Xiphophorus hellerii (green swordtail): 116730413
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Entry
116730413 CDS
T07363
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116730413 (gle1)
03015 mRNA surveillance pathway
116730413 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116730413 (gle1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116730413 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
116730413
NCBI-ProteinID:
XP_032435511
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Position
12:complement(10241101..10251824)
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AA seq
728 aa
AA seq
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MPSENLRWETLEALKNSPKGQVTFDPYWSERGEHILAGCKETPSLSTHSAVILERIDSRS
LNKSSFLDSSSIDFEEKPASVSSSESKADLNSKISSLSSTPSLKNQPKDVPESLPKLSML
PALNDETRGESPEEREDVSEVPAPPSPPAISLLSPRAMETAGHIIRFQKKQQEKAKVALQ
ERQSLQEKLVESVASTELEHLKRFEELRELKQRQEFQSIRDMMDRETKELMGRQEKLKEE
QRHRIKILNLRVRELEQQRHREAELEKQRQAEGRERLRSLNSIQEEILQLNQLLEPSAQT
NSHLPAASLASHSLRGNQLCSQVSEVVRKTAEGEFPSVEDMAVAERALCEMRSVIRQMEE
EAARDQEKKKKDQEQEEERRKQEALQAQQEAQKKAEQAAKEKAQKKGLQNNAEESTMKWY
KELQNSAAQCSQSFEQLNSPKDAQTKKLKLELQKAATIPVSQISTNSGSQLREIFDRIDK
LLSGRAVVSGGKSVSASQHPQGLEFVGYKLAEKFVKQGEEEVASHHEAAFPIGVVASGIW
ELHPQVGDLILAHLHKKCPYSVPHYPPMKDGTPVDEYQKILGYRVDDCGVEGQDSFLKRM
SGMIRLYAAVIQLRWPYGSKQGAVPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCG
NALMKQYQGQFWKLILLLKDEYFPRIEAVTSSGEMGSVIRLKQFLETSLQSRQISPPKGQ
LSATFWRS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaaaatctacgatgggaaactttagaggccttaaaaaattcaccaaaagga
caagtgaccttcgacccctactggtcagagagaggagagcatattttggctgggtgtaaa
gagacccccagcttgtccacccactctgcggtcatattggagcggatcgactctcggtcg
ctgaacaagtcgtccttcttggactccagctccattgactttgaggagaagcctgcctct
gtttcctcctcagaatccaaagcagatctcaacagcaaaatcagctctctttcttcaact
ccgtctctgaaaaatcaaccaaaagatgttcccgagtcgctaccaaagcttagcatgctc
cctgcgcttaacgatgagacgagaggtgaaagtccagaggaaagagaggatgtcagcgaa
gttcccgctcctccttccccacccgccatttccttgctgtcgcccagagccatggagacg
gccggccacatcatccgcttccagaagaagcagcaagagaaggccaaggtggcgctccaa
gagcggcaatcgttgcaggagaagctggtggagtcggtggcgagcaccgagttggagcac
ctgaagcgcttcgaggagctgagggagctgaagcagcggcaggagttccagagtattcgg
gacatgatggacagagagaccaaagagctcatggggcgccaggagaagctgaaggaagag
cagcggcaccgaataaagatcctgaaccttcgcgtgagggagttggagcagcagcgccac
cgtgaggcggagctggagaagcagaggcaggcagagggcagggagaggctgcggagcctc
aacagcatccaggaggagatcctgcagctcaaccagctgctggaaccgtccgcccagacc
aactctcacctcccggcggccagcctcgcctcacacagtctccgcggcaaccagctgtgc
tcccaggtgtcggaggtcgtgagaaagacggcagagggagagtttcccagcgtggaggac
atggctgtggcggagcgagcgctctgcgagatgaggtcggtgatccggcagatggaggag
gaggcggccagggatcaggagaagaagaagaaggatcaggagcaggaagaagagcgcagg
aagcaggaggctctgcaggcgcagcaggaggcgcagaagaaggcggagcaagcagccaaa
gagaaggcgcagaaaaaagggctgcagaacaacgcagaagagagcaccatgaagtggtac
aaggagctgcagaactcggccgctcagtgctctcagtccttcgaacaactcaactctccc
aaagacgctcagacgaagaagctgaagctggagctgcagaaagccgccaccatccccgtc
agccagatctccaccaactccgggtcgcagctccgggagatcttcgacaggatcgacaag
ctgctgtcgggacgggccgtggtgtccggcgggaagtccgtctccgcctcccagcatcct
cagggcctggagttcgtcggctacaagctggcggagaagtttgtgaaacaaggtgaggaa
gaggtggcgtcccaccatgaagccgccttccccatcggcgtggtggcctccggcatctgg
gagctgcacccccaggtgggagacctcatcctggctcacctgcataagaagtgcccatat
tcggtcccacactaccccccaatgaaggacggcacgcctgtggatgaataccagaagatt
ctgggttaccgtgtggatgactgtggggtcgaaggtcaggacagttttctgaagcggatg
tctgggatgatccgtctctacgccgctgtgatccagctgaggtggccctacggctccaag
caaggggctgttcctcacgggctaaaccacggctggcgctggctggcccagatgctcaac
atggagcctctggctgacatcacagcgacgctgctcttcgacttcctggaggtttgtggc
aacgccttgatgaagcagtaccagggtcagttctggaagctcatcctgctgctgaaagac
gagtatttccccaggatcgaagcggtgaccagcagtggagaaatgggctccgtcatcagg
ctgaagcagttcctcgagacgtcactgcagagccgacagatcagcccgcccaaaggccag
ctgagtgccaccttctggagatcctga
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