Xiphophorus hellerii (green swordtail): 116730656
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Entry
116730656 CDS
T07363
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116730656 (vps52)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Others
EARP complex
116730656 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
116730656 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF3440
MscS_porin
Motif
Other DBs
NCBI-GeneID:
116730656
NCBI-ProteinID:
XP_032435906
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Position
13:complement(5770375..5782362)
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AA seq
723 aa
AA seq
DB search
MAEGVPAGIIEADVNITGNQTQIAMAYLQDEKSDGDITNLNLGELDLTTDEFILDEVDTH
IQANLEDDLVKEALKTGVDLRQYSKQVEAELQRIEQASIKDYIKESQNIALLHNQITACD
SILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPGV
MISTILESPVTEQEFLEQLHELNTKINFAKELSFRETLACSDIQDIVDRLKLKAVSKIRE
FILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSYF
KSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAILSPAELE
GPILVPHTAQRGDSRYPYETLFRSQHYALLDNSCREYLFLCDFFMVTGNSALDLFNCIMG
KTLSMFMKSMSTYVSDCYDSIAIFLCIHIILRFRAITAKRTIPALDKYWDAVLELLWPRF
ELILEMNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQLQ
VEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVESFQQLLLARTQEF
IEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNEEARITQLVRGFSSTWKQSVESMSQDV
MRSFTNFKNGTSIIQGALTQLIQYYHGFHKVLNQPTFRSLAVRSELINLHHLMVEVKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggagtacctgctggtattattgaagccgacgtaaacataactggaaaccaa
acacaaatcgctatggcgtatctacaggacgagaaatctgatggagacatcactaacctt
aacttgggagaactggacctgaccactgatgagttcatcttggacgaagtggacactcat
attcaggcaaacttggaagatgatcttgtgaaagaagctcttaaaacgggtgttgaccta
cgtcagtactctaagcaggtggaggcggagctgcagaggatcgaacaggcctccatcaaa
gattacattaaggaaagtcaaaacattgctcttctgcacaaccagatcactgcgtgtgac
tccatactggagcgaatggagggtatgctgagtggctttcagagcgacctttcctccatc
agcagtgagatccagaccctgcagcagcagtcagtcagtatgaacgtccgattgaagaac
aggcaggccgtacgcagccacctcagccagctggtggacgagctagtggtacccggagtc
atgatctccaccatcctggaaagtccagtgacggagcaggaatttcttgagcagctccat
gagctcaacacaaagatcaactttgccaaagagctgagcttcagagaaactttggcctgc
tccgacatccaggacattgttgatcgcctcaaactcaaggcggtctcaaagatcagagag
tttattcttcagaagatctactccttcaggaaaccaatgacaaactatcagatcccacaa
aatactctgctgaaatacagatttttttatcagtttcttttggctaatgaaagaaccgtt
gccaaggagatcagggacgagtatgtcgacactatgagcaagatttactacagttacttc
aagtcctacagtggacggctcctcaaagtgcagtatgaggaggtagcagacaaagatgac
ctgatgggagtggaagatacagctaagaaaggttttttctccaaaccgtctttaaagagc
aggaacaccattttcactttgggccagaggggggcaatattgagtccagcagagctggag
ggtcccatcctggttccacatacagctcagagaggggacagcaggtatccgtatgagacg
ttgttccgcagccagcactatgccctgctggacaacagctgcagagaatacctcttcttg
tgtgactttttcatggtgactggaaactcggccctcgaccttttcaactgcatcatgggg
aaaactctcagcatgttcatgaagagcatgtccacctacgtgtcagactgctacgacagc
atcgctatctttctctgcatccatatcatcctcagattcagagccatcacagcgaagagg
accatccctgctcttgacaagtactgggacgccgtgttggagctgctgtggccgaggttt
gaactcattctggagatgaatatccagagcatcagaaacacggaccctcagaaactggga
gtgctggacaccagaccacactacatcactcggcgatatgcagaattttcctccgccatt
gtgagcatcaatcaaacatttcctaatgagaggaccaacactctgctgggccagctgcag
gttgaggttgaaaactttgtgctgaagatggcggcagaatttccctccaggagagatcag
ctgatcttcctcatcaacaactacgacatgatgctcagtgtcctgatggagagggcagca
gatgacagtaaagaggtggaaagttttcaacagttgctccttgctagaacgcaggagttt
atcgaggagattctgtctcctccctttggggggatgattgccttcgtgaaggaggctgag
gcactgatggagaaagggcagctagatcgactgaagaatgaggaagctcggatcactcag
ctggtccgagggttttccagcacctggaagcagtcagtggagtcaatgagtcaagatgtc
atgaggtccttcactaactttaaaaatggaaccagcatcatacagggcgctctgactcaa
ctcatccaatactaccacggctttcataaagttctgaaccagccgacgttccgcagcctg
gccgtccgctcagagctcatcaacctccaccatctcatggtcgaggtgaagaagcacaaa
cccaatttttaa
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