Xiphophorus hellerii (green swordtail): 116730235
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Entry
116730235 CDS
T07363
Symbol
rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116730235 (rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116730235 (rapgef1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
116730235
NCBI-ProteinID:
XP_032435169
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Position
12:231638..266142
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AA seq
897 aa
AA seq
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MSSRSDSKSASQIVFLTMKLKDKLHPQRNRTRAKPPDLDLSQNPSAILLDQERAVLSSLQ
YFKALVDRLDLDQPSGQKPGLDRSIVGGLLGGASTGILEAVQALVELEPDELDSKTVSAR
LARLYATVAQLIRWADRVMLQGVSHDDGGSSESVTTVIRGVLNSAKELVRLVAERREGSA
PLSPDQSQSRDVEDQETSTGIPHCPSGEGRGDGTETKGAGIRAPPKPPMPVLEPLPQATP
PTELAFSPPALPPKRRQTPPLPVSAHCRVAIVTPIIRQSEEDLQVEDDSCCKRLSSSSAD
SAANTSPSEDDPDYDFLHTDLSSSETLPPALPEKRRRSTTGVSGSQKAGTFGFNSTHVDT
SPAPSDDVTGPEAPMSSPLSPCKTPPPLPEKKRHIHQYLQFCSTSCTDPSAVSFYQKFKV
RQRDQDSAHQLDHLTTGSAPSGGPFPAPALPPKKKQQDTQSENEDSSVDHQQGSEFSQRS
REEDEEDELLLADPNEIRHRITLKSEEEEGPEVKAASPEILLVQATQPGSSEQNQYQEAF
LCSYRGFATPSDVISKLQRRYRTLREGGAADPTAAGNSIQLLVRVVAGLSSVELEADLLL
MLFDLVFCLLIGGELGMARLLHANILSKMEERWKLIGSPQSLRPLAAKGVAARPGTLLDF
RSQDLAEQLTLLDSDLFCKIQLPEVLLWSKEQNEERSPHLTEFTQHFNNVSFWVRSVVIL
QDKAQDREKHLLKFLKVMKHLRKLNNFNSYLSILSALDSAPLRRLDWQRSTAESLEDVSS
LIDSSSSFRAYRAALAEAEPPCIPYLGLILQDLTFVHLGNPDTLTTSQGSKVNFSKCWQQ
FNILDTLRSFQRERYSLARDDDIMSFFNDFSDHLAEEALWELSLRIRPRNAPRANQR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgctcagactcgaagtcagcttctcagatcgtcttcctcaccatgaagctg
aaggataagctccacccccagcggaaccggacccgggccaagcctccggacctggacctg
agtcagaacccgtcggccatcttgctggaccaggagcgcgctgtcctcagctctctgcag
tacttcaaggccctggtggacagactggacctggaccaaccctcgggacaaaaaccgggc
ctggaccggtccatagtgggcggcctgctgggcggagcctccaccggcatcctggaggct
gtccaggcgctggtggagctggagccggatgagctggacagtaagaccgtctccgcccgt
ctcgcccgtctctacgccaccgtcgctcagctgatccgctgggccgaccgggtgatgctg
cagggcgtctcccatgacgatggcgggtcttctgagagcgttaccacggtgatcaggggt
gtgctgaatagcgccaaggagctcgtccgattggttgcagagagacgggaaggctccgcc
cctttgtctcctgaccaatcacaatccagggacgttgaagaccaggagacgtccaccggg
atcccgcactgtccctcaggcgagggacgtggggatgggacggagacaaagggggcgggg
atacgtgccccgcccaaaccccccatgcccgtcctagagcccctcccacaggccacgccc
cctacggagcttgcgttcagccctcccgctctgcctcctaaaaggcgccagacgccgccg
ctccctgtctccgcccactgcagggttgccatagtaacaccaataatccggcagtctgag
gaagacctgcaggtggaggatgacagctgctgcaagcgactctcttcttcctctgcagac
tctgcagccaacacctcaccaagtgaggatgacccagattacgacttcctccacaccgac
ctgtcgtcctcggagacgctgccccctgccctgccggagaagagacgccgcagcaccaca
ggcgtcagcggctctcagaaggcgggcacctttggatttaactccacccatgtggacaca
agccccgcccccagtgatgatgtcaccggccctgaagcccccatgtcctcccccctgtcc
ccctgtaagacgcccccccctctccctgagaagaagcgacacatccatcagtacctgcag
ttctgctccacgtcctgcaccgacccgtctgcggtttccttctaccagaaatttaaagtc
cgacagagagatcaagactccgcccaccagctggatcacctgaccacaggctccgccccc
tctggaggtccatttcctgcccctgctttaccaccaaagaagaaacagcaggacacgcag
tctgagaacgaggacagctctgtggaccaccagcaggggtcagagttcagccagagaagc
agagaggaagatgaagaagacgagctcctattggctgacccgaacgagatccgtcacaga
atcactctgaagtctgaggaggaggaggggccagaggtgaaggctgcgtctcctgagatc
ctattggtccaagccacacagcccggcagcagcgaacagaaccagtaccaggaggccttc
ctctgctcctaccggggcttcgccacacccagtgatgtcatcagcaagctgcagcgcagg
tacagaaccctgagggaaggcggcgccgctgacccgacggccgccgggaactctatccag
ctgctggtcagggtggtggccgggctcagttctgtggagctggaagctgatttgctgctg
atgctgtttgacctggtgttctgccttctgattggtggagagctggggatggcccgcctc
ctgcacgccaacatcctgtccaagatggaggagaggtggaagctgattggctcccctcag
tcgctccgccccctcgcggccaaaggcgtagccgccagaccaggaactctgctggacttc
aggagtcaggacctggctgaacagctcaccctgctggactcggacctgttctgcaagatc
cagctcccagaggtgttgctttggtccaaggagcagaacgaggagaggagtcctcacctg
acagagttcactcagcacttcaacaacgtttccttctgggtgcgctccgtggtcatcctg
caggacaaagctcaggacagagagaaacacctgctgaagttcctgaaggtgatgaagcac
ctgaggaaactcaacaacttcaactcctacctgtccatcctgtccgccctggactccgcc
cccctgaggcggctggactggcagcggagcacggcagagagcttggaggacgtgtcctcg
ctcatcgacagctcgtcgtccttcagggcgtaccgcgcggcgctggcggaggcggagcct
ccctgcatcccttacctggggctgatcctgcaggacctgaccttcgtccacctggggaac
cccgacaccttgacgacgtcacaggggtcaaaggtcaacttctccaagtgctggcagcag
ttcaacatcctggacactctgaggagcttccagagggagcggtactctctggcgcgggat
gatgacatcatgtcgttctttaatgacttcagcgatcacctggcagaggaagctctgtgg
gaactctctctgaggatccgcccacggaacgctccacgagccaatcagagatga
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