Xiphophorus hellerii (green swordtail): 116730335
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Entry
116730335 CDS
T07363
Symbol
znrf3
Name
(RefSeq) E3 ubiquitin-protein ligase ZNRF3 isoform X1
KO
K16273
E3 ubiquitin-protein ligase ZNRF3 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116730335 (znrf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116730335 (znrf3)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116730335 (znrf3)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116730335 (znrf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116730335
NCBI-ProteinID:
XP_032435357
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All DBs
Position
12:9723400..9801545
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AA seq
891 aa
AA seq
DB search
MMIFPRRGSARVPDSLVPVIWLLAASLGAVLAKDTAFVEVVLFESSPNGDYTTYTTGLQG
RFSEAGATISAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPSCLTVLGKAK
RAVQRGATAVIFDVSENPDAIDQLNQVAEDPLKRPVVYVKGNDAVKLMNIVNKQKVARAR
IQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLIKIKLKQRRSQSSMNRMAIQALEKMET
RKFKAKGKGLRESSCGASDSLSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWL
LQHHTCPHCRHNIIEQKKGNPGPACMDPGSSLHGRQRVVLPVHYPGRVHRAGQVTAYPTR
TSMDPHGNPITVLTVDQHSDPQGLYPPQSTSAFLRSYHPALHLEHSLNPHHCRLEHRGPP
AYSAQQHHTAFKRPKFHGRSFSRAACFSQYETMYQHYYFQGLSFPQQPEGAQGPLTGQLG
GGAGAHKGHHSRAFQQGLLYPTVVHMAPPSSSRVGDSGSTSGLSCYHGHRSVCSGYLADC
PGSDSSSSSSGQCHCSSSDSMLDCTEVSNQGVYGSCSTFRSSLSSDYDPYVYRSKSPCRS
STGEPGASGCTTAPTEDSSIPAPLGHDCLQLPAGASGYNSGDHHSNCSLEPNYSSRSSLE
PRENINTSTTSAGAPEAAAADRGTGAQEESGELGAAACSCCFEVIPPNAESKGQDLDQAG
PVASGHCQRGVDFQSSSPKNYFTPEHLYPPSEQVSYEGLPCCFYKEMKVHRAAAGHYTED
YAVNVQYAHSDSDACLGQGCCELNHRIPIIPEDTDCEMGLGAETQSSFLPVSITMEAELQ
TGEHHEHKERYFPSGQLGQAEEMRALFHPQLSASLTVQGTSTSTNEGDLGI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgatgattttcccaaggagaggctcggctcgggtgcccgactcgctggtcccggtgatc
tggctgctggccgcttctctgggcgccgttctcgccaaggatacagcctttgtggaagtg
gtgctgttcgagtccagtcccaatggggattatactacctacacgactggcttgcaggga
cggttctccgaagctggagccactatcagcgcggagggggagatcgttcaaatgcatcct
ttgggactatgcaacaacaatgacgaggaggacctttatgagtacggctgggttggcgtt
gtgaagctggagcaaccagagctggaccccagctgtctcacggtcctgggaaaggcgaag
agagcagtgcagcgcggagccacggccgtcatctttgatgtatccgagaatccggatgcc
attgatcagctcaaccaggttgcagaggatcctctgaaacggccggtggtttacgtgaag
ggcaacgacgccgtcaagctcatgaacatcgtcaacaagcagaaggtggcccgagctcgg
atccagcacaggccgccgaggcagcctacggaatatttcgacatgggcatctttcttgct
ttcttcgtcgtggtgtcgctggtttgtctcatcctcctcatcaagatcaaactaaagcaa
aggcgaagtcagagctccatgaacagaatggccatccaggcgctggaaaagatggagaca
cgcaagttcaaggcgaaagggaagggcctgcgcgaaagcagctgtggagcctctgattcg
ctgagcagcagctccacctctgactgcgccatttgtctggagaaatacatcgatggggag
gagttgcgggtgatcccttgtgctcacaggtttcataagaaatgcgttgacccctggctg
cttcagcatcacacctgtccccactgtagacacaacattatcgaacaaaagaagggaaac
ccaggaccagcatgcatggaccctggcagctcgctccacggcaggcagcgggtggtgctg
ccggtccattatcctggcagggtgcaccgtgccggccaggtgacggcatacccgaccaga
accagcatggacccccatggcaaccctatcaccgttctcacggtggaccagcactcggac
cctcaaggtctgtacccaccccagtcgacatcggctttcctccggagttaccaccccgcc
ctccatctggaacattcactcaacccccaccactgcaggttggagcaccgcggacccccc
gcctactccgcacagcagcatcataccgcttttaaacgacccaagttccacggtcgcagc
ttttcccgagcagcttgtttttcccagtatgaaactatgtatcaacactactacttccag
ggcttgtctttccctcagcagccagagggggcgcaagggcctttgactgggcagctggga
ggaggggcaggagcccacaagggccaccacagcagagccttccagcaaggactcctgtat
cccacagtggtacacatggcgcctccttcttcttcacgggtaggggatagtggcagcact
tctggcctgagctgttaccatggccaccgctctgtgtgcagtggttacctcgccgactgt
ccgggtagtgacagcagcagcagcagctctggccagtgccactgctcctctagcgactcc
atgttggactgtaccgaggtcagcaaccagggggtttacggaagctgctccactttccgc
agctcgctgagcagcgactacgacccttatgtctacaggagcaagagtccctgtaggagc
tccacgggggaaccgggtgcttcgggttgcaccaccgcccccactgaggactcatcaatc
cctgctccactgggacatgactgccttcagcttccggctggtgcatcgggatacaactcg
ggggaccatcactccaactgcagtttggagcccaactacagcagtcgttcgtcactggaa
cccagggagaacattaacacgagcactacctcagctggggccccagaggccgctgcagcc
gacagggggacgggggctcaggaggagtcgggagaacttggggctgcagcctgtagctgc
tgttttgaggtgattcctcccaatgcagaaagcaaagggcaggacttggaccaagcaggg
cctgtagcctcgggacattgtcaacggggtgtagactttcagagttcctcccctaagaac
tacttcacacccgaacacttgtatcctccttctgagcaggtgagctatgaagggctgccc
tgctgcttctacaaagagatgaaggtgcacagggccgcagcgggacattacacggaggac
tacgccgttaatgtgcagtacgcacactcggactcggatgcctgcttaggacagggctgc
tgcgaactcaaccacaggatacccataattcccgaggacacagactgtgaaatgggtttg
ggggcagagacccagagcagctttttacctgtgagcataacaatggaggcagagctgcag
acaggggagcaccatgagcataaggagaggtacttcccctcaggacagctgggtcaggct
gaggagatgagggctttattccaccctcagctctctgcaagcctgaccgtacagggaact
agtacttcaacaaatgagggagatctgggaatatga
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