Xiphophorus hellerii (green swordtail): 116730239
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Entry
116730239 CDS
T07363
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00514
Other types of O-glycan biosynthesis
xhe00515
Mannose type O-glycan biosynthesis
xhe01100
Metabolic pathways
Module
xhe_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
116730239 (pomt1)
00514 Other types of O-glycan biosynthesis
116730239 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116730239 (pomt1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
116730239 (pomt1)
Glycosyltransferases [BR:
xhe01003
]
O-Glycan biosynthesis
O-linked Man type
116730239 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
ECD
Motif
Other DBs
NCBI-GeneID:
116730239
NCBI-ProteinID:
XP_032435185
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All DBs
Position
12:273488..281800
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AA seq
719 aa
AA seq
DB search
MLHLPLVVTARLDLVLVLVTLLSLWTRLSGLGYPGAVVFDEVYYGQFLSLYMKRTFFIDD
SGPPLGHALLALGAYLGGFDGNFVGNRIGAAYPCSLSVWSLRLLPALGGALCVPLGYLLT
LELRCSHLSALGAALLLLLENSLIVQSRFMLLESLLIFFVLLAFFSYLRFHNAPGRCWSR
YGWLLLSGVSCAAAVGVKYTGLFSYLLLLGVASLNSWKLIGDRAQSHMSVCVQCGWKVLC
LLVVPVLLYVFWFYVHLSVLQRSGPHDQLMSSAFQASLQGGLSRVTRGQPLQVAFGSQVT
LRSSAPRPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYAFKDVNNWWIIKDPARQELVV
DSPPRPVRHGDIIQLVHGMTSRLLNSHDVAAPMSPHAQEVSGYIDFNVSMATQNLWRLEI
YNREAESEEWKTIVSEVRLVHLNTSAVLKLSGLPLPDWGFRQMEVVAEKLLKAHSGSLGW
TVEEHRYGTSQEQKEREAELHSPTHIDVDRKISFWSKFTELQWKMLTVKQEESEHKYSSA
PLEWITMETNIAYWLHPSSNAQIHLIGNPVSWGVANLSLLAYQLLAVLYLLRRRRGFKDL
PHDAWQRFASVGLLCGGGWAVNFLPFLLMERTLFLYHYLPALCYLYLLSPALLEHIHTHL
LSSGTSRHVLSVCTVAVLMSIFLSYWTFCPLTYGNPELTANQLQALKWRDSWDILYRRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatctccccctggtggtgacggcccggctggacctggttctggttctggtgacc
ctgctgtctctgtggacccggctgagcgggctgggctaccccggcgccgtggtgttcgat
gaggtctactacggccagttcctctctctctacatgaagagaacgttcttcatcgacgac
agcggcccaccgttaggccacgccctcctggctctgggagcttacctgggcggcttcgac
gggaactttgtcgggaaccgaattggagcagcgtatccctgcagcctcagtgtgtggagc
ctccggctgctgccggctctgggtggagctctctgcgtcccgctgggttacctgctgact
ctggagctcaggtgttctcacctgtcggccctgggagccgctctgctgctgctgctggag
aactctctgatcgtccaatcacgcttcatgttgctggagtcgttactcattttcttcgtc
ctgctggcgttcttctcatacctccgcttccacaacgcccccggcaggtgctggtccagg
tacggctggctcctcctctcaggtgtgtcgtgtgcggctgctgtcggggtgaagtacacg
ggcctgttctcctacctgctgctgctgggcgtggcctcgctgaacagctggaagctaatt
ggagaccgggcccagagtcatatgagtgtgtgtgttcagtgtggttggaaggttctgtgc
ctgttggtggttccggttctgctctacgtgttctggttctacgtccacctgagcgtcctc
cagcgcagcggaccacatgaccagctgatgagctccgcctttcaggccagcctgcagggc
ggtctctccagggtcacgcggggtcagcccctgcaggtggcgttcggtagtcaggtgacc
ttacgaagctccgccccccggcccgtcccctgctggctccactcgcacaaagccaactat
ccaatcaggtatgaaaatgggcggggcagctcccaccagcagcaggtgacctgctacgcc
ttcaaggacgtcaacaactggtggatcatcaaggacccggccagacaggagctggtggtg
gactctccgccccgacccgtgcgacacggtgacatcatccagctggttcatgggatgaca
tcacgcctcctcaacagccacgatgtggccgcacccatgagtccgcacgcgcaggaggtt
tccggatacatagacttcaacgtttccatggcaacccagaacctgtggaggctggagatc
tacaacagggaggcggagtcagaggagtggaagacgatcgtctctgaggtccgattggtc
cacctcaacacttcagctgtcctcaagctgagcggcctgcctctcccagactggggtttc
cgtcagatggaggtcgtggcggagaaactgctgaaggctcacagcggcagcctgggctgg
acggtggaggagcaccgatacggaaccagtcaggagcagaaggagcgggaggcggagctt
cactctccgacacacatcgacgtcgacagaaaaatctccttctggtccaaattcacggag
ctccagtggaagatgctgaccgtgaaacaggaagagtctgaacacaagtacagctccgcc
cctttagagtggatcaccatggaaaccaacatcgcctactggctgcacccctcgtccaat
gctcagatccatctgattggtaacccggtgtcatggggcgtggccaacctcagcctgctg
gcctatcagctgctggcggtgctgtacctgctgaggaggaggcggggcttcaaagaccta
cctcatgatgcgtggcagcggtttgcgtctgtgggcctgctctgcggcggcggctgggcg
gtgaacttcctgcccttcctgctgatggagcggactctcttcctgtaccactacctgccc
gccctctgctacctctacctgctgagccccgccctgctggagcacatacacactcacctg
ctcagcagcgggacgtcccgccacgtgctgagcgtctgcacggtggctgtcctgatgtcc
atcttcctgtcctactggaccttctgtcctctgacctacgggaaccccgagctgacagcc
aatcagctgcaggcgctgaagtggagagacagctgggacatcctgtaccgccgccgctga
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