Xiphophorus hellerii (green swordtail): 116729900
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Entry
116729900 CDS
T07363
Symbol
adamts13
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116729900 (adamts13)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
116729900 (adamts13)
Peptidases and inhibitors [BR:
xhe01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
116729900 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
TSP1_spondin
TSP1_CCN
Reprolysin_3
Reprolysin_5
Reprolysin_4
Reprolysin_2
Adt-1
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
116729900
NCBI-ProteinID:
XP_032434651
LinkDB
All DBs
Position
12:24650690..24666397
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AA seq
1408 aa
AA seq
DB search
MSRREHXYIYSLSVTAEQVDTQKKGGEKMFILTAVCLLLLLPGFSAVMGSPQDEPQENVS
TLDSSADTTVSDRLRHSTLIPDITHLELLVVVGPDVQQVHKQDTERYILTNLNIASELLR
DMTLGANMRVHLVRMIILSEPEPEIQMSTNITSSLRSVCDWGRRINPSNDSDPLHADLLL
YITRYDLELPNGNKQVRGVTQLGGVCSSDWSCVITEDTGFDLGITIAHEVGHSFGIDHDG
SANGCSRSSFMMASDGGYNSVDLTWSPCSRHQLLTFFSEGRAECVKDFPALGGSLQDWKP
GLYYGVDDQCRIAFGSTARACSFSNPDLPACRALSCHVKPQDISSCKRLLVPLLDGTECA
PNQWCLKGRCVSPDDFGVSVVVNGSWSSWSGFSSCSRTCGGGVMLRTRECNNPRPAFGGN
DCDGPDIEAELCNQLPCEQTQLDFVAEQCSQTDPQPLYLLPNTASFYKWIPAIGFVKGDE
QCRYMCQSDGESFIVSRGSYFADGTRCKSDISTPYGATAACLRGRCQVFGCDGVLHSGKA
WDVCGVCGGDGSTCILTSDSYSGGGAKDYNTFLTLPVNATQVHIVNRAPVFTHLAMMVGD
QYIVSGSGTMALNTTHPSPLDDDYVQYRLHLTPDLLPEMEEVVVPGPLKQEMTIQVYRKY
GKEYGEKTNPNISFQFYVPRNKSLTDSSPRGKWAPLATPCSVTCGLGIQKNEHVCIDEDT
NKLLKPHYCKAPPPPTALHTTCQLPSCPPRWDAGNFGVCSASCGGGFRVRHVRCVQKRES
DVVKVPDSECSADTAPHPLEKCNLHHCPARWSVSEPGNCSAVCGPGEAERNVSCIRQEDG
LDVEVDHSFCLNQIKPPDSVPCVVDVCPIGWDSKVEERPSLKSGLLPRSRQAPVYVWSPV
VSQCSRSCGNGNLQVWFSCVDHQTRLGVPDFHCDSSSKPDPHTEMCGFSPCPPKWRSKQG
VCSVTCGGGAAKRVLYCARETDGEEEEVLEDYNCSGFPKPTAVVSCNTHSCPARWKVFRT
SPCSVSCDLGVAQRNVSCVQFVHGKESVVPEDGCRAAVKPATTVPCLVQVCTFKWEVKPW
SQCSASCGYGIQSRAVSCMGPPKPEPLSPLFCMHMPKPITIRGCDTGSCRDVALNKTTQT
LKANSTEKALPSPPPVHKDASRRRMGSLPPRPTETMAIKEATTATPTPKPNACGLLLLEE
SGTVDLHNAPSRCTVSVGRPLDEVISITLISSSLDCRKREYVAFFDRLAFVRKCVQAAGS
ELTTRTNVLLVRQSLVTPGNGVVFTYRSKKNTKRSHHQDCDIQLFSPSGIFENPVTSNTS
RTCRVLINAPPSVKIRIQALHIALPFNTTSAQSTYIMIRDMDVLKTNVFNGQQLFLWHSS
GNMAEVEFHGDYLYSQGTFRAEYSFVRL
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggagggaacatnnatatatatatagtcttagcgtcacagcagagcaggtagac
acacagaaaaaaggaggggaaaaaatgtttattctgactgcggtctgtcttctgctccta
ctgcctggcttcagcgctgtaatgggatctcctcaggatgagccacaggaaaatgtctcc
actctagattcctctgcagacactacagtaagcgaccgtttgcgtcactccactctgatt
cctgacatcacgcatctggagctgctggtggtagtggggccggacgtccagcaggtccac
aagcaggacacggaacgatacatccttaccaacctcaatattgcctctgagctgttgaga
gacatgaccctgggtgccaacatgagggttcacctggttcgcatgatcatcctatcggag
ccagagccagagatccaaatgtccaccaacatcacctcgtctctgagaagtgtgtgtgac
tggggcagaaggatcaacccctcaaatgactcagacccgctacacgctgacctcctgcta
tatataacgaggtatgacttggagctgcccaatgggaacaagcaggtcaggggggtgaca
cagctgggaggggtctgctccagcgactggagctgtgtgatcacagaggacacgggcttc
gacctgggcatcaccatcgctcatgaagtcggccacagcttcggaatcgaccatgatgga
tcggcgaacggctgcagtcggagcagcttcatgatggcctcggatggaggctacaacagc
gtggatctgacctggtccccctgcagtagacatcagcttctcaccttcttcagtgaaggg
agagctgaatgtgtgaaggatttccccgcactgggaggctccctgcaggactggaagccc
gggctgtattacggagttgatgaccagtgtcgcatagcctttggcagcactgccagagct
tgctctttctccaatcctgacctgccggcttgccgtgctctgtcctgtcatgttaaaccc
caagacatcagctcctgtaaacgcctcctggttccactgctggatggaacagagtgcgca
cccaatcagtggtgtctgaagggacgctgtgtgtccccagatgacttcggcgtctctgtc
gtagtcaacggctcctggtccagctggtctgggttttcctcctgctcccggacgtgtggc
ggaggggtcatgctccgtacaagggaatgcaacaacccaagacctgcttttggagggaat
gactgtgacggcccagatattgaggctgaactttgtaaccaactgccttgtgagcagacc
cagttggacttcgtggcagagcagtgttcccaaacagacccccaacccttatacttgctt
cccaacactgcctcgttctacaaatggatccccgctatcggctttgtcaaaggagatgag
cagtgcagatacatgtgtcagtcagatggagagagcttcatagtgagccgtgggtcttat
tttgcggatgggactcgctgcaagtcagacatttcaactccttacggcgcaacagctgct
tgtcttcgagggagatgccaggtgttcggctgcgatggcgtgctgcactctgggaaagcg
tgggatgtgtgcggggtgtgtggtggagatggatccacctgcattttgacatccgactcg
tacagtggtggtggtgccaaagactacaacacttttctcactctgccggtgaatgccact
caggtccatattgttaacagggcgcctgtcttcactcatttagctatgatggttggggat
cagtacattgtgtctggatcgggtaccatggctctgaataccacccatccctcaccgcta
gatgatgactatgtacagtaccgccttcacctgactcctgaccttttacctgagatggaa
gaggtggtagtacctggacctctgaaacaggagatgaccatacaggtctatcgcaaatat
ggaaaggaatatggggaaaaaacaaatccaaacattagctttcagttttatgtgccaaga
aacaagtctttgacagacagctcacctagaggcaaatgggctccgttagcaacaccctgc
tctgtcacttgtggattgggtatacagaagaatgagcatgtctgcatagatgaagacacc
aacaagcttttgaagccacactactgtaaagcccctcctccacccacagcactacacaca
acctgtcagcttccatcctgtccccccaggtgggatgcaggaaatttcggggtctgcagt
gcctcctgtggcggcggatttcgggtgcgtcacgtgcgatgtgttcaaaagcgtgaatcc
gacgtggtaaaggttcccgattcagagtgctccgcagataccgctccccaccctttggaa
aaatgtaacctgcaccactgccctgccagatggtctgtctcagagccgggtaactgctct
gctgtgtgtggaccgggggaagcagaacgcaacgtgtcttgcatccggcaagaagacggc
ttagatgtcgaggtggaccatagcttttgtttaaatcagatcaaacctccagattcggtg
ccatgtgtggtggatgtctgccctatcgggtgggactctaaggtggaggagcggcccagt
ttaaagtctggcttgcttccacgctccagacaggctcctgtgtatgtctggagccccgta
gtcagccagtgttctaggagctgtgggaatggaaacctacaggtttggttttcttgtgtg
gatcaccagaccagactgggggtccctgacttccactgtgactcctccagcaaaccagat
ccgcacactgaaatgtgtggtttttctccctgccctccaaagtggcgctctaagcaagga
gtctgcagcgtaacgtgtggaggaggggcagccaagagagtgctgtactgtgctagagag
acagatggagaggaggaggaggtgttggaggattacaactgcagcggctttcccaaacca
acagcagtggtttcatgtaatactcacagctgccctgcaaggtggaaggtatttaggaca
tcgccctgctctgtgtcctgcgacctgggtgtagctcagaggaatgtgtcctgtgtccag
tttgttcacgggaaggagagcgtggtgccagaggacggctgccgtgcagctgtcaaacct
gccaccactgtgccttgcctggtgcaagtgtgcaccttcaagtgggaggtgaaaccatgg
agccagtgttcagcatcctgtggatacggtatccagtcccgagctgtgtcctgtatgggc
ccccctaagcctgagcccctcagccctctattttgcatgcacatgcccaaaccgatcaca
atcagaggctgcgacacgggcagctgcagagacgtggccttgaacaagaccactcaaacc
ctgaaagcaaactccacagaaaaggctcttccatctcctcctccggttcataaagatgcg
tcacggcgccgcatgggcagccttcctccgaggccaacagagaccatggccatcaaagag
gccaccacagccactccaacgcctaagcctaatgcatgtggacttctactgctggaggaa
tcaggcaccgtggatttacacaatgcgccgagcagatgcacagtgtcagtaggtcgaccc
ctcgacgaggtcatcagcatcacactcatatccagctctttggattgcagaaaaagggaa
tacgtggcgtttttcgatcgtctggctttcgtgaggaagtgtgtacaggcagcaggcagt
gaactgaccaccagaaccaatgtcctgcttgtccggcaaagtctggtcactcctggaaat
ggggttgtgtttacctacagatcgaagaagaacacgaaaaggagtcaccatcaggattgc
gacattcagctcttttcccccagcggcatttttgagaatccagttacgtccaacaccagc
cgcacctgccgagtgctcatcaacgcccctccctcggtgaagatcaggatccaggcgctc
cacatagcgttaccattcaacaccaccagtgcccagtccacatatatcatgatccgagac
atggacgtcttaaagaccaacgtgtttaacggccagcagctgttcctgtggcactcctct
ggaaatatggctgaggttgaatttcatggcgactacctgtattcccaaggaaccttcaga
gctgaatactcctttgtgcgactttga
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