Xiphophorus hellerii (green swordtail): 116729896
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Entry
116729896 CDS
T07363
Symbol
snx2
Name
(RefSeq) sorting nexin-2 isoform X1
KO
K17917
sorting nexin-1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116729896 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116729896 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116729896 (snx2)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Macropinocytosis
Sorting nexins
116729896 (snx2)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116729896 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR_3_WASP_bdg
Sorting_nexin
DUF3557
YwqH-like
HR1
V-ATPase_G
DUF4618
MetOD2
Motif
Other DBs
NCBI-GeneID:
116729896
NCBI-ProteinID:
XP_032434645
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All DBs
Position
12:1371640..1393513
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AA seq
514 aa
AA seq
DB search
MADTARDPSPDRTDFHEVEDGEDLFPEPSAETPESQPASLSAVDISTNANGPKQDSFFDD
DNEDLFAEATEEVSLDSPERDVLLSDGPSPAITPITPPTSVITPRIGHTHDDMFTHSSFD
EIEEEESGDSFDIHISVSDPEKIGDGMNAYMAYKVTTKTSMSLFKQRDFAVKRRFSDFLG
LHSKLASKYLHIGYIVPPAPEKSIVGMTKVKVGKEDQSSNEFVEKRRSALERYLMRTVKH
PILLKDPDVLQFLESTELPRAVNTQALSSAGILRMVNKAADAVNKMTIKMNESDAWFEEK
QQHFENLDLQLKKLHASVESLVCHRKELSVNTAQFAKSAAMLGNSEDHTALSRALSQLAE
VEEKIDQLHQDQANADLYLFSELLGDYVRLIGAVKGVFDHRMKTWQKWQDSQMLLQKKRE
AEAKLQFTNKPDKLQQAKDEIKEEIEELEGKVQQGERDFEQISKTIRKEVSRFEKERVKD
FKMIIVKYLESLIQTQQQLIKYWEAFLPEAKAIS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacagcccgggacccttcaccggaccgaaccgacttccatgaggtggaggac
ggagaggacctgttcccggagccgagcgccgaaaccccggagtcacaaccagccagtctg
tctgctgtggacatcagcaccaacgcaaatggacccaagcaggactcattttttgatgat
gacaacgaggatctgttcgcagaggctacagaggaagtgtcgttggacagtccagagaga
gacgtcttgctgtctgacggcccgtcgcccgccatcactcccatcacgccccccacctct
gtgataactcctcgcattggccacacacatgacgacatgttcacacactcctcctttgac
gagattgaagaggaagaaagtggagattcattcgacatccacatatcagtgtcagatcct
gagaaaattggtgacggtatgaacgcatacatggcctacaaggtgacaacgaagacctcc
atgtctctgtttaagcagagagacttcgcagttaaaaggcgtttcagtgattttctgggt
ctgcacagtaaactggcctccaagtatctgcacatagggtacatcgttccccctgcacca
gagaaaagcattgtggggatgaccaaagtgaaggttgggaaggaggatcagtcatccaat
gagtttgtggagaaacggaggtctgcactagagaggtatctgatgagaacggtcaaacat
cccatcctgctgaaggatcctgacgtcctgcagttcctggagagcaccgagctgccgcgc
gccgtcaacacccaggctctgagcagcgccgggatcctccggatggtcaacaaggccgcc
gacgccgtcaacaagatgaccatcaagatgaacgagtcggacgcctggttcgaggaaaag
cagcaacactttgagaatctggacctgcagctcaagaaacttcacgccagcgtggagtcg
ctggtctgtcacaggaaagagctgtctgtaaacacggcgcagttcgccaagtcggcggcc
atgttggggaacagcgaggaccacacggcgctgtccagagctctgtcccagctggccgag
gtggaggagaagatcgaccagctgcaccaggaccaggccaacgccgacctgtacctgttc
tctgagttactgggcgactacgtccggctgatcggcgccgtcaagggagtgtttgaccac
cgcatgaagacgtggcagaagtggcaggacagccagatgctgctgcagaagaaacgggaa
gctgaagccaaactgcagttcaccaacaaaccggacaaactgcagcaggccaaagacgag
atcaaagaggagattgaggagttggagggaaaagtccagcagggcgagagagacttcgag
caaatctccaaaaccatccgcaaagaagtcagcaggttcgagaaagagagagtaaaggac
ttcaaaatgatcattgttaaatacctggagtcgctgattcaaacacagcagcagctcatt
aaatactgggaagccttcctccctgaagccaaggccatctcatag
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