Xiphophorus hellerii (green swordtail): 116730242
Help
Entry
116730242 CDS
T07363
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116730242 (ttf1)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116730242 (ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116730242
NCBI-ProteinID:
XP_032435186
LinkDB
All DBs
Position
12:complement(126160..130574)
Genome browser
AA seq
586 aa
AA seq
DB search
MAAPGRSRRRKSREEEELSLHHVDEVTEGQRRKRRRSAGQLEHLNPPEEEEQLQTKAKKK
RVTGEEEEIVLPPTAELMQEEDRKTKKKKRLGEEPPAAVDLNTQKKKKKKTEGREEEIIC
LPPDGPTRDHKKKKKKMMASQQEDEDHMCIAIATISPGQEEALEAEPTNLGNKKEKKKKS
SSGTGSTQEDSKKKNAKPQKKKTQRGDLSSSPEEGVDWALVQELQDFLPHIRRKCMNQIK
KILRSDLHRFRKFRQQGVLARSGRFSVQENQQIKENISDFLVLTGIGSVEKLLFPQRFVE
EQAAIRKLKKQHGFMERIADGIPRPCHQVYLRALKMFDEKNHMGRFSEEELAALIRFHNL
YGNNWKLISQKMERSVYSLQKRFAALGVGHGVWTAEEERRLKQAVRERLENRAGPDGSGL
SRNQLSQSLPWREISQEVETRSWIQCRGKWFFILDHRMTFYGNVFNRGAEGYEAKIRLIS
TLYDTSVDDIADVNWEEVAAAVGDVTPWSVQRMFNRLKQHKVPHFHSLSFGEIIDFLYHR
VVPVLQKRLRSLDRRAELQERCSQDRYQLSDIFNSDLEDDGKMDDI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccaggtcgatcccggaggaggaaaagcagggaggaggaggagctgagcctt
catcatgtggatgaagtgactgaaggtcagaggaggaagaggagaaggtcagcaggtcag
ctggaacatctcaaccctcctgaggaagaggagcagctccagacgaaggcaaagaagaag
agagtcacaggtgaggaagaggagatcgttcttcctcccactgctgaactgatgcaggaa
gaagacaggaagacgaagaagaagaagagacttggggaggaacctcctgctgctgttgac
ctcaacactcagaagaagaagaagaagaagacagaagggagagaagaagaaatcatctgc
cttcctcctgatggaccaacacgtgaccacaagaagaagaaaaagaagatgatggcatca
cagcaggaagatgaagaccacatgtgcatcgccatagcaacaatctctccaggccaagag
gaagctctagaggctgagccaacgaacctcggcaacaagaaggagaagaagaagaagagc
agcagcgggacgggctcaactcaggaagactcgaagaagaagaacgcaaaaccacagaag
aagaaaacgcagcgaggagatctgagcagcagcccagaagaaggggtggactgggccctg
gtccaggagctccaggactttctgccccacatcaggaggaaatgcatgaaccagatcaag
aagattttgagaagtgacctccatcgcttcaggaagttcagacagcaaggtgttctggcc
cgttcgggtcggttctctgtgcaggagaaccagcagatcaaggagaacatttcggacttc
ctggttctgaccgggatcggttctgtggagaagcttctgttccctcagaggttcgtggag
gagcaggcggccatcaggaagctgaagaagcagcacggcttcatggagcggatcgcggac
gggatcccccggccgtgtcaccaggtctaccttcgggccttgaagatgtttgatgagaag
aaccacatgggcaggttctccgaggaggagctggcggcgctgatccggtttcataatctc
tatggcaacaactggaagctgatttcacagaagatggaacgcagcgtctactcgctgcaa
aaacgcttcgccgcactcggtgtgggtcacggcgtctggactgccgaggaggaacggcgg
ctgaagcaggcggtcagggagcggctggagaaccgggccggtcccgacggatccggtttg
agccgaaaccagctgagccaaagtcttccatggagggagatcagccaggaggtcgagacc
cggtcctggatccagtgccgcggcaagtggttcttcatcctggatcatcgcatgacgttt
tacggaaacgtcttcaacagaggagctgagggttacgaagccaaaatccgcctcatcagc
acgttgtacgacacgtcggtggacgacatcgctgatgtcaactgggaggaggtcgctgca
gctgtgggtgatgtgaccccatggagcgtccagcgaatgttcaacagacttaaacaacat
aaagttccacatttccactcgttgtcatttggagagatcatcgacttcctgtaccaccga
gtggttcctgtcctgcagaagcggctgaggtccttggacaggagggcggagctacaggag
cgctgcagccaggacaggtaccagctgtcggacatctttaactcggacctggaagacgac
ggcaagatggacgacatctga
DBGET
integrated database retrieval system
