Xiphophorus hellerii (green swordtail): 116730262
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Entry
116730262 CDS
T07363
Symbol
smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116730262 (smarcad1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116730262 (smarcad1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HHH_3
UBA_N4BP1_C
HHH_5
Motif
Other DBs
NCBI-GeneID:
116730262
NCBI-ProteinID:
XP_032435230
LinkDB
All DBs
Position
12:complement(13600793..13611744)
Genome browser
AA seq
1096 aa
AA seq
DB search
MSMFNLDRFRFEKKGANKDPGCVSKSPDSEKENEPAQMKSFKATPKSHARGVIFEEVISI
DLEEDDVMAEPNTKIQITTKNKDVSDSRSSVQKLPKDLAPLNTDDEDEEMDEKISKLLEL
FPQLSRTEVIEVSGSTSTLEGAIAVCLLKFGDEEAPNDGKKRKQGGSSCSQDSGDIQPSK
RRKPSLVSDEEGEGDEPSWEKQEAMVRKLQKRFPDQDKEELRMVLQEHDWDVEEALQVLQ
MFSESDNSSTSLVIPKEQKSKGKAESTRNYSEDSSETNGMSTDDTENSSTDSDNSEKTKP
KRRQMSIRDYKDSKGQKSTERKREAHHGDLEDHRDVDKADGNSTDNTKDSEDESELEDTK
VSKLSTSIHTVHSRIAFLSCSRMQTSTSSTSKPSPSSSASQVLSKFSSDTGLAKKQAAER
KKKARATEEQVSSDDEEDVVTSEFEDSDDELESINVKKDVKDEILAFFQDASIDELSLIS
GCSVKKAQRIVELRPFDSWESLWDVFHKGNGLSDDLMHGCKVVLKERKVILGLMSKCQTI
SIKMVQRVTEVMESGTGSTKQPSLLNSQLQLKPYQLIGLKWLMLLNEHKLSGILADEMGL
GKTIQAIAFLAQLYENGIEGPHLITVPSSTLDNWVRELRLWCPALEVLIYYGSVEERRYL
KHDILNGEVHFNVIVTTYNLAIGNDSDRSLFRKLPIKYAIFDEGHMLKNMNTLRYRHLMA
INAEHRLLLTGTPLQNNLLELMSLLNFIMPTMFSSSTMQLSKMFSMKSHEEQSRFERDRI
TRAKLIMKPFILRRVKNEVLKQLPAKEEKIEFCSMSEKQQVLYEALLKKLKSTTIGEKRE
LCNVMMQLRKMANHPLLHRQYYTTEKLQAMSQLMLKEPTHHDASAALIQEDMEVMSDFEL
HRLCQQYFSIGSFQLDTSLLLDSGKFLHLKELLTSLKSQGDRVVLFSQFTMMLDIVEVLL
KHLQHRYVRLDGSTPIADRIVLIDEYNTDPDIFVFLLSTRAGGLGINLTSANVVILHDID
YNPYNDKQAEDRCHRVGQTRTVQVIKLISKDSIEDCILHLGQKKLKLEQDMTAADQDDEG
SIPDDMASLLKASLGL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttcaatctagaccgctttcgattcgagaagaagggagcaaacaaagatcca
ggttgcgtgtccaaaagtccggattctgaaaaggagaacgaaccagctcaaatgaaatca
tttaaagccacgccaaagtcccacgcacgaggtgtgatttttgaagaagtcatttccata
gatttggaggaagatgatgtcatggccgagccaaacacaaaaatacaaataaccacaaag
aacaaagatgtttctgattctaggagctcagttcagaagctaccaaaagatttagcacca
ctaaatacagatgatgaggatgaggagatggatgagaagataagcaaactattggaattg
tttcctcaattatcaagaactgaagtgatagaggtctctgggagtacgagcacgttggag
ggcgctatagctgtctgccttttaaaatttggggatgaagaagctccaaatgatggcaag
aagagaaagcagggtggatccagctgttctcaggacagtggtgatattcaacccagtaaa
agacggaaaccgtctttggtctctgatgaagagggcgaaggcgacgaaccaagctgggaa
aagcaggaggccatggtgagaaaactccagaaacggtttccggaccaggacaaggaggag
ttgaggatggtgcttcaggagcacgactgggatgtggaagaagctctgcaggttcttcag
atgttctcagaatcagataatagtagcaccagcctggttattccaaaagagcagaaatca
aagggcaaagctgaatcaaccaggaactactcagaggacagcagtgaaacaaatgggatg
agtaccgatgacacagaaaacagttctactgactctgataattcagaaaaaacaaaacca
aaaaggagacaaatgtcaatcagagattacaaagactcaaagggccagaagtctactgaa
agaaaaagagaagcacatcatggggatcttgaagaccacagagacgttgataaagcagat
gggaacagtacagataatacaaaggacagtgaagacgagtcggagctggaggacacaaaa
gtctccaaacttagtactagcattcatactgttcactcacggattgcgtttttatcatgc
tctcgtatgcaaacctctacctcatccacctcgaagccttcgccttcctcctcagcctcc
caggttttgtccaagttttctagcgacacaggactcgcaaagaagcaggcggcggagaga
aagaagaaggcacgagctactgaagaacaagtcagttctgatgatgaagaggacgtagta
acaagcgagtttgaggactctgacgacgagctggagagcatcaatgtcaagaaggatgtg
aaagatgaaatacttgcgtttttccaggatgcatcaatagacgaactgtcgctgatttct
ggctgttctgttaaaaaggcccagaggatcgtggaactgagaccctttgatagctgggaa
tccctgtgggatgtcttccacaagggaaacggactctcagacgatttgatgcatggctgc
aaggtcgtcctcaaagagaggaaggttatacttggactcatgtctaaatgtcaaacaatt
tctataaaaatggtgcaacgggtcacagaggtgatggagagtgggactggctccacaaaa
cagcccagtttacttaacagccagttgcagctcaaaccgtatcagctgattggcctaaag
tggcttatgcttctgaatgaacacaaactgagtggcatccttgctgatgaaatgggtttg
gggaaaaccatccaggctatagcatttcttgctcagctgtatgagaacggaatagaaggt
cctcatctcatcactgtgccttcctccacactggataactgggttagagagctgaggctg
tggtgccctgctcttgaagttcttatttattatggatctgtggaagagcgacgctacctc
aaacatgacatcctcaatggggaagtccattttaacgtgattgtgacgacgtataacttg
gcaatagggaacgacagcgatcgatctctttttcgtaagttgcctatcaaatatgccatc
tttgatgaaggccacatgttaaagaacatgaacactctgcgctaccgccacctaatggcc
attaatgctgagcatcgcctcctgctgacaggaactcctttacaaaacaacctgttagag
ctgatgtcgctgttgaatttcataatgcctaccatgttctccagctccacaatgcagctc
tccaagatgttttctatgaaatctcacgaggaacaaagtcgatttgagagggatcgaatt
actcgagccaaactcatcatgaaaccctttatcttgcgacgagtcaaaaatgaggttctc
aagcagctcccggccaaagaagaaaagatcgagttctgctccatgagtgagaaacagcag
gttctctacgaagcgctgctaaagaaactaaagagtaccactattggagagaagcgtgag
ctgtgcaatgtgatgatgcaactgaggaagatggccaaccatcctcttcttcacagacag
tactacaccacagaaaagcttcaggctatgagccaacttatgctaaaggagccaacccac
cacgatgccagtgctgctctgattcaggaagacatggaggtgatgtcagattttgagctc
catcgtctgtgtcagcagtatttctctatcggctccttccagctcgacacaagtctcctt
ctcgactctgggaaattcctccacctaaaagagctgctgacctctctaaaaagccaggga
gacagagtggtgctattcagtcagtttaccatgatgctggacattgtggaagttctcctg
aagcatctacagcatcgttacgtcagactggatggatccactcctatcgctgacaggatt
gttttgattgatgagtacaacacagacccagacatattcgtgttcctgttatcgacacgt
gctggagggctcggcatcaacctcacctctgctaacgttgtcatcctgcacgatatcgac
tacaatccctacaacgacaaacaggcagaggatagatgtcaccgcgtgggccagaccagg
actgtacaggtgataaagctgatcagtaaggacagcatagaggactgcatcctgcatctc
ggtcagaagaagctaaagctggaacaggacatgactgctgctgaccaagatgatgaagga
agcattcctgacgatatggcctctttactcaaagcctctctgggactgtga
DBGET
integrated database retrieval system
