Xiphophorus hellerii (green swordtail): 116730005
Help
Entry
116730005 CDS
T07363
Symbol
nol6
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116730005 (nol6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116730005 (nol6)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116730005 (nol6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
116730005
NCBI-ProteinID:
XP_032434833
LinkDB
All DBs
Position
12:19722228..19740545
Genome browser
AA seq
1145 aa
AA seq
DB search
MKKKQTVTEEPVEMHPSDFPHGDEEEQLGAPKKPKRMKSIEEEEVVYHPVKLSRNDLYRP
PTAEELNHLKEAESLFHCSLLKMQMEELLKEVSLSERRKQQIDSFVKTVTKLLETVPVSP
KVEVSDLSWLSGTVKVPFLLVPKVTKGKFHMAPPASVDLIGSYPLGTCVKPHIKVDLAAT
IPADVLHPKDFLNQRYPRKRALYLAGLAQHLRSSSDVGELRYSCLHGNRLKPVLLLSPPG
KDSSSFTVCVHACPPPGFFKPSRFHPQRNNIRTEWYTGLQASHDENSEPPTPHYNGSILG
DLLPRAHLQFLSAIGSQCSAFSDGVALLKVWLHQRELDQGAGCFNGFLASMLLAYLLMNH
RISNTMTAYQLLRNSLNFLASTDLSVSGISLAKDPDSTAPSLAEFHNAFQVVFVDPSGHL
NMCADMTASTYKQLQHEASVSMQFWDDPTVDGFHCLLMTPKPMIRTSDCVFQLCDLVKLQ
ASCKKQNLLSELMDHSGNYVQTVLPFLLALLQQGLNQRIRLLTHSLSPDPEWSVERETPK
YKAQPPLSFGLLLNPELAASVLEKGPPADSPKAAEFRQLWGSRSELRRFQDGAITEAVLW
DGKSAYQKRLVPNQIITHLLQLHAGIPESCVRFVGTMVDDVITTGNEVPSTGEEESLVVV
QSVRNLSRKLWKLEGLPLSITAVQGAHPALRYTQVFPPEPVRLDYSFFEREKSCRFLVPK
EGKPCPHYLTPITVICHMEGSGKWPHDRTAIRHIRAAFHISLAEMLKKHHNYTCLPCPTH
LDVWKDGLVFRIQVAYHREPQVLRESVNAEGLLVVRDNEEAQVLEMATIHKPLLTSTLHG
LQQQQPCFGAVCRLAKRWLAAQLFSEDITEDTADLLVASLFLQPTPFTPPGSPQAGFLRF
LRLLSAFDWRNNPLVVNLNKQLTAAEYTEIKNDFMASRESLPVMFIATPTDKKMSLWTRR
APSVQMLQRVMTVAAESLKVLEQQLMDGSQIQDVRVIMRAPLDAYDVLIHLNPKQVPLLR
HAVDAPSVTFSRGVMTNGADQAGGAFPVVDYNPVSLYLTELREAFEDLALFFCDPYGGTV
ISVLWKPKAFVPAPFKTSHMAARSVEVTGGEVKTIPNVEAILEDFRVMGKGLVKSVDART
EKWMF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaagcagacagtaacagaagagcctgtagagatgcatccatctgatttcccc
catggtgatgaagaggagcagcttggtgctccgaaaaaacccaaaaggatgaaatccatt
gaagaggaggaggtggtctaccatccggtgaaactatcccggaatgatttatataggcca
ccaacagctgaggagctaaatcacctaaaagaagccgaaagtctgttccactgcagcctt
cttaagatgcagatggaggagctgctgaaagaggtttccctgagtgaacggaggaaacag
caaatcgactcttttgtaaagaccgtcaccaagctgctggagactgtgccagtgtcacca
aaggttgaggtaagcgatttgtcgtggctgtctggtacagttaaggttccttttctcctg
gtgcccaaagtcacaaagggaaagtttcacatggcccctccagcatccgttgatctgatc
gggagctacccccttggcacctgtgttaagccacacatcaaggtggacctcgctgctaca
atcccagctgatgttttgcacccaaaagatttcttaaaccagaggtatccaaggaaaagg
gccctctatcttgcaggacttgcccaacacctgagatcctcctctgacgtcggggagttg
cgttattcctgtctccatgggaacagactcaaaccggtcctgctgctgagtccccctggc
aaagactcttcaagcttcactgtctgtgttcatgcctgcccgcctcctgggttcttcaag
cccagtcgtttccacccccagaggaataacatcaggacagagtggtatactggactgcag
gcttcccacgacgagaacagcgaacctccgactccacactacaacggctctattttggga
gatttattgcccagggctcacctccagtttctgtctgccatcggctctcagtgctcggct
ttttctgatggagtagcgttgctgaaagtctggcttcatcaaagagagctggaccagggt
gctggttgcttcaatggattcctcgcctccatgctcttggcctacctgttgatgaatcac
aggatcagtaacaccatgacagcctatcagctgcttcgaaacagcttgaatttcctagcc
tccacggacctgtctgtgagcgggataagcctagccaaggatcctgactccacagctccg
tctcttgctgagttccacaacgctttccaggttgtgtttgttgacccatcagggcatctt
aacatgtgtgcagacatgaccgcttccacctataaacagctgcagcacgaggcgtctgtt
tcaatgcagttctgggacgacccaacggtggacggcttccactgcctcctcatgactccc
aaaccaatgatcaggacgagcgactgtgtcttccagttatgtgacttggtgaagcttcag
gctagctgcaagaaacagaatctgctcagtgagttaatggaccacagtgggaattatgtc
cagactgtgctgccatttcttctggcgctgctccaacaaggactcaaccaaagaattcgc
ctcctcacccactccctgtctcctgacccagagtggtctgtggagagagaaacaccaaag
tacaaggctcagcctcccctttcctttggtttgctcttgaatccagagctagcagcttct
gtcctggaaaaggggccacctgcagacagccccaaggcggctgagttccgtcagctgtgg
ggttctcgctccgagctgcgtcgcttccaggatggcgccatcaccgaggcggtgctgtgg
gacggaaagagcgcgtaccaaaagaggctggtccccaatcagatcatcacacacttactg
cagctacacgcaggtatcccagagtcctgtgtgcgttttgtcgggaccatggtagatgac
gtcatcacaacaggaaatgaggtacctagtactggggaagaggagagtttagtcgttgtg
cagtcagtacgaaatctgagcaggaaattgtggaaactggaaggtctgccactttctatt
actgcagtccagggagcccaccctgcccttaggtacacacaggtttttcctccagagcca
gtgaggctggactattccttctttgagcgagaaaagtcttgtaggttcttggtcccaaag
gaaggcaaaccttgtccacattatctcacccccataacagttatttgtcacatggagggg
agtggcaaatggcctcatgaccgaactgcaatccgccacattcgagctgctttccacatc
agcctggcagagatgcttaagaagcaccacaactatacctgcttgccctgtcccactcac
ttagacgtgtggaaggatggtttggtgttccggatccaggtggcgtaccaccgtgagcct
caggtgctgagggagagtgtgaatgctgaaggcctgctggttgtcagggacaatgaggag
gctcaggttctggagatggccactattcacaagcctctccttacaagcacattgcatggt
ctccagcagcagcagccatgttttggagccgtgtgtcgcctggctaagcgctggctcgcg
gctcagctcttcagtgaagacatcacagaggacacggcggatctgctggtggcatcgctt
ttcctgcagcctaccccctttactcctccaggctctccgcaggcgggtttcctccgattc
cttcgtttgctctctgcctttgattggcggaacaacccgctggtagtcaacctcaacaag
cagctcacagccgcagagtacacagagatcaagaatgacttcatggcctccagagagtct
ctgcccgtcatgtttatagcaacgcctacagacaaaaagatgtctttgtggaccagacgg
gcacccagcgtgcagatgcttcagcgtgtgatgacagtggctgctgaaagcctcaaagtt
ctggaacagcagctaatggatggcagccagatccaagatgtcagggttattatgcgcgct
ccacttgatgcctatgatgttttgattcacctgaacccgaagcaggttcctctgctcaga
catgctgttgacgctcccagtgtcacgttcagcaggggagtgatgactaatggtgcagat
caggctggaggagcgttccctgtcgtcgactacaaccctgtgtctctctacttgacagaa
ctcagagaggcatttgaagacctggccctcttcttctgtgatccatacggtggaacagtg
atctcagtcttatggaaacctaaggcttttgtccctgcaccttttaaaacgtcgcacatg
gctgcccgcagcgtggaggtgacagggggcgaggtaaaaaccattcccaatgttgaagca
atcctggaagacttccgtgtgatggggaagggcttggtgaagtcagtggacgcaagaact
gagaaatggatgttttag
DBGET
integrated database retrieval system
