Xiphophorus hellerii (green swordtail): 116729711
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Entry
116729711 CDS
T07363
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116729711
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116729711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Mcl1_mid
Beta-prop_RIG_2nd
HIRA_B
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
116729711
NCBI-ProteinID:
XP_032434294
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Position
12:complement(1654592..1669495)
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AA seq
1021 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNENIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAALIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTVDWQMEANITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLSEEEKNTIHQNIYGKSLAITSTEVQLSTTIIENPEMLKYQQERQNSAQNNAGAA
AAAGPEAAAPKVNSVMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPA
LFNSAPILPSGSSLSNQIAPQLSSDSSPGQPSSLGARPNQDGLLISPPAAGVAKVLEDDK
DGLKSGLLLTSASKIEPMKALDSRFTERSKATPGIPSAISSTAGLAPLERPKDGVSALKD
AKAKEETSSDSEDKMAAINKNLTFAKRKPELLLDGGEVVEKRKKGRPRKDKMAASIPQPF
TQITPLPLEREPSRAAAPPAAAAVLRLPTPSPQKAFSLQVSMDPSVFLEVENDVSVVAGS
KLSQLRCSRDGRDWNTLLPSSVLAAAGSSDVLAVACDDRMLSVFSCSGRRLLPAIQLATP
VSALHCSAHFVMVLTAGATLSVWDAQRQTALVKNESLQTIFSGAETTVSLSLLTQQGVPI
IGLSNGKSFCFSVSLETWTLIADKGDSLVQCADFRSCLPSQDAGASSGPLAVVQGRNLNA
GRLASRLSSTPHHLQQSMTLAFLENQLASALTLQSAQEYRYWLLIYARFLVNEGSEYRLR
ELCKELLGPVHKSAASSWQPATLGLHKRELLREVLPVIGENLRFQRLFTEYQDQLELLRP
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctgggtgagccacaacggcaaacccattttttcagtcgat
attcatccagatgggacgaaatttgcaacaggtggacaaggggaggattctgggaaggtg
atgatctggaacatggcgcctgtcctcagggaggaagacgagaagaatgagaacattccc
aaaatgctctgtcagatggacaatcacttagcctgtgtgaactgcgtgcgctggtccaac
aacgggctgtacctggcttcaggaggagacgacaagctggtgatggtgtggaagagagcg
gcgctgatcggcccgagcacggtgttcggctccagcagcaagctggccaacgtggaacag
tggaggtgtgtgaccatcctgaggaaccacaccggagatgtgatggatgtggcgtggtcg
cctcacgacgtgtggctggcgtcctgcagcgtcgacaacaccatcgtcatctggaacgct
cgcaagttcccagagatggtgacctgcctgcgcggccacacaggcctggtgaaaggtttg
acctgggacccggtggggaagtacatcgcctcgcaggccgacgaccacagcctgaaggtg
tggaggacggtggactggcagatggaggcgaacatcaccaaacccttcaacgagtgcggc
gggacgacccacgtcctgcgcctgtcctggtccccggacggccagtacctggtgtcggcc
cacgccatgaacaactcgggccccaccgcccagatcgtggagcgcgacggctggaagacc
aacatggactttgtgggccaccgtaaagccgtcaccgtggtgaaattcaacccaaagatc
ttcaagaagaagcagaagaacggcagctctccgaagcccagctgtccgtactgctgctgc
gccgtggggagcaaagaccgctcgctctccgtctggctcacctcactgaagcgccctctg
gtggtcatccatgacctgtttgataaatcgatcatggatatttcctggaccctgaccggt
ctggggatgctggtgtgctccatggacggcaccgtggcctacctggacttttccctggac
gagctgggagacccgctgagtgaggaggagaagaacaccatccaccagaacatctacggg
aagagcctggccatcaccagcaccgaggtccagctctccaccaccatcatcgagaaccca
gagatgctcaagtaccagcaggagcgccagaactcggcccagaacaacgccggcgccgcc
gctgccgccgggcccgaagccgccgcccccaaggtcaacagcgtgatgaacggcgagtct
ctggaggacatccggaagaacctcctgaagaagcaggtcgagacgaggacggcggacggg
aggagacggatcacgccgctgtgcatcgctcagctggacacgggggatttctccccggct
ctcttcaacagcgcccccatcctgccctccggttcctccttgtccaatcagatcgctccg
cagctcagctctgactccagcccgggtcagccgtcgtctctgggcgcccggcccaaccag
gacgggctgctcatctcgcctcctgccgccggcgtcgcaaaagtcctggaggacgacaaa
gacgggctgaagtccggcctgctgctcacctcggcctccaagatcgagccgatgaaggcc
ctggactcccgcttcacagagaggtcaaaagccacgccggggatcccgtcggccatctcg
tccacggccggactcgcccctctggagaggccgaaggacggcgtctccgccctgaaggac
gccaaagccaaagaggaaaccagcagcgacagcgaagacaagatggccgccatcaataag
aacctgacgttcgccaagaggaaacccgagctgctgctggacggaggagaggtggtggag
aagaggaagaagggacggcccaggaaggacaagatggccgcctccatccctcagcccttc
acccagataactcctcttcctctggagcgggagccaagcagagcggcagctcctccagct
gcggctgccgttctgcggctgccaacgccgagtccgcagaaagccttcagcctgcaggta
agcatggatccgtctgtgttcctggaggtggagaacgacgtctcggtggttgccggttcg
aagctcagccagctgcgttgctccagggacgggcgggactggaacacgctgctgcccagc
tctgtgttggccgccgcggggagcagcgacgtcctcgccgtcgcctgtgacgacaggatg
ctgtcggtgttttcctgctccgggcgacgcctcctccccgccatccagctggccacgccc
gtctccgccctgcattgctccgcccacttcgtcatggtgctgaccgccggagccacgctg
tctgtctgggacgcgcagaggcagacggctctggtgaagaatgaatctctgcagaccatt
ttctctggcgctgagacgacggtgtccctgtccctgctgacccagcagggcgtcccgatc
atcggactgtccaacgggaagtccttctgcttcagcgtgtctctggagacatggacgctg
atcgcggacaaaggagactctctggtccagtgcgccgactttaggagctgcctcccgtcg
caggacgccggcgcgtcgtcggggccgctggccgtcgttcagggacgcaacctgaacgcc
gggcggctggcgtcccgcctgtcctccacgccgcatcacctgcagcagagcatgacgctg
gccttcctggagaaccagctggcgtcggcgctgacgctgcagtcggcgcaggagtaccgc
tactggctgctcatctacgcccgcttcctggtcaacgaaggttctgagtaccggctccgg
gaactctgtaaagaacttctgggtccggtccacaaatctgctgcttcatcctggcaacca
gcaactttgggtctgcacaaacgcgagctgctgcgggaggttctgcccgtcatcggagag
aatctgcgctttcagagacttttcacagagtaccaggaccagctggagctgctccgcccc
aaataa
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