Xiphophorus hellerii (green swordtail): 116729918
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Entry
116729918 CDS
T07363
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116729918 (fem1c)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
116729918 (fem1c)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_2
TPR_10
TPR_1
Motif
Other DBs
NCBI-GeneID:
116729918
NCBI-ProteinID:
XP_032434689
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Position
12:complement(14386883..14397642)
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AA seq
617 aa
AA seq
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MDLKTAVYNAARDGKLRLLQKLLENKDGHEVTKLMGEKTNGATPLLMAARYGHLDLVEYL
LECCCAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVRYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLEIMRMLLQYGATMERDGYGMTPLLSASVTGHTNIVDYLTTHQQTS
HTERIDALELLGATFVDKKRDLLGALKYWKRAMDLRYTDSNTVHKPEPKHLIMAYDYAKE
VTNGEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINLW
KYALEMQQNNLDPLSPMTTSSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILTKSVLE
IERAVKQIGPMPPDPAQLSKALSIILHLICLLEKVPCTTEQDHFKKETIYRFLKLQPCGK
NGFTPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNGH
PDIMNLLISCGNHFDSTNAFQQTACDLLDEKELARNVIQPINHTTLQCLAARAIIKHSLH
YRGNIPEKLEAFVLLHR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagacggcggtgtataacgcggccagggacgggaaactccgtttgcttcag
aaactgttggagaacaaagatggacatgaagtcaccaagctgatgggcgagaagacgaac
ggagccaccccgttgctgatggccgcccggtacggccacctggacctggtggagtacctg
ctggaatgctgctgcgctccggtcgaggtcggaggctcggtgaactttgatggggagaca
atagagggggcgccgcctctctgggctgcctctgcggcgggtcacctgaaggtggtccag
tccctgctggggcacggagcttctgtcaacagcacgaccctcaccaactctacgcccctg
agggcagcctgctttgacgggcacctggacatcgtcagatacctagtggaacacaaagct
gacctggaggtggccaacagacacggacacacgtgtctaatgatttcctgttacaagggc
cacaaagagatagcgcagtacctgctggagaaaggtgcggatgtcaacaggaaaagtgta
aaaggtaacacggcgctgcatgactgcgcagagtccggcagcctggagatcatgcggatg
ttgctgcagtacggcgcaaccatggagcgggacggctacggcatgactccgctcctctcc
gccagcgtcactggccacactaacatcgtagactacctgacgacgcaccagcagacgagt
cacacggagcgaattgatgccttggagcttttgggagcaacgttcgtcgacaagaagaga
gatctgctgggagcgttaaagtattggaagagagccatggacctgagatacacagacagt
aacaccgtccacaaaccggaacccaagcatctcatcatggcttacgactatgctaaagag
gtcacaaacggggaggagctggacgggttgatctccgacccggacgagatgcggatgcag
gcgctgctcatccgggagagaatcctgggcccccagcatccagacacatcctactacatc
cgttaccggggcgccgtctacgccgactcgggaaactttgagcgctgcatcaacctgtgg
aagtacgcgctggaaatgcaacagaacaacctggacccgctgagccccatgacgacctcc
agcctgctgtcgttcgccgaactcttctccttcatgctgcaggacagggccaagggactc
ctggggacatccgtgtcctttgaggacctgatgggaatcttgaccaagagcgtgttggag
atagagcgagcggtcaaacagatcgggccgatgccgcctgaccccgctcagctcagcaag
gccttgtcgattatcctgcacctcatttgtctcctggaaaaggtgccgtgtaccacagag
caggaccatttcaagaaggaaaccatctataggttcctgaagctccagccgtgtgggaag
aacggcttcacccctttacacctggcagtggaccgcaacaccacctgcgtgggccgctac
cctgtgtgcaagtttccctccctcacggtggcgtccatcctcctcgagtgcggggcggat
gtcaacagccgagacgaagacgacaacagccccctccacatagccgcatccaacggtcac
cccgacatcatgaacctgctgatttcctgcgggaatcacttcgacagcaccaacgccttc
cagcagacggcctgcgatctcctggacgagaaggagctggcccggaacgtcatccagccc
atcaaccacaccacgctgcagtgcctcgctgccagggccatcatcaagcacagcctccac
taccgggggaacattcccgagaagctggaagccttcgtcttgctccacagataa
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