Xiphophorus hellerii (green swordtail): 116730361
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Entry
116730361 CDS
T07363
Name
(RefSeq) protein turtle homolog A-like isoform X1
KO
K22655
immunoglobulin superfamily member 9
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116730361
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
IGSF9
116730361
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
116730361
NCBI-ProteinID:
XP_032435405
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Position
12:23140949..23171658
Genome browser
AA seq
1989 aa
AA seq
DB search
MGLERRWLQAVTTAVAICLLSVSQGLASLVHAREGDSAELDCSLTPSSKEATTPNLFPLH
VVEWVRLGYNVPVLIKFGVYAPRVHPNYKGRVSLTHGASLLVERLTLEDEGWFECRILLL
DSKTDNFQNGTWTFLSITAPPVFIKTPPTFVEVLLGDSLTLSCGAHGNPRPTVVWHKDES
PIEKHEKIKVLNGTLSLATVTRNVSGVYKCHVSNTEGNLTHYTELQVQGPPIIIISPEDT
TLNMSQDAVLQCQADAYPSNLTYEWLKQGQNVYHIESLRSRVKILVDGTLLIPNLIPEDA
GNYTCIPTNGILTPPSASAHLKVKHPARVGRMLRETYLPAGMEGVIFCPVQADPPVLYVN
WTKDGNELNLDNFPGWMVNSEGSVFIATANDNAVGMYTCTPYNSYGTMGQSEPTKVILQD
PPSFRVPPLPEYLQEVGRELIIPCEASGDPAPNVTWSKIGPSPRSPYTVLSNGSLLLQPL
SKDHHGGWECLATNRVATVSAGTVVFALGTSPHAVFSVTVTTEMNQANVSWVPGFDGGFT
QKFTVWVKQTSRGKHEWASLPVPTSKNYLLVTGLLAGTGYQFSVLPQNKLGSGPFSEIVS
IRTKAVPTELPKTSTGVPALEPPTLLSANRTGRGILLQWQPPEAPLSPLTGFVLQARRDQ
GQWIIIDSNIYANRSEVLVQGLLRDSVYDLRLMSRSNKVLSEPSESVSVSTTGMEIYPLR
PSFLEVIPEPLMAGVIGGACFLLLAIILSLVTACYMSNRRRQRRRKRRQDLPAAFQKSPS
QDTRSPSRSPDSVLKFKLCPPLPFFPNSSLSQSDRSSFDKGSRGEYHDQRKQLLSNSSPP
PHYTLFESHLGSQAPSPTALESISRGPDGRFIVQPLPEVSSPSTKNIKKDVLQVNGSVHG
SGSNRTSIRDSPKSSILSSEKDERKDSPLTVDVPELSRPPASPGRVRAMARNFSRHGCFY
SDDEQGSETLLERASFYSDSSERKPSDSLRRCRMRGNTEDLFSSLGRRTMLLDRDRLHHG
GYRPMESHLTDNSTLVSQLESELEMDSVNKCVQLAKEREEIERELKNFAMDQRHCSRVRD
APSPCSTTERPQRDETESVEEPVWKPQEVTIRPKYRPTGVTSRVSDYRRACYFGNTSSPL
DRLPTSRIQWDVSPVTSVTSLIPVQTPCKTTSLISSREATEVSLALDSSSSPVTQNTSLP
MLSRDVTLDKATSSNLQKNKEACTKSGTEQNIVEETQELGVVSKSTSPLDSQLRDLPNTV
RPETSDSVQHNQTERTADIGHNNTRDPSPGSSSTLLYNHHKVGAKSKDRETQDHDDQHVS
GFYSDLEKESVRTLSRRSDKCLFPDSPSPIPTLTLVEEVESDQSQFSVPRMSDSFKAKPA
APSPKTSPHQTSAILEYLSLPGFIEMSVDEPVEEGQVTDATTKQTPKEESVVAKPDVVPR
NWEVHVQENPQTLSSQKQGDPLGSADSSYDAYKTQGNRRSPQVTARVRFPDDPRPSSSGP
EKTSKELYNEKTRIRAGNIYTVRPESRLGSRSAHTLFNAAKGMADIVSKHSQSCADSDEF
LSEQPQRQSSQGSRTNKIVSRITQAPVPFLKKSLSLGPCRTLSGVAQPRPYLKKSISLGS
HRWEHFESPRPYISEKCYWDEFPNPDVRVKSYSLGRTPPSLPRPGPCWKEYIPFRRPSMG
SLERPHHTQRSLASPSYLTPLYPPRQTSMSPMLEPSDPRRQAAIFPESSRWSPSFQDTLR
SVQHQFIPMPTSNSLPYYQHWPDPRGEGLRHSDSRRGPPRSYLPRGISWPSPYYSAFPPR
EGDGYRHPDRMMGRSGDAEFRDGGRASYASQSSGRGSAGLFRQSLSVTPTLLSSPETTEE
HERHRAEMELAERRVKRRNTSVDESYEWDSADACLDSEVLEATRSGQCRAGFQRGRRETG
SDQTGGLRDQRQTGPPPPVIPPRSLSEARFNALRLEYQEYRRAQGSACTREPCFHPSHDS
DSDSSSALL
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgggactggagagacggtggcttcaggctgtcaccactgctgtagccatctgtctgcta
agtgtgtctcagggtttggcatcgctggtccatgccagagagggtgactctgcagaactg
gactgcagtctgactccatcgtccaaagaagccaccaccccgaacctctttcccttacac
gttgtggagtgggtgcgccttggctacaatgtacctgttctcattaaattcggagtgtac
gctcctcgtgttcatcctaactacaaagggcgtgtgtctctgacccatggcgcctctctg
ctggtagaacggctgaccctggaggacgagggctggttcgagtgtcgtatccttctcctg
gacagcaaaaccgacaactttcaaaatggcacatggaccttcctctccatcacagctcct
cctgtgttcatcaagacgccgccaacttttgtggaggttctgctcggagactcgttgact
cttagctgcggagcccacggcaaccctcgaccaacggttgtctggcacaaagatgagagt
ccgatagagaaacacgaaaaaattaaagtgctcaacggtactctgtctcttgcgactgtc
acaagaaatgtttctggagtctataaatgccacgtgtcgaacacagaggggaatctgacc
cattatacggagctgcaggttcaaggtccaccgatcatcatcatctcccctgaggacacg
actctcaatatgtcccaggatgctgttctgcagtgccaggcagatgcttacccttcaaac
ctgacctacgagtggctgaaacaaggacagaacgtttatcacatcgagtccctcaggtcc
agagtgaagattctggtggatggaactcttctgattcctaatctcatcccagaagatgct
ggaaactacacttgtatccccactaatggaatactgactccaccctcggcttctgcccat
ctgaaagtgaaacacccggcacgtgttggaagaatgctgcgtgaaacttatttgccagca
ggaatggagggggtgatcttctgccctgtgcaggctgacccgcctgtgctgtatgtcaac
tggaccaaagacggaaatgagctgaatcttgacaatttcccaggttggatggtgaactca
gagggctcagtgtttatagcaacagccaatgacaatgctgtaggcatgtacacctgcacc
ccttacaacagctacggcacaatgggccagtctgagcccaccaaagttattttgcaggac
ccaccatcatttcgagttccccccctgccagagtatctccaggaggtcggccgagagttg
atcatcccctgtgaagccagtggagatcctgctccaaatgtaacctggagcaagattggc
cctagtcctcgctcaccgtacacggtgctatctaatggatccctcttgctgcagcccctg
agcaaagaccaccatggtggctgggagtgtttggccaccaatcgtgtggcgactgtcagt
gcaggcactgtagtctttgcacttggcaccagtcctcatgctgtgttctcggtgaccgtt
accacggagatgaaccaggccaacgtgtcctgggtcccaggttttgatggtggatttacc
cagaaatttactgtgtgggtcaagcaaacatccagggggaagcatgaatgggcatctttg
cctgtgccaacatccaaaaactacctgcttgtgactgggttactcgcaggcactggctat
cagttcagcgtcctacctcagaataaactcggctcaggaccttttagtgaaattgtatca
atacggacaaaagctgtgccaacagagctacctaaaacctccacgggtgtcccagccctt
gaacctcccacgttgctctcagctaaccggacggggcgaggcattctcctgcagtggcag
cctcccgaggctcctctctccccactgactggttttgtcctccaggcccgcagagatcag
ggccagtggatcatcattgacagcaatatctatgccaatcggagcgaagtacttgtgcaa
ggactgctaagggactccgtgtatgatttgaggctgatgtcacgcagcaacaaagtcctg
agtgaaccgagcgagtccgtgagtgtttccacaactggaatggaaatttacccacttcgt
cctagtttcttagaagtcattcctgaaccactgatggctggtgtgatagggggagcgtgc
tttctgcttcttgcaatcatcctctctttggtgacggcatgctacatgagcaacaggaga
cggcagagacgcagaaagaggagacaagatctgccagctgcctttcagaagagcccatct
caagacacacgatcaccttcacgcagcccggacagtgtcctcaagtttaaactatgtcca
cctctgcccttctttcccaactcctcgttatcacaatctgatcgctcttcgtttgacaaa
ggtagccgtggggaataccacgatcagcggaaacagcttttgtccaactcctctcctccg
cctcattacaccctcttcgagagtcatctaggttctcaggcgccttcgccaactgctctg
gagtccatttcccgaggtccagacggacgcttcattgttcagccactgccagaagtttca
agtccttccactaaaaatataaagaaggatgttctgcaagttaatggaagcgttcacggg
tcagggagcaacaggacatcaatcagggactctccaaaatcaagcattttgagctcagag
aaggacgagaggaaggactctcctcttacggtggatgtcccagagttaagcagacctcct
gcatcgcctggcagagtacgagccatggcaagaaatttctcccgacatggctgcttttac
tccgatgacgaacaaggctcagaaactcttttggaaagagccagtttctactctgatagc
agtgaaagaaagcccagcgattccctacgtaggtgtcgcatgcggggcaacactgaagac
ctgttctccagtttgggaaggagaacaatgttgctggatagagacagactccaccatgga
ggctaccgaccaatggaaagccacctgactgacaacagcaccctggtctcccagctagag
agtgagctggagatggacagcgttaacaagtgtgtccaattggcaaaggagagggaagag
attgagagggagctgaagaatttcgcaatggatcaaagacattgcagtcgagtgagggac
gcaccctctccatgtagtacaacagaacgtcctcaaagggatgagaccgaatcagtggaa
gaacctgtgtggaaacctcaagaagttacaatcagaccgaagtacaggcccactggtgtg
acaagtcgggtttctgactataggagagcgtgctactttggcaacactagcagtccgctg
gacaggctccccacatctcgcatacaatgggacgttagccctgtcacatctgtcactagc
ctcatccctgttcagactccttgtaagactacgtcgcttatctcatctagagaagccacg
gaggtgtctcttgctttagattcatcaagctcgccggtcacccagaatacgtcactaccc
atgctctcccgtgatgtcacactagataaagctacatcatcaaatcttcagaaaaacaaa
gaggcttgtaccaagtctggcactgagcagaacatagtagaggagacacaggagttaggt
gttgtttctaaatcaacgagtccattagattctcaactacgggatttgcccaacacagtg
agacctgaaacttcagattctgtacagcataaccagactgaaagaactgcagatataggt
cacaacaatacaagggaccccagtcctggtagttcttcaaccttgctgtacaatcatcat
aaagtaggagctaagtccaaagacagagagactcaggaccacgatgaccagcacgtttca
gggttttactccgatttagagaaggaaagtgtccgaacactctccaggagaagcgacaag
tgtctcttccctgacagtcctagtcccataccaaccttaactcttgttgaagaggtcgag
agtgaccagtctcagttttcagtccccagaatgtccgactctttcaaggccaagcctgca
gcaccatcccctaagacgtccccacaccagacaagtgcaatccttgaatacctgagtctt
ccaggtttcattgaaatgagcgtggatgagcctgtggaagagggtcaggtgaccgatgcc
accacaaaacaaacacccaaggaggaatctgttgtggcaaaacccgatgtagtccctaga
aactgggaggttcatgttcaagaaaacccacaaactctgtcaagtcagaaacaaggtgat
cctctgggttctgcagactctagctacgatgcttataaaacacaaggaaatagacgttct
cctcaagtgacagccagagtgagatttcctgatgacccaaggccgtcttcatcgggccca
gaaaaaacaagcaaggagctctataatgagaaaacaagaattcgagcaggaaatatttac
accgtcagacctgaatccagacttgggtccaggtcggctcatacgttgttcaatgcagct
aaaggcatggcagacattgtgtcaaagcattctcagagttgtgcagacagtgatgagttt
ttgtcagagcagccccaaagacaatcttctcagggaagcaggactaataaaatagtgtct
cgaataactcaagcccctgtgccatttctgaagaaatccttaagccttggtccctgtagg
actctctctggtgtggctcagcctcgcccttaccttaagaaatccattagcttaggctca
cacaggtgggagcactttgaaagcccaagaccatatatttctgagaaatgttactgggac
gagttcccaaacccggatgtgagggtgaagtcctacagtctgggccgcacgccgccttcc
ctccctagaccggggccctgctggaaagaatacatcccattccggcgtcccagcatgggg
agcttagagaggccccaccacacacaaaggtctttagctagtccttcctacctcactcct
ttgtacccacccagacaaacctcaatgtccccaatgcttgagccctcagatccacgacgc
caagctgccattttccctgagtcctccagatggtccccctcttttcaagacaccctgagg
tctgtccagcatcagtttatccctatgccgacctctaactctctaccatactaccagcac
tggccggatccgagaggggaaggcttgagacactctgactccagaagaggccctccaagg
tcctacctcccccggggcatcagctggccttcgccttattactccgccttcccacccagg
gaaggagatggctacaggcatccagacaggatgatggggagaagcggagatgctgagttc
agggacggtggcagggccagttatgccagtcagagcagcggtagaggcagcgccggtctc
tttagacagtccctgtctgtcactcccaccctgctcagctccccagaaaccacagaggag
catgaacgccacagagctgagatggagctggccgagaggagagtgaaaagaaggaacacg
tcagtagatgaaagttatgagtgggactccgctgatgcctgtttggactccgaggtcctg
gaggccaccaggtctggccagtgtcgagctggttttcagagaggcaggagggagacggga
tcggaccagactggtggcctccgggatcagcgacagacaggcccacctccccctgtcatc
cctcctcgctcgctcagtgaggcacgcttcaacgccctccgcctggagtaccaagagtac
aggcgggctcagggatccgcctgtacccgggaaccctgcttccaccccagccatgattcg
gattctgactccagctcagcgctgctctag
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