Xiphophorus hellerii (green swordtail): 116729842
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Entry
116729842 CDS
T07363
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116729842 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116729842 (fancc)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116729842 (fancc)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
116729842
NCBI-ProteinID:
XP_032434550
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Position
12:12830139..12869870
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AA seq
588 aa
AA seq
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MTELQVQQTTAHSPNVQQMPFWLEKAISWGQTDTPHTRNDIALHLKRLRDFLQQLLSEIS
SVSSTTETLNRLPLLGQLLGRLCWNPHVTAEGASRGLLLQCLLALYSEHPSNAVERKANQ
WIQKVLCHLATDEEDGAAVGLMKHLGVPTKEYHLKVLKKMVTRIQESIGNSRCSVSSTNK
GCSCGSIWTASEACVPLITCPEASPLIGALLQQRMTCIREGLSENFLDALHSAYSRCDLV
LDEQAVVSLWYQSLPSLEEAVLNLLESATTAGSTPSKVEEQVSKSLLPKACAQHCSVFLV
VNDIFRTVLKQTERNERVKNVFQTFTKCFFMELSRLQPQTSASLKAFFPQSPPSLLIPLF
TMPSEMPQESLKNHLIWVSSSLQRLTEEEEDEEDSDSSNIRGNHKVFEAWFLLVQCGYWV
QVLVQLLVTSSPEDCGPLLWLLTFYHHPTNRWHHRASQLVQAKAAWDHLYSLFSIVAHLL
PADHLQSFISLLAPKPQQPSLAPSLTLNLLVNFATFGQLPQSISAEITQKVVHQSGLQDE
AARVLSSLRLRLNDRGSFPNDRVQLRIEELHNTIKNKCKPDAPSQTDT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcaggttcagcaaacaacagcacactcgccaaatgttcagcagatgccc
ttctggcttgaaaaagccatctcttggggccaaactgacactccacacacacggaacgac
atcgccctacacttgaagagactgagggatttcctccagcagcttctctcagaaatcagc
agtgtgagctccacaacagaaaccttgaataggctccccttattaggtcaacttttaggc
cgactgtgctggaaccctcatgtcactgcagaaggtgcaagtagaggacttctcctccag
tgtttgttggctctgtattctgagcatccaagcaatgcagtggaaagaaaagccaaccag
tggatacagaaagtcctgtgtcatctggctacagatgaagaagatggtgcagccgtggga
ctgatgaagcatttaggagtgccaaccaaagaataccatcttaaagtgctgaaaaagatg
gtgacaagaatacaggaaagcattgggaatagtcggtgttctgtgagcagcacaaataag
gggtgttcatgtggcagtatttggactgcgtcagaggcttgtgtgcctctcatcacatgt
cctgaagcatctcctctcattggtgctttgctgcaacagcggatgacttgcatcagagaa
ggtctgagtgaaaacttccttgatgctctacactctgcctactcaagatgcgacctggta
ctggacgagcaggcagttgtttctctgtggtatcagagcttacccagcctggaggaagct
gtgctcaatctgttggagtctgctactacagcaggatcaacaccaagcaaggtggaggag
caagtgtcgaagtcattactgcctaaagcttgtgctcagcattgttcagtattcctggtt
gtaaatgacatcttcaggactgttcttaaacagactgaaaggaatgagcgtgttaaaaat
gttttccaaacatttaccaaatgcttcttcatggagctttcacgattgcagcctcagaca
tctgcgtctttaaaagccttcttcccacagtcccctccaagtcttctgattcctctcttt
accatgccttcagagatgcctcaggagagtttgaaaaaccacctgatatgggtcagcagc
tcattacagagactgactgaggaggaagaagatgaggaagactcagatagtagcaatatc
agagggaaccataaagtctttgaggcgtggttcctgctggttcagtgtggctactgggtg
caggtgctggtccagctgctggtcacatcaagtcctgaagactgtggtccccttctctgg
ttactgaccttttatcatcaccccaccaacaggtggcaccacagagcttcacagctggtc
caggccaaagcagcgtgggaccacctgtacagtcttttctccattgtagctcatcttctt
cctgctgaccacctgcagtcttttatcagtctgctggcaccgaaacctcagcagccgtca
cttgccccgtcgttgacccttaaccttttggttaactttgctacttttggtcaacttcca
cagagcatatcagcagagattacacagaaggtggtgcatcagtctggtctgcaggatgaa
gcagcacgtgttctcagctcgctgcgtctcagactgaatgaccgaggcagcttcccaaac
gacagagttcagctcaggatcgaggaacttcacaacacaataaaaaataaatgtaagcca
gatgcaccctcacaaactgacacatag
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