Xiphophorus hellerii (green swordtail): 116729751
Help
Entry
116729751 CDS
T07363
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116729751
03041 Spliceosome [BR:
xhe03041
]
116729751
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116729751
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116729751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
116729751
NCBI-ProteinID:
XP_032434373
LinkDB
All DBs
Position
12:30392405..30405661
Genome browser
AA seq
386 aa
AA seq
DB search
MDDEQPRTLYVGNLSRDVTEPLILQVFQQIGPCKSCKMINDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKA
TYENNSKHLSFDDVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGSSIEGHMVKCYWGKETPDMMNSMQQVSMPQQNKIGFAAAQ
PYNQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacaacctagaaccctgtatgtaggaaatctgtccagggatgtcaccgag
cccctcattctacaagtcttccaacagataggaccttgtaagagctgtaaaatgatcaat
gatacggctggaaatgatccatactgctttgtggagttctatgatcacaggcatgctgct
gcctcattggcggccatgaatggaaggaaaatattgggtaaggaggtcaaagtcaactgg
gccacaacaccatccagccagaaaaaagacacaagtaatcactttcatgtctttgtcgga
gacctcagtccagaaataacaacagaagacgtcaaagctgcctttgccccttttggcagg
atatcggatgctcgcgtcgtgaaagatatggctacggggaaatctaaaggctacggcttt
gtgtctttcttcaataaatgggatgcagagaatgccatccagcacatggggggtcagtgg
ttagggggcagacagatacggaccaactgggccacaagaaagccccctgctcccaaggcc
acctatgagaataactccaagcacctatcctttgatgacgtcatgagccagtccagcccc
agtaactgcaccgtatattgtggtggggtcagcacaggactcacagagcaactgatgaga
cagaccttctccccattcggacagatcatggaagtcagagtttttccagataaaggctat
tcatttgtgaggtttaactcccacgaatcagcggcccatgccatcgtctccgtcaatggt
tcttcaatcgagggccacatggtgaagtgctactggggtaaagagacgccagacatgatg
aactccatgcagcaggtgtccatgccccagcagaacaagattggcttcgccgcagcccag
ccctacaaccagtggggccagtggtacggcaacgggccccagatcagccagtacgtcccc
aacgggtggcaggtccccacctacggcgtctacggccaggcctggaaccagcagggcttt
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggta
atggagcccacacagggattgaatgggagtatgctagccaaccagcccggtatgggagcc
acaggataccccacgcactga
DBGET
integrated database retrieval system
