccgt
ttccactgcgccctggggggcctcttcgccagagctgtctttcttcttcatctgctgaaa
acctctgcttgcactcagcatcactgtgatcctttaagcatgcagatgcgtttgcagaca
gtttgcactcttctcactcagaatggtgttcattttacacctgccttaacagctactgtg
tctgcggaagaggcacgactgtga
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