Xiphophorus hellerii (green swordtail): 116730293
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Entry
116730293 CDS
T07363
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
xhe04148
Efferocytosis
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116730293 (vps33a)
04148 Efferocytosis
116730293 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116730293 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116730293 (vps33a)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116730293 (vps33a)
Hops complex
116730293 (vps33a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
116730293
NCBI-ProteinID:
XP_032435270
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Position
12:23064482..23070298
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AA seq
600 aa
AA seq
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MAAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKSGRLPSADVKNIIFFIRPRLELMDIIADNIFSEDKLHPARDFHILFVPRRSML
CEQRLKEQGVLGSFVNIDEYILDLIPFDGDLLSMEYESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIFGKGDCARHVANMMLRMKREFAGTQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYGINNGYVKLPPEKFAQKKQGEGSKDLPTEAKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSVAEL
IKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVSMQSVCNNGL
KPKVLDYYKREILQTYGYEHILTLNNLEKAGLLKPQTGSRNNYPTIRKTLKLWMEDANEQ
NPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPSGLHKKRQQG
ENRTTLVFFLGGVTYAEIAALRFLSQMEDSGMEYIIATTKLINGTTWIKSLMDRPESQIP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccatctttcatacggcagagttaatttaaacattttgagagaagcggcacga
aaagagcttcgagagtttttggacaaatgtgcaggaagtaaggccatagtttgggatgag
tatctgacagggccttttggtctgatagctcagtactctcttctgaaggaacatgaagtg
gaaaagatgtttaccctgaagagcggcagactcccctctgctgacgtcaaaaacatcatc
ttcttcatccgtcccaggctggagcttatggacatcatagctgacaatatatttagtgaa
gataagctgcatccggcacgagacttccacatcttgttcgtgccccggcggagcatgctg
tgtgaacagcggctgaaggagcagggagtgctgggctcctttgtcaacatcgatgagtat
atcctggacctgattccttttgatggtgacctgctttccatggagtatgaaagcgctttt
agggagtgctatctggaaaatgaccagacgagtttgtaccacacagccaaaggcctcatg
accttacaggcgctctatggtaccatccctcagatatttgggaaaggagactgtgcacgt
catgttgccaacatgatgttgcggatgaagagggagtttgctggcactcagaatcagatt
ctaccggtgtttgatactcttcttctcctggaccgtaacgttgacctactgacccccctc
gctacacagctcacctacgagggacttattgatgagatctatggaataaataatggatat
gtcaagctccctcctgagaagtttgcacagaagaagcaaggtgaaggtagcaaagatttg
cctacagaggccaagaagttgcagctgaactccgccgaggaactgtacgcggaaatccgc
gacaaaaacttcaacgctgttggagcagcgctcagcaaaaaggccaaaattatatctgca
gccttcgaggagcgccataatgctaaaacagtgggcgagataaagcagtttgtgtctcag
ctgcctcacatgcaggcagctcgaagctcgctggccaaccacacgtctgttgctgagctg
attaaagatataaccacatctgaggccttttttgataacctaactgtggagcaggagttt
atgacgggcgtcgacacggacaaggtgaacacatacatagaagactgcatcgcccagaag
gatccactaatcaagattctgcgcctggtgtccatgcagtcagtgtgcaacaatggcctc
aagccgaaggtgctggactactacaagagggagatacttcagacttatggctatgaacac
atactaacgctgaacaacctagagaaggcgggtcttctgaagccacagacaggctccaga
aataactaccccactattagaaaaacccttaagctgtggatggaggacgccaacgagcag
aacccaaacgacatctcgtacgtgtacagcggctacgctccgcttagcatccggctcact
caggtgctggcgaggccgggctggcgcagcatcgaagaggtgctaaagatgctcccgggc
ccacacttcgaggagagacaacagcttccatctggacttcataagaaacgccaacaaggg
gaaaaccgaaccacgctggttttcttcctcggcggggtgacgtacgcagaaatagccgct
ctgcgtttcctctctcagatggaagacagcggcatggagtacatcatagccactacaaaa
ctcatcaacggcaccacttggatcaaatccctcatggacagacctgaatctcagattccc
tga
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