Xiphophorus hellerii (green swordtail): 116730032
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Entry
116730032 CDS
T07363
Symbol
rtn4r
Name
(RefSeq) reticulon-4 receptor
KO
K16659
reticulon-4 receptor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
116730032 (rtn4r)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
Receptors
116730032 (rtn4r)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
116730032
NCBI-ProteinID:
XP_032434865
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Position
12:complement(8743721..8797571)
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AA seq
467 aa
AA seq
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MRTVVFDGGRLLFLVMWLNLLPQTDSCPAKCVCYSEPRPTVACQQQGLFSIPTVIPVRSQ
RIFLQSNKLTVVRSTSFSSCHNLTVLWLYSNNITYIEAGAFFGLEKLEELDIGDNSNLRT
INPTAFRGLTKLHTLHIHRCGLSELPVGVFRGMFSLQYLYLQDNNISTLHDDTFVDLANL
TYLYLHNNKIKIVTDNMFRGVINLDRLLLHQNQVIFVQPRAFSDLGKLKSLFLFFNNITV
LTGETMDPLVSLQYLRLNGNQWICDCRARTLWDWFKRFKGSSSELECYVPEFLAGKDLKQ
LKSEELEGCVETSQIQTTLFNSKAQSGKFSSTESPLGDNIPKCCLGDNDKSSILSGKSRQ
ITNNPPKEKENMSKTKYKQQERTKNETQNKQNDGPLGTLSNNLDKTLENLNPEFIENPES
STASNKKKKKCSRKTKLDSHCSKSQSSTLQVLHFLIIPMIWISLAMS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtcgtttttgatggggggcgactccttttcctggtgatgtggctgaaccta
ttgcctcaaactgacagctgccctgccaagtgtgtgtgctacagtgagcccaggcccact
gtggcttgccaacaacaaggactgttttcgattcctacagtgattcctgtacggagccaa
cggatattcctccagagtaacaagctgacagtggtgaggtccactagcttcagttcttgc
cacaatcttactgttctctggctctactcaaacaacataacctacatcgaggctggagcc
ttttttggtctggaaaaactggaggaactggatattggagataacagcaacctccgcacc
attaatccaacggcctttcggggtttaactaagctgcacaccctccacattcacaggtgt
ggcctgtcagagctccctgttggggttttcagaggaatgttctctctccagtatctttac
ttgcaggataataacatcagcactctgcatgatgacacctttgtggaccttgccaatctc
acttatctctacctgcataataacaagatcaagatagtaacagacaacatgtttcgtggc
gtaataaatctggacaggctactgctacaccagaaccaggtaatctttgtacaacccagg
gcttttagtgatctcggaaaactaaaatccttgttcctgttcttcaacaacattactgtc
ttgactggggagacaatggatcctctggtttcccttcagtacttgcgcttaaatgggaat
cagtggatttgtgactgccgtgcgaggaccttgtgggattggttcaaacgtttcaaaggc
tccagttcagaattggagtgctatgtcccagagttcctggcaggaaaggatctgaaacaa
ctgaaaagtgaagaattggagggatgtgttgagacatcacaaatccagacaactctcttt
aactccaaggcacagtctgggaaattttcctcaactgaaagccctctaggggacaacatt
cccaagtgttgtcttggagataatgacaaatcctccatcctttctggaaagagtcgccag
atcactaataatccccctaaggaaaaggagaacatgtccaagaccaaatacaagcagcaa
gaaagaacaaaaaatgagacccagaataagcaaaatgatgggccactggggaccttatcc
aacaacctggacaagacattggaaaacctaaaccctgaattcatagagaatccagaatca
tctacagcatcaaacaaaaagaaaaagaagtgttccagaaaaacaaaattggattcccac
tgcagtaaaagccaaagctctactttgcaagtgctgcactttctcatcattcccatgatt
tggatatctctagccatgtcttag
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