Xiphophorus hellerii (green swordtail): 116729741
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Entry
116729741 CDS
T07363
Symbol
ccdc117
Name
(RefSeq) coiled-coil domain-containing protein 117 isoform X1
KO
K27967
coiled-coil domain-containing protein 117
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116729741 (ccdc117)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116729741 (ccdc117)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116729741 (ccdc117)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116729741 (ccdc117)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC117
Motif
Other DBs
NCBI-GeneID:
116729741
NCBI-ProteinID:
XP_032434347
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All DBs
Position
12:16574838..16578663
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AA seq
252 aa
AA seq
DB search
MYSFSGPTTLPEFELGPPSTSDSLQRELNSDSSWETRRFRKHRRLDDEGCSAKKRRLMPE
TEVDILVNTCPTLSAQQVPLPPPPQPCSAHQSLTLPQPSSVQPRAEMESPCMEIEAAHRK
LQEIEDRIILEDDDEDLDVEPVPRRPVLVISDSLKEGLQRGISDILPQTVAQSVSPSGME
LVLWRPPEDPFCQRLKDSLQKQRKQQTVGRQHPTPCSSPSPPLSPSCPPAETCAPMYSFP
VLHHSGEEDMEI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtattcattttcaggccccactactctgcctgaatttgagttgggacctccgagtacc
tctgacagccttcagagagaactaaactcagacagcagctgggaaacaagacgctttcgt
aagcacaggagactagatgatgagggttgcagtgccaaaaagcgaaggttaatgcctgaa
acagaagtggatattttggtgaacacttgtcctactctgtcagcacagcaagtccccctt
cctcctcctccacagccatgttcagcacatcagagcctcactttgccgcagccctcttct
gtccagccccgagctgagatggagagcccctgcatggagatagaagcggctcacaggaaa
ctgcaggagattgaagacagaataatccttgaagatgatgatgaggatcttgatgtagag
ccggtcccgaggcggccggttctggtcatctcagacagtttgaaggagggtctgcagcgc
ggcatcagtgacattctcccccaaactgtggcccagtctgtgagtccttcaggcatggag
ctggtcctgtggcgtcctccagaagatcccttctgccagaggctgaaggactcgctgcag
aagcagcggaaacagcagacggtcggccggcagcacccaactccatgttcgtctcccagc
ccgcccctcagcccctcctgtccacctgcagagacatgcgcacccatgtacagcttccct
gtgctccaccactcgggggaggaggacatggaaatttaa
DBGET
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