Xiphophorus hellerii (green swordtail): 116730480
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Entry
116730480 CDS
T07363
Name
(RefSeq) transcription factor COE2 isoform X1
KO
K09103
early B-cell factor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116730480
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116730480
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
116730480
NCBI-ProteinID:
XP_032435641
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Position
12:16376943..16415716
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AA seq
591 aa
AA seq
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MFGIQEQLIRDVSGLKERTLGEEMDPVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTAFVDFVEHEKEQTGEKTNNGTHYKLQLLYSNGV
RTEQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESVENTMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPEKLAKEILLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGSYPSQLGVSIGDPGQSSQGYIRNSSSLSPRGYPSASTPQQSSY
GGSGGMTGGYGTVPMTSLGVPGSPGFSSASPTSSPYIMPASPTIPGSSSSSSSLLPFSSF
PSAAKQKSAFAPVLRPQGSPSPACPASGGNSFRGSHPTHYLTPLSELTNAV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggagcagctaatacgagacgtgagcggattaaaagagagaactctt
ggagaggagatggatccagtccggtcgtgggtgcgtaatgttggagttgtggatgcgaac
gttgcagcgcaaagtggagtggccctgtcaagagctcactttgagaagcagccgccttcc
aatcttcgcaagtccaactttttccactttgtcctggccctctatgacagacacggccag
cctgtggaggtggagaggacggcgtttgtggactttgttgagcatgagaaggagcagaca
ggagaaaagacaaataacggcactcactacaagctacagctcctctacagcaatggggtt
cgtacagagcaagatctttacgcacgacttatcgactctgtcaccaaacagcccatatcg
tacgagggacagaacaagaacccagaaatgtgcagagttctgctcacgcatgaggttatg
tgcagccgctgctgcgagaagaaaagttgtggcaatcgcaatgagacgccctctgatccg
gtcatcattgacaggtttttcttgaagtttttcctgaaatgcaaccagaactgcctgaag
acagcaggcaacccgagggatatgaggagattccaggtggtcttgtccagcacagtgagt
gtagatggacacgtcctggccgtgtcagacaacatgttcgtccacaacaactcaaaacat
ggccggagagctcgccgactggagccgggagagtctgtggagaataccatggaatatgcc
accccctgcatcaaagccatcagccccagcgaaggctggaccaccggcggggccatggtc
atagtcattggggagaacttcttcgacgggctgcaggtggtgtttggaagcatgctagtg
tggagtgagctgatcactccgcacgccattcgtgtacagacgcctcctcgacacatccct
ggggtcgtggaggtcaccctgtcgtataaatcgaagcagttctgcaagggagcccctgga
cgcttcatctacacagcccttaatgagccaactatagactacggttttcagcgacttcag
aaagtaattccccggcatccaggtgacccagagaagctagccaaggagattcttctaaaa
agagcagcagatcttgttgaagccctatatggaaatccacacagtaatcaggacatgctg
ctgaaacgtgcagctgacattgccgaggcactctacagtgttccccgtcctcacagccag
ttgcaggcgctgcccagttcaccagcccatgggagcgtcatgggcctgggctcctatcca
tcccagctgggggttagcattggagatccaggacagagcagccaaggttatatccgtaac
tccagcagtttgtctccgaggggttacccctcagcttccactccccagcagtcgagctac
ggaggcagcggagggatgactggaggctacgggacagttcccatgacaagtctgggagtt
cctggatctcctggcttcagcagcgcttcacccacaagctctccctacataatgccagcg
agccccacaataccaggaagctccagctcctcgtcttctctcttgcctttctcctctttc
ccttctgctgctaaacagaagagtgcttttgctcccgtcctcaggccccaaggttctcct
tcccccgcctgtcccgcctcaggggggaacagcttcagaggtagtcatccaactcactat
ctgaccccgctgtctgaactcaccaatgcagtctaa
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