Xiphophorus hellerii (green swordtail): 116729725
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Entry
116729725 CDS
T07363
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12-like
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116729725
Peptidases and inhibitors [BR:
xhe01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
116729725
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
Reprolysin
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
TSP1_CCN
Reprolysin_3
ADAMTS_CR_3
TSP1_spondin
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
116729725
NCBI-ProteinID:
XP_032434320
LinkDB
All DBs
Position
12:5807332..5831485
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AA seq
1592 aa
AA seq
DB search
MLCSLECSLLFRLHFVFMLAAGHDELSARLLSLSNEQGHLSQSGSDPSIVHPVRISADGE
FVSHSVSHHFKTGRSRRALRSLFPEGQVYYKLNYNGRALMFNLTKNHHLLSTEYVLERKN
GSASRAEPVLSEGNSCHLLGTVEAPDVKGTAAISTCKGLRGFFSLPEGHFFIEPAQKLPS
DPAGTPEPHVVYSRSTEEKHRRKRSLESKHTPSPCGVQDAPSDSHQVEKEREEWEREQQR
GEAQSQSRSQRSVSRERWVETMVVADSKLIEYHGSDNVESYIFTIMNMVAGIFHDASIGN
AIHVILVRLILLQGEEKGLKIAHHADTTLSSFCAWQKNLNPQSDTHPAHHDLAVLITRKD
ICAGMNQPCETLGLSHLSGMCQPHRSCNINEDSGLPVAFTVAHEMGHSFGIHHDGQGNDC
EVGTKHPFIMSRQLMYDSSPLTWSSCSKEYITRFLDRGWGFCLDDRPSKRDLTTPLARLG
VRYTTHHQCQLQYGPNATFCPEVDNVCQILWCSVNGSCRSKLDSPIDGTRCGPDKWCISG
ECVIVGKLPETVNGGWGPWGKWSYCSRTCGTGVQSAERECNNPKPEFGGKYCTGERKRYR
TCNTKPCQNEKPSFREMLCSEFDTVPYHNQLYQWIPVVNPLNPCELHCRPVSDYFSEKML
DAVTDGTPCFMNNKSRNICVNGVCKEVGCDFGIDSNAVEDRCGVCLGDGTSCETVYKTYD
EQEGFGYVDMGVIPEGARDILVREAEEAGNFLALRSVGSGEYFLNGNFIIQWNGEYEAGG
TTFYYERSGDMENLTAPGPTKQPVLLQLLFQEKNPGIKIEYTVKKTKFIENEVPEPTYSW
RHGAWTYCSTTCGLGEQHQPVLCFETDVGVVDESLCDPDSRPEDRHRKCKNMECPARWWV
GGWQHCTETCGSTGLRKRTVLCVRTVSGEERVLHPVECRHLLKPKPVVPCNRDVPCGQEW
AVGNWEECPVTCGGGVRSRTVSCTLVPKKSCDLSTKPRSKSLCALQSCPNSNLHRRPGLP
PVYRRIYPNKTPSTKHPGSTSLSPISSTAVPTTITKETTTATTKSTLSPQVAFTEIIVSE
DHDFSVLMRKMKNAKRKVYPNKSSSANKEKKTSVGEEENVDTEEGSTEDGVLYSPGYDYI
VEDKTKQEEKIIDLDFFTTVTSLTTRLQTTTPKPQARPLTKHITRMPPTTALPFSLTSTN
TCSRTTHHLPNINTTSNVKSYRPWTQRAPLTTPMYKFGPGLSKTIFKTMQVPVTTVRKPS
STAAPPHVTLMNLKSFPATTKKTTQTVHAKNPPRSKGSHFKSQNQQPRSQQSSSTSDQRN
LMAREPLSMDVFWVVGNWSECSTTCGIGALWRTVVCSSENDEDCANMKRPEPARTCHLQP
CATWQTGSWSKCPESCGSVRRRHRDVQCVDSQSKRPLRPFHCQIVSSRPLSALGCPQKPC
MNWTVSPWGLCSGSCGEGIRERLVYCPEPHRCSPTSRPNDTELCSLKPCMHWKTEGWGEC
SVSCGEGQQQRAVNCLSDQDSAVLPNRFCEKISKPETLRKCNMQECKKNSVCRKNTMSPR
FCDKLKLLGRCMLRSVQRQCCFTCRALPRLDS
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttcgctggagtgctcgcttctctttcggctgcactttgttttcatgttggca
gcgggccacgatgagctatctgccagactcctctccctctccaacgagcaaggtcatttg
tcccagtctggctcagatccatccatcgtccatcccgtgagaatcagcgctgacggtgag
tttgtctcccactccgtgtctcaccatttcaagaccgggagatccaggcgtgcactgcgg
tccctttttccagagggacaggtctactacaagctcaactacaatggtcgagccttaatg
ttcaatttgaccaaaaaccaccacctgctgtcaaccgaatacgtcctggagaggaagaat
ggcagtgccagcagggctgagcctgtcctgtctgaggggaactcctgccaccttcttggc
acggtggaagcccctgatgttaaaggaacggctgccatcagcacctgcaaaggactgaga
ggattcttttccctgccggaggggcatttcttcatcgaacctgcccagaaattgcccagt
gatcctgcagggactccagaaccacacgttgtctattcaagatctactgaggaaaagcac
agacgaaaacgcagcctggagtccaaacacactcccagtccctgtggagttcaagatgct
ccaagtgactctcaccaggtggaaaaagagagggaggaatgggagagggagcagcagagg
ggggaggctcagtctcagtcccgctcgcagcgctcagtcagccgagaacgatgggtggag
accatggtggtggctgactccaaactcatcgaataccatggcagcgacaatgttgagtcc
tatattttcaccatcatgaacatggttgctggaatatttcatgatgccagtattggaaat
gccatccatgtcatcttggtgcgcctcattctgcttcaaggagaagagaaaggattgaag
attgctcaccatgcagacactacgctgtccagtttctgtgcgtggcagaaaaacctgaat
ccacagagtgacactcacccagctcaccacgatctggctgttctgatcacaaggaaagat
atttgtgcaggaatgaaccagccatgtgagactctgggtctctctcatctatctgggatg
tgtcaaccccaccgcagctgcaacatcaacgaggattcaggactgcctgtcgccttcact
gttgctcatgaaatgggccacagttttgggattcatcatgacggccaagggaatgactgt
gaggtgggaacaaaacacccgttcataatgtcaagacaactgatgtatgacagttcgcct
cttacttggtcgtcctgctccaaagagtacatcacacgtttcctcgatcgtggctggggt
ttctgtttggatgaccgtccttccaagagagacctgactacacctctggcccgtcttggc
gtccgctacaccacccatcatcagtgccagctccagtacggtccaaatgctactttctgt
ccagaggtggataatgtttgccagattctttggtgttcagtgaatggtagctgtagatcc
aaattggattcgcctatagatggtactcgctgtggaccagacaagtggtgtatttctgga
gagtgtgtaattgtgggtaaactgccagagactgtgaatggaggctgggggccttggggt
aaatggtcctactgctccaggacttgtggaactggagttcagtctgcagagagggaatgt
aacaatcccaaacctgaatttggaggaaagtattgcactggagaaaggaagcgttaccgg
acctgcaacaccaaaccttgtcagaatgagaagccgtccttcagagagatgctgtgcagt
gagtttgacacagtgccgtatcacaaccagctctaccagtggatcccagttgttaaccca
ttaaatccctgcgaacttcactgccgaccagttagtgactatttttcggagaagatgctt
gacgcggtgaccgacgggaccccgtgcttcatgaacaacaagtccagaaacatctgtgtt
aacggagtgtgcaaggaggttggctgtgactttggtattgactcaaacgcagtggaggat
cgctgtggggtctgtctgggcgacggcacaagctgtgagacggtttataagacatatgat
gaacaagaaggttttgggtacgtggacatgggggtgataccagagggcgcccgggacatt
ctggtgagggaagccgaggaggcaggaaacttcctggccctcagaagtgtggggtcaggc
gagtacttcctcaacgggaacttcatcatccagtggaacggcgagtacgaggcaggtggg
acgacgttctactatgagcgcagtggagacatggagaacctcactgcacctggacctacc
aagcagccagtcttgctccagttgttgtttcaggagaagaatccaggtataaagatagaa
tacaccgtcaagaagacaaaatttatagaaaatgaggtccctgaacccacttacagctgg
agacacggagcctggacctactgcagcaccacctgtggcctaggagagcagcaccagcca
gtgctgtgctttgaaacagatgtgggagtcgtggacgagtctctgtgtgacccagatagc
cgtccagaggaccgacaccgtaaatgtaaaaatatggaatgtcctgcaagatggtgggtt
ggtggttggcagcattgtacagaaacctgtggatcaacaggattgaggaagagaaccgtt
ctttgtgtccgcactgtttcaggggaggagagagtactccaccctgtggaatgcaggcat
ctgcttaaaccaaaacctgtggtgccgtgcaacagagatgtgccatgtgggcaggaatgg
gctgttggcaactgggaggaatgccccgtcacatgtggaggaggagttcgctcacgcacc
gtgtcttgcacattggtgccaaagaagagctgtgacctctcgaccaaacccaggtccaaa
tcactgtgtgctttgcagagctgcccaaactcaaaccttcacagacgacctgggcttccc
cctgtgtatcgccgcatttacccaaataaaactccctctactaaacatcctggctcaaca
tcattatcacctataagctccacagctgtgcctacaacaatcaccaaagaaactacaact
gccaccacaaaatccactttaagccctcaagttgcatttactgaaattatagtctcagag
gatcatgactttagtgttctgatgaggaaaatgaaaaatgcaaagaggaaagtttatcct
aataaatcaagttccgctaataaagaaaagaaaacaagtgttggagaggaggaaaatgta
gacacagaggagggaagtacggaggatggggtcctgtactccccaggatatgattacatc
gttgaggacaagacgaaacaagaagagaaaattattgacctggactttttcaccactgta
acgtctctaacgactcgtcttcagacaaccacaccaaaaccacaagcacgtcctcttacc
aagcatataactagaatgccacccacaactgctttgccattctctcttaccagtactaac
acatgttcaaggacaacccaccacttacccaacatcaacaccacctcaaatgttaaatca
taccgcccatggacacaacgtgctcctctaaccactcccatgtataagtttggcccgggt
ctttcaaaaactatcttcaaaacaatgcaagttcctgtaacaactgtaagaaaaccatcc
agcactgcagctccacctcatgtgacattaatgaacctgaagagcttccctgcaacaacc
aagaaaaccactcaaactgttcatgctaaaaacccacccaggtccaaaggaagccacttc
aagagccaaaaccagcaaccaaggagtcagcagagcagttccacgagtgaccaaagaaac
ctgatggccagagaaccacttagcatggatgtattttgggttgttggaaactggagtgag
tgctcaacaacatgtgggattggagctctatggagaaccgtggtgtgcagttcagagaat
gatgaggactgtgccaacatgaagagacctgagcctgcacgaacatgtcatctgcaacca
tgcgctacctggcaaactggcagctggagcaagtgtccggaaagctgtgggtctgtgaga
aggaggcaccgtgacgttcagtgtgttgattctcagagtaaacgtccactcagacctttc
cactgtcagattgtgtccagcagacccctaagcgccctgggttgcccccaaaagccctgt
atgaactggactgtgtcaccctggggactgtgctctggcagctgtggtgaaggcattagg
gagcgactggtatactgccccgaacctcatcgctgcagccccacgtccaggccaaacgac
actgaactgtgcagtctaaagccttgcatgcactggaaaaccgaaggctggggggagtgc
tctgtgagctgtggagagggtcaacagcagcgcgcagtcaactgcttgagcgatcaggat
tcggccgttttgccaaaccgcttttgtgagaagatttctaaaccagaaacactcagaaaa
tgcaacatgcaggaatgcaagaaaaactcagtttgcagaaaaaacaccatgtccccccgc
ttctgtgacaagctgaagctgttgggtcgctgtatgcttcggtcggttcaaagacagtgt
tgcttcacctgcagggcgctaccaagactggactcataa
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