Xiphophorus hellerii (green swordtail): 116729942
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Entry
116729942 CDS
T07363
Name
(RefSeq) low molecular weight neuronal intermediate filament-like
KO
K04572
neurofilament light polypeptide
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116729942
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116729942
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116729942
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
116729942
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
TolA_bind_tri
DUF2594
Motif
Other DBs
NCBI-GeneID:
116729942
NCBI-ProteinID:
XP_032434739
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Position
12:30664105..30671169
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AA seq
521 aa
AA seq
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MSYSSDVYSSSSYRRIFGEAPRSGRVGLGSGGGSPSRLHSAGYRSSHRAYGSPSAVSSAA
YRRTAAPGRVFSSIPDSAMDLTQSTAVTNELKIIRTNEKEQLQGLNDRFVSFIEKVHNLE
QHNKVLEAEVTLLRQRHSEPSRLHELYEQEIRELRARVEELTHEKSQMHLDCVQMNETLE
RVREKLEEESRLRKEAEGALKDYQKDVDDATLARLELEKKVESLLDEIAFLRKVHEEELQ
ELQASLQATQVSVEMDMSKPDLAAALKDIRAQYENLSARNQVQAEEWYRSKFATVTEAAA
RNHDAIKHSKEELSEYRRQVQARTLEIEALRGHNEALERQIAEMEDRHNNEIGEMQDTIQ
QLEAGLRSTKGEMSLHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVGSAMVQSGY
PGLSYTSARAYALGAYRKPKPEEEAGEDEEKEEEEEAGEEEEGEEGEEQEEDEGEAEEEE
EEEGEGEEEEEEEEEEKPKEKEKGKEKEKEKESSTGKSSKS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccagcgacgtttacagcagcagctcctatcgcaggatcttcggagaagcg
ccccggtcaggtcgcgtgggtctgggtagcggcggcggcagcccgtcccgcctgcactcc
gcgggataccgcagcagccaccgcgcttatggctccccttccgcggtctcctccgccgcc
taccgcaggacggcggcgcccggccgcgtcttctcctccatcccggactccgccatggac
ctgacccagtccaccgccgtcaccaacgagctcaagatcatccgcaccaacgagaaggag
cagctgcagggcctcaacgaccgcttcgtgtccttcatcgagaaggtgcacaacctggag
cagcacaacaaagtcctggaggccgaggtgacgctgctgcgccagcgccacagcgagccg
tcgcgcctgcacgagctctacgagcaggagatccgcgagctgcgggcgcgcgtggaggag
ctgacgcacgagaagagccagatgcacctggactgcgtccagatgaacgagacgctggag
cgcgtgcgggagaagctggaggaggagagcaggctgcgcaaggaggcagagggcgccctg
aaggactaccagaaggacgtggacgacgccacgctggcccgcctggagctggagaagaaa
gtggagtcgctgctggacgagatcgccttcctcaggaaagttcatgaagaggagctgcag
gagctgcaggcgtccctgcaggcaacgcaggtgtcagtggagatggacatgagtaaaccg
gacctggctgcagccctgaaggacatccgggctcagtacgagaacctgtcggcccggaac
caggtccaggccgaggagtggtaccgctccaagtttgccactgtgacagaggccgccgcg
cgcaaccacgacgccatcaagcactccaaggaggagctcagcgagtaccgtaggcaggtg
caagcccgcaccctggagatcgaggccctccggggccacaacgaagccctggagaggcag
attgccgagatggaagaccgtcacaacaatgaaattggagagatgcaagacactatccag
cagctggaggctggcctgcggagcaccaagggagagatgtctcttcacctgcgtgaatac
caggacctgctgaatgtcaagatggcactggacatcgagatcgccgcttacaggaagctt
ctggaaggcgaggagtgccgcctcagctcggtgggcagcgctatggtccagtctggctat
cctggtctgtcctacacatcggcccgcgcctacgccctcggagcttacaggaagcccaag
ccggaagaggaggcaggagaagacgaggagaaggaggaagaagaggaagcaggagaggag
gaggagggagaagagggagaggagcaggaggaagatgagggagaagcagaggaagaggag
gaggaagaaggagagggagaagaagaagaagaggaggaggaagaggagaagccaaaggaa
aaggagaagggaaaggagaaggagaaggagaaggagagctccaccggaaagagcagcaag
agctaa
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