Xiphophorus hellerii (green swordtail): 116730492
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Entry
116730492 CDS
T07363
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116730492
04020 Calcium signaling pathway
116730492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116730492
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116730492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116730492
NCBI-ProteinID:
XP_032435665
LinkDB
All DBs
Position
12:32424618..32513397
Genome browser
AA seq
2324 aa
AA seq
DB search
MARFEDDASSRFRGSGPAGPARGANRQPGPPGGQRMYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPALDKTPLSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYIGK
FHRTCFKNGTKEQVADFPCGPEPPARTCGKGNICEEYWLGPNFGITNFDNILFAILTVFQ
CITMEGWVDILYNANDASGNMWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKHNPNSVLKR
TKKSKNDLINAEEGEDHFTDISSVAPPGSPFARASVKSKNESSSYLRRKEKRIRFTIRHL
VKSQTFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMTMKMYGLGP
QTYFHSSFNCFDFGVIIGSIFEVVWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQ
ILTGEDWNAVMYHGIESQGGVHKGMFSSIYFIILTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAISKKLALQKAKEVQEVSPMLAANISITTSYVCTPVHHYLSNEQQRSVKTM
SVWEQKASQLRRHNQASCEVLYDPEECVRLPSGLQMRPDMKTHLDRPLVVGHSDMLLMRG
HQHHRHKPGTPEEAETAADPPSTPPHSHHRHNRHRDRGRAKVKEEPNDSGGDSGKDGRQH
VHHSRFKNHDYSCRQEEKSRRSSSKDRSRKHHHHSSMDESAGGEATKEREHRHHHSHRQS
RGGNGTVNGGGRGEHRLHRKDGRSSNKDGDREGKRRRHHTHGSRSQSRAEGEESNEREEP
NTNRFGDSDDISQQPGSLETSSQPEDSDNQKNVRRTGQTSIRIPPVTITTPGEITLIQMN
STDNESVPMNEKNLKDQCHSGPRPILAYSSMFIFGQTNPVRRLCHYIVTLRYFEMSILVV
IAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFAFSSFMGSQQAVTRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKALEKDCKGQFLD
YDKETVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDLGPSPGY
RIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKP
LTRYMPEDTQSFQYRMWKFVVSAPFEYSIMIMIALNTVVLMMKFYEAPDFYEAMLKYLNI
VFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEIKTTDRLLNLSFLR
LFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNE
DTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRPCDELSGTSGKDCGSDFAYF
YFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKY
SDMYQMLLHMPPPLGLGKKCPPRVAYKRLVKMNMPIADDNTVHFTSTLMGLIRTALEIKL
ASGMVLQRLMDAELKKEISTVWPSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYLKQS
RARRLQQMANSDPQCKVEALFKPLLPLTHMQGSPSAPQSQQSPESFRQVVSSNSINNGGM
LPGYDPRNKSVPSTGMERPTEGVYPKPKRTISKGPSVDTSNAVNQESVGLNSVSSTVPVP
VPGPGLESQGRAASMPRLNVELQSGRDASSMRRSVTTVAPQRPQEVNLRDYTLEKPRQER
THHHHHHHHCHHRRDRDKDKRQGSLDTPLGGQPPNSAGGPEQPATEPAASRERAHKRGRS
HERKHHHSSADKQRYYSCDRYCSRERCCPISATAACSYREEQETSKKQGSGLVKGSQDAS
RSGSSTPSRGRRQLPQVPHTPRPGVGYKTAYPSQVHFVSSQASQSPGRLSRGLSEHNTLR
HSGSYYFPCPVTRISSEPFLGQGHGEALGSPYSSFQNQLDVFQDVASLSPTPSAEQSPRT
TLPRRMGALHPTFGVDPSVPNGYHLSLGGSTSPGTGYRALRYRR
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttgaagacgatgcgtccagccgcttcagaggcagcggccccgcggggcca
gccagaggggccaaccggcagccggggcctccggggggccagaggatgtacaaacagacc
atggctcagagagccaggaccatggctatttacaaccccattccagtcaaacagaactgc
ctcaccgtcaaccgctccctgtttatctttagcgaggataatatcatccggaaatatgcc
aaaaagatcacagaatggcctccgttcgagtacatgatcctggccaccatcatagcaaac
tgcatcgttctggccttggagcaacacctgccagctttggacaaaaccccgctgtcagaa
cgtttggatgacacagagccctactttattggaatattttgctttgaggcaggcatcaag
atcattgccttgggttttgcttttcacaaaggctcctacctacgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcctggccactgtaggggctgattttgatctg
agaacactgagagcagtcagagtcctgcggcccctcaaactcgtctctggcattccaagc
cttcaagtggtgttgaagtccattatgaaagcaatggtacctctgctccagattggaatg
ctgcttttctttgccatcctcatgtttgccatcatcggcctggacttctacattggcaaa
tttcatcgaacatgcttcaagaatggaacaaaagagcaggtggcagatttcccttgtgga
cctgaacctccagcaaggacctgtggcaaagggaatatctgtgaagagtactggcttgga
cctaactttgggatcacaaactttgacaacatcctgtttgccattctcactgttttccag
tgtatcaccatggaaggatgggtggacatcctgtacaatgccaatgatgcctctgggaac
atgtggaactggctctacttcatccctctcatcatcattgggtcgttcttcatgctcaac
ctggtgctgggcgtgctgtcgggagagtttgcaaaggaaagggagcgtgtggagaagagg
caagaattcctgaagcttcgtcgacagcagcagattgagagagagctgactggctatttg
gagtggatctgtaaagcagaagaggtgatgttggctgaggaagacaagaacgctgaggag
aagtctctggatggagcttggtacaaaaggaaacataaccccaactctgtgctgaaaaga
acgaagaagagtaagaatgacctcatcaatgcagaagaaggggaggaccatttcactgac
atttcatcagttgcccccccagggtcgccatttgcacgtgcgagtgtgaagagcaagaac
gagagctcgtcttacctgaggaggaaggagaagagaattcgcttcaccatccgccacctg
gtcaaatcccagacgttttactggactgtattatgtcttgttggcctcaacacactgtgt
gtagctatagtacactatgaccagccagagtggcttacgtatgcattatacctggccgag
tttgtgtttctgggcttgttcctggctgagatgaccatgaaaatgtacggccttggaccc
cagacctacttccactcttcttttaactgttttgattttggggtcattattgggagtatt
tttgaggtggtctgggctgcgatcaaacctggtgcttcatttggtatcagtgtcctgaga
gctctgcgacttctccggatcttcaaagttaccaagtactggaactctttgaggaacctg
gtggtatccctactcaactctatgaagtccatcatcagtctgttgttcctgctcttcctc
ttcatcgtggtctttgctctgctgggaatgcagttgtttggtggacagtttaactttgag
gatgaaactccaacaaccaactttgacacattcccagctgctattctcactgtgtttcag
attctaactggggaggactggaatgctgtcatgtaccatgggatagaatctcagggtggt
gtgcataaaggaatgttttcctccatttatttcatcattctcactctttttggaaactac
acactgctcaacgtgttcttggccatcgctgttgataaccttgcaaatgcccaggagctt
acaaaggatgaagaggagcaggaggaggccatcagcaaaaagctggctcttcagaaggct
aaagaggtacaggaagtcagccctatgttggctgctaacatttcaatcacaacgagttat
gtctgcaccccagtccaccactacctgagcaatgagcagcagaggtcagtcaagacgatg
tctgtctgggagcagaaagccagccagctgaggaggcacaatcaggcgagctgcgaggtc
ttatatgatcccgaggagtgtgtccgcctcccctctggccttcagatgcggcctgacatg
aagacccaccttgaccggcccctggttgttgggcattctgatatgctgttgatgagaggc
catcaacatcaccgtcacaagccgggcactccggaggaagcagagactgccgctgatcca
ccgtccactccgcctcattctcatcaccgtcacaaccgccacagagacagagggcgggct
aaagtgaaagaagagcccaatgacagcggtggtgacagtgggaaagacgggaggcaacac
gtccatcacagccgcttcaaaaaccatgactacagctgtagacaagaggagaagagcagg
aggtcctccagcaaagacaggagcaggaagcatcaccatcacagttcaatggatgagagt
gcaggtggggaggccacaaaagagagagagcatcggcatcatcattcacatcgacagtcc
agaggggggaatgggacagtgaatggtgggggtcgaggcgagcacaggcttcaccgtaaa
gatggtcgatcatctaacaaggacggggatagagagggcaagaggaggaggcatcacaca
cacgggtcgaggagtcagtccagggctgaaggagaggagtcaaacgagagagaggagcca
aatactaacaggtttggtgactcagatgacatttcccagcagccaggctctctggaaacg
tctagccagccagaggactcagacaaccagaagaatgtcagaagaacaggccagacctcc
atccgcattccccctgtgactatcaccacacctggagagattactctgatacaaatgaac
agtactgacaatgaatcagtgcctatgaatgagaagaacctgaaggatcaatgtcactct
ggaccaagacccatcttagcttacagctcaatgtttatctttggacagaccaacccggtg
aggcggttgtgtcactacattgtgaccctgcggtattttgagatgtccatcctggttgtt
atcgcaatgagcagcattgctctggcagctgaggatccagtctggacaaatgcccctcgc
aacaatgtgctcaaatatctggactatgcctttactggggttttcacgttcgaaatggtg
atcaaaatggtggatcttggactgcttctccatcctggatcttacttcagagacctgtgg
aacattctagacttcatagtggtcagtggggctctggtggcatttgcattttcgagcttc
atgggatcgcagcaagctgtgaccagggggactaaaggcaaagacatcagcaccatcaag
tcactgagggttctcagggttcttaggcctctcaagaccatcaagcgtctgccaaaactc
aaggccgtttttgactgtgtggtcaactctttgaagaacgtgctgaacatcctcattgtt
tacatcctcttcatgttcatttttgctgttattgcggttcagctcttcaagggaaaattc
ttctattgcactgatgagtccaaagccctggagaaagattgcaaaggacaatttcttgac
tatgacaaagaaacggtggcagcaatgccaagagagtggaaaaaatatgaattccattat
gacaatgtactctgggccttcctaactctcttcacagtctcaactggggagggctggcca
actgttctgaaacactctgttgatgctaccttcgaagatctaggtcccagccctggctac
cgcatagagatgtccatcttctatgtggtctactttgtggtctttccatttttctttgtc
aacatctttgttgctctgataattatcaccttccaagaacagggagacaaggccttgtct
gaatgcagtttggaaaagaatgagagggcttgtattgactttgccataaatgcgaaacct
ttgacacgctacatgccagaggacacacaatccttccagtacaggatgtggaagtttgtc
gtttcagctccatttgagtactcaattatgatcatgattgctctcaacactgtggtactc
atgatgaagttttatgaagctccagatttttatgaagcgatgctgaagtacctcaacata
gtgttcaccactcttttctctctggagtgcattctcaagatcatcgcctttggtcccctg
aactacttaaaagatgcctggaatgtatttgactttgtgacagttttggggagcatcact
gacatcctggtgactgaaatcaaaactacggacagactattgaatttgagcttcctgagg
ctcttcagagcagctcggctcatcaagttgctgaggcagggctacaccatccgcatcctg
ctctggacctttgtccagtctttcaaggccctgccatatgtgtgcctgcttattgccatg
ctgttcttcatttatgccatcattgggatgcaggtgtttgggaacattgagctgaatgaa
gacacagctatcaaccaccataacaacttccgcacttttctccaggctcttatgctgctg
ttcagaagtgcaactggggaagcctggcatgagatcatgttgtcgtgtctgagtcatcga
ccctgtgatgagctctcagggaccagtgggaaagactgtggcagtgattttgcctatttc
tactttgtctccttcatcttcctctgctccttcctgatgctgaatctctttgtggctgtc
ataatggataactttgagtacctcaccagagactcctccatcctggggccgcatcatctt
gatgaattcattcgagtttgggccgagtatgacccagctgcttgtggccgtatcaagtac
tccgatatgtatcagatgctgctacacatgcccccacccttaggtttgggaaagaaatgt
ccaccaagagtcgcctacaagcgtcttgtcaaaatgaacatgcccatcgctgatgacaac
acagttcactttacctccactctgatgggcctgattcgcactgcgctggagatcaagttg
gcctcaggtatggtgctgcagcgtttaatggatgctgagttaaagaaagaaatatccaca
gtttggccgagcctctctcagaagaccatggatttgttggtaacgccacacaaacccaat
gagctaacggtaggaaaggtttacgcagcactgatgatctttgactacttgaaacagagt
cgagcgaggaggctgcagcagatggccaactctgacccccagtgcaaggtcgaagctctg
tttaagccattgctgcctctgactcacatgcagggctcacccagtgctcctcagtctcag
caaagcccggagtcattccgtcaagtggtcagctctaactccatcaacaatggagggatg
ctaccaggttatgaccccagaaataaatcagtaccttccactgggatggagaggcccacc
gagggggtctatcccaaaccaaagagaaccatatccaaaggcccatcagtggacacatca
aatgctgtcaatcaggagtcagtagggctgaacagtgtcagcagcacagtcccagtccca
gtccctggtccaggtctggagagccagggcagggctgcttcaatgcctcgactcaacgtg
gagctccagtctggtcgtgatgctagctctatgagacggtctgttaccactgtagctcca
cagcggccccaggaggttaaccttagggactacaccctggagaaacctcgtcaggagaga
acacatcaccatcaccaccaccatcactgccaccaccgcagagaccgggacaaagacaag
agacaagggtctttggatacccctcttgggggccaacctcccaactcagctggtggacca
gaacagccggcaactgaacctgctgcctccagagagcgagcccataaacgtgggcgctcc
catgaaaggaaacaccatcactcctcagcagacaagcaacgctactactcctgtgaccgc
tactgcagccgggaacgctgctgtcccatatctgctactgccgcctgctcctaccgagag
gagcaggaaaccagcaaaaagcagggcagtggtttggttaaaggcagccaagatgcatca
agatccggttcaagcacaccaagccgtggacgccggcagctcccacaggtcccacacacc
ccacgacctggggtgggatataagactgcatacccttctcaagtgcactttgtgtctagt
caggcttctcagagtcctggccgactaagccgtggcctgtcggaacacaacaccctccgt
catagtggttcctactacttcccctgccctgtcactcgtatcagctcagagccctttctg
ggccagggccatggtgaggccctgggcagtccttacagcagcttccagaaccagctggat
gtcttccaggatgtggcatcactgtcccctacccctagtgctgaacagtcaccccggacc
acactgcctcgaaggatgggagccctacatccaacttttggtgtagacccgagtgtgccc
aatgggtaccacttaagtttagggggcagcaccagcccaggcactggatacagggcactg
aggtacagaaggtag
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integrated database retrieval system
