Xiphophorus hellerii (green swordtail): 116730608
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Entry
116730608 CDS
T07363
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116730608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116730608
03021 Transcription machinery [BR:
xhe03021
]
116730608
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116730608
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
116730608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116730608
NCBI-ProteinID:
XP_032435843
LinkDB
All DBs
Position
13:complement(2276651..2342195)
Genome browser
AA seq
740 aa
AA seq
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MFVPLPVPFVFQRTASDFSAWRLKSSLVPRSSPDIRMSKAPGEEKPGAEYPGDGSDSDRN
SPDDQLQIQKMRSSPYSLSPTAAGSKVKSEESSEITHSAAAAAAAAAAPPVAPPSQQQQQ
QQQQAQHHHTQLMLASSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAAHAAA
QQQANQQQQQPTKQEQPVQAPPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQ
FLLSQPAQAQQPQQGLLSTANLIQLPQQSAGGLLTSPPRMGLQAQREKSSDAGSSSSSAA
SVAASGSSSAVTSVGASSASSSAMASSLTSGLNPGGQTAQMSEEPSDLEELEQFARTFKQ
RRIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMA
VDSMLPSPSSISSPMLGIEGLPGRRRKKRTSIETNVRVVLERNFNTNQKPTSEEILLMAE
QLNMEKEVIRVWFCNRRQKEKRINPSSSSTPPLPSQTSPVVTHKVHCYSPHMISSQSLSQ
VTTSLSTTGASSSPSASCPMTPISSVAMSSSATPPPPHSTASPAPSSLGTAGLATGNTMM
GVSTGMNQALIGSNPLATMQALAASGGQLPISSLEGAPGHMFLSGHGGHSVPASLRPSLF
LNRPGLLPMVTCSTPTSSMPMGLVSCGPRPSYCQSSPSGTSNLMSPTSCPEESVSPCSSP
ASFCSFSEASPPPLGGAMAE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggtcccgcggtccagccccgatatcaggatgtccaaagca
ccaggggaggagaaacctggagctgaatatccaggcgacggttcagactctgacagaaac
agtcctgatgaccagctgcagatccagaagatgagaagcagtccttacagcctttcaccc
acagcagcaggcagcaaggtaaagagcgaagagagctcagagataacacacagcgccgct
gctgctgccgctgccgccgctgctcctcctgttgctccgccctcccaacaacaacaacag
caacagcaacaggctcagcatcaccacacacagctgatgctcgccagcagtcagctggca
gggctcgccgctctcctcccggcccagcagcagctgctcctccagcaggctcaggctcag
ctgctggcggccgccgtgcagcagtccaacgccgctcacgccgccgcccacgccgccgcg
cagcaacaagccaatcagcagcagcaacagccaaccaaacaggagcagccggtccaagct
ccgcctccacagctggcgctgtcgcagcccatccagctgaccgcgcaggacatccagcag
ctgctgcagctccagcagctggttctgatgccgggtcatcccctccagtcgccggcccag
ttcctcctgtcccagcctgcacaggcgcagcagccgcagcagggtttgctctcaacagca
aatctgatccagctacctcagcaaagcgcaggaggccttctcacaagcccgcctcgcatg
ggactccaagcacagagggagaagagcagcgacgcaggaagcagcagcagcagcgcagcc
tctgtagccgccagcggaagcagcagcgctgtaacgtctgtcggagccagctctgcatcc
agcagcgccatggcctcctccttgacctctggcttgaatcccggcggtcagacggctcaa
atgagcgaagaaccgagcgacctggaggagctggagcagttcgcccgaaccttcaagcag
cggcgcattaaactcggattcacacagggtgacgttggcgtggcgatggggaaactgtac
ggaaatgacttcagccagaccaccatctctcgcttcgaagcgttaaacctgagctttaag
aacatgtgcaagctgaagccactgctggagaagtggttgagtgatgcagaaacgatggcg
gtggacagcatgctgcccagtccgtcctccatctcctcccccatgctgggcatcgaagga
cttcctggccgacgcagaaagaaacgcaccagcatcgagacgaacgtacgagtggtgctg
gagcgcaacttcaacacgaaccagaagccgacgtcggaggagatcctgctgatggcggag
cagctcaacatggagaaggaggtgatccgtgtctggttctgcaaccgccggcagaaggag
aagcgcatcaatccgtcgagcagcagcaccccacccctgcccagccagacctcgcctgtc
gtgacgcacaaagtccactgctacagcccccacatgatatcgagtcagagtctgtcccag
gtcaccaccagcctcagcacaacaggagccagctcttcaccctcagcttcctgccctatg
accccgatcagctcggtggccatgtcgtcgtctgccactcctcctcctcctcacagcaca
gccagcccggctccttccagcctcggcacggccgggcttgccaccgggaacacaatgatg
ggagtaagcacagggatgaaccaggccctcattggcagcaatcctctggctaccatgcaa
gcgctggcagccagtggcgggcagcttcccatctccagcctggagggggcgccgggccac
atgtttctgagtggacatggcggtcactccgtccccgcctccctgcgcccctctctcttc
ctaaaccgccccggcctcctgccgatggtgacctgctccacgccgacttcctccatgccc
atggggctggtcagctgcggccccagaccttcgtattgccaatcttcgcccagcggcacc
agcaacctcatgagccccacttcctgcccagaggagtctgtgtctccctgttcaagcccc
gcctctttctgctccttcagcgaagcttcaccgccgccactgggaggagccatggccgag
tga
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