Xiphophorus hellerii (green swordtail): 116730697
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Entry
116730697 CDS
T07363
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116730697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116730697
03021 Transcription machinery [BR:
xhe03021
]
116730697
03036 Chromosome and associated proteins [BR:
xhe03036
]
116730697
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
ARID
116730697
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116730697
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116730697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116730697
NCBI-ProteinID:
XP_032435974
LinkDB
All DBs
Position
13:28781770..28872759
Genome browser
AA seq
2288 aa
AA seq
DB search
MAAQVASVAALNTSPPSELKKPDRDPQDESVPGEKQHENRDTGPDAGSPVQKELQDGSDD
GNTGGGGDPDMKNGNGNLPRVNNNSSNQNDTGGPEGNNLPGLGHHHPGPFPPPPYGYNQP
YSRGPFPQHGGQQSPGMAAASGPGMMDPYPANSHEHGYHNNYNSYTPFQNRTSYQGQGYG
PMSSPRNNQPPAAGGQPGKQQQQQPAGGTTAMAASYSNQRYNMGNQQPTSTPTLNQLLTS
PSSARSYSSYPQGDYNNQEGANKGVGDMSSTQFGGVHPGWQQRTHHPSPMSPGNTGQPGS
RNQPPSPMDQVGKMRGQPYGGPNPYSQHQQGPSSAPGPQQGGSYPAQSYGAPGPQRYPMG
MQSRTPGTMGGMQYGQQMSAYGQQGPGGYGQQNQGYYSQHGPPPHPGQQQPPYSGQTQGS
SAAPYSQQGHPSQPPGQHAQSGPPYQQSPGPHGPAAGQPSYSQPPQSHSGQPPYVSPQQQ
QQQQQTQQQQQQGPGPQSQQGPQGQPGYQQATGPGQTPQQQTPPQQQGPPQQLGGPPPQA
QQPPGHGQQSQQSPYSQTPPLQQPPQQQQQQPQQQQQQSPYQRFPPPPQELSQDSFSSQS
SAPPSNQPTKSGQEDSMQGRPSSLPDLSGSIDDLPTGTEAVLSPGVSTSGVSSSQGEQSN
PAQSPFSPHTPPHLPGIRGPSPSPVGSPASVTPSRSGPLSPASVPGNQMPPRPPSVQSDS
MMHSSMNQAPMGPDRVYMRNPQMPPYGSPGQPGSALSPRQSTGGQIHSGMGPYPQNNTMG
NYGPQGAQYGPQGYPRQPGYTGMPNTNYPSGPGMGGSMNPMPAQGSGSPYGSMPPGRIGP
GQMGTRPYGPGMGPNMGSMPPQVGSGMCPPPGMNRKDGGPTMHHGPANSIHTRPPGYPNV
NQGMMGSAPPYGPGMNSMHSVMNQGAPGPYPVGGNMANNTPGMAPGSEFGMDKINPAQKI
NNKVDGTPKPESKKKSSSSTITNEKITRLYELGPEPERKMWVDRYLAFAEEKAMGMSNLP
AVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATSLNVGTSSSAASSLKKQYIQCLYA
FECKIERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSATSSMAEGDLKPPT
PASTPHSQMPPMPGVRSSVNLQDPFADGGDPAFSRRNTMTPNSQGYQPGMGGPEMMSRMA
PYESNKDPFGGMRKAGEQFMPPNPNSGMGEQYNRGPPGPMGNMPMGQRQQYPYGYDRRQE
PGMGPEGNMGPAAPQPSMMPSGSDAGMYSPSRPPPQQRHDSYTNQYPGQGAPPGGPYPNQ
QPGMYPQQQPNYKRPVEAGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGHQGQQDIYNQYN
TYPGGERRPPGPQGQFPFPFGRDRGPSSAGPNSQSHMPPQMMTSSMPSGPDGPQGPVWQG
RNEMGYPNYPNRQGPPVPGQGPGYHGMNRSGEEMMPSDQRINHEGQWPGHVNQRQPPFGP
ASSGPPMTRPLPSTYQTSQNHIPQVSSPAPMSRSMETRTSPSKSPYMHPGIKVQKAGPPV
PASHIGQAPVQQPMIRRDVAFPPGSVEATQPHLKPRRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDGSITTFNLCQLPGFLELIVEYFRRCLIEIFGILKEYEVGDPG
QRTLIDPNAAEDSDDEIPIPECEDMDTDEEEDEDEENEEKKTNHDASSQVKVKEEEEESS
MKDKSSEDDDEEEKKESSTKEASSSTSGSSQDPNIHLEKPKQASKFDKLPIKVVRKKNPF
RLNHLSKLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESQMDLLKQRKRTLPATEGRKKVK
LLGTMENPEKSKFCLEEKVQQQQAQCSDPNKASTEKSPSSLSLCAPVTATIDDVLSARPG
SVTMEVVRGGAEEQKENGKYLFSINPDPQSRRNVKILEDEPHSKDETPLSTLSDWQDSLA
RRCICVSNIIRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEED
EGVSCDRDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAE
ALDPFPTLGPHSSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGER
KVAVCREMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQM
QGSPHFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNPLVSQVICD
VLFLIGQS
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgctgctctcaacactagcccgccttccgaactcaaa
aagccggaccgggacccacaggacgagtcggtaccgggcgagaagcagcatgaaaacagg
gacacgggacctgacgcgggatctccggttcagaaggagctgcaggacgggagcgatgat
gggaacactgggggaggaggggatcctgacatgaagaacggcaacgggaatctacccagg
gtaaataataacagcagcaatcagaatgatacaggcgggcccgaaggaaataacctgccc
gggctgggccaccaccaccccggaccctttcctccacctccttacggctacaaccagccc
tacagccggggcccttttcctcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttaccccgctaactcacacgaacacggctaccacaac
aactacaacagctacaccccgttccaaaacaggacttcctaccagggccagggatacggg
cccatgagctccccgcggaacaaccagcctccggcggctggggggcagccaggcaagcag
cagcagcagcagccagcaggaggaaccaccgctatggctgcctcctacagcaaccagagg
tacaacatggggaaccagcagcctacatccacgccaactttgaaccagctcctgacatcc
cccagctccgccaggagctactccagctacccccaaggagactacaacaatcaagaaggg
gccaacaagggagtaggagatatgagcagcactcagtttggtggggtccatccgggttgg
caacaaaggacccaccacccctctcccatgagcccgggaaacactggacagccaggcagc
aggaaccagcctcccagcccgatggaccaggtagggaagatgcggggccagccgtacgga
gggcctaacccctactcccagcatcagcagggcccttcctctgctccgggaccccaacag
ggaggctcctacccagcccagagctacggagctccgggtccccagaggtacccaatgggg
atgcagagccgcacaccgggcaccatgggtggtatgcagtatgggcagcagatgtctgcg
tatggacagcagggtccaggaggctacggccaacagaaccagggctactacagccagcat
ggcccaccgccccaccccggccagcagcagcctccatactctggccagacccagggcagt
tctgctgctccctactctcagcagggtcacccttcgcaaccaccgggccaacacgcccag
tctgggcccccataccaacaatccccagggccccatggacctgctgcagggcagccttcc
tacagccagcccccacagtcccattcaggacagccgccgtacgtctctcctcagcagcag
cagcagcagcagcagactcaacagcagcagcaacaaggtcccggtccccagagtcagcag
gggcctcagggccaacctggttatcaacaagccaccggaccagggcagacaccccagcag
caaaccccaccacagcagcaaggaccaccgcagcaactaggaggtcctcccccccaagcc
cagcagcccccaggtcacggccagcagagccaacagtcaccttactcccagacacccccg
ctgcagcaaccacctcagcaacagcagcaacaaccacagcagcaacagcaacagtctcca
tatcagaggttcccgcctcctccacaggagctttcccaggattccttcagctcccagtcc
agtgctcctccttctaaccagcccaccaagagcggtcaggaagacagcatgcagggccgg
ccgtccagtctgccggatctgtccggctccatcgatgacctgcccactggcaccgaggcc
gtcctgagtccgggcgtcagcacctccggtgtgtccagcagtcagggagagcagagcaac
ccggcccagtcgcccttttccccgcacaccccgccccacctgccaggcatccgcggaccc
tcgccatcccccgtgggctccccagccagcgtgaccccgtcccgcagcggcccgctgtcc
cctgcttctgtgccaggtaaccagatgccaccgcggccgcccagcgttcagtcggacagc
atgatgcattcttccatgaaccaggcacccatgggccccgacagagtgtacatgcgaaac
cctcagatgcctccttatgggtcccctggacagcctggctctgccttatccccacgccag
tcgacaggaggccagatacatagtggaatgggaccatatccccagaacaatactatggga
aactatgggcctcagggggcccagtacggcccacaaggctatcccaggcaaccgggctac
acagggatgcccaacactaactaccccagtgggcctggaatgggcggctccatgaacccc
atgccggctcagggcagcgggagtccgtacggaagcatgccacccggcaggataggcccg
gggcagatgggtactcggccctacggtcctggtatgggccccaacatgggaagcatgcct
cctcaggtggggtccggcatgtgcccgcctccaggtatgaacaggaaggatggggggccc
accatgcaccatggccctgcaaactccatacacaccaggccaccaggttatcctaacgtg
aaccaaggtatgatgggatcagcgcctccctatggcccaggcatgaacagcatgcacagt
gtgatgaaccagggagcgccggggccttacccagtgggtggaaacatggccaacaacacc
cccgggatggcacctggttctgagtttggcatggacaaaattaaccctgcccaaaagatc
aacaacaaagttgatgggactccaaaacctgaatccaaaaagaagtcgagctcttccacc
atcaccaatgagaagatcacccggctatatgagctgggcccggagccagagaggaagatg
tgggtggaccggtacctggcctttgccgaggagaaggccatggggatgagcaacctgccc
gccgtgggccgcaagcctctcgacctcttccgcctctacgtgtccgtcaaagagatcggc
ggcctcacccaggtaaacaagaacaagaagtggagggagctggccaccagtctgaacgtg
ggcacgtccagcagtgcggccagctcgctcaagaagcagtacattcagtgtctgtacgcc
ttcgagtgtaagatcgagcgcggcgaggacccacccccggacttcttcaacacggacaca
aagaagaaccaacccaagatccagcctccaagcccagctggttcagggtcccttcaaggg
ccccaaactccccaatctgccaccagttccatggcagaaggagacctgaagcctcccacc
ccagcctccaccccgcactcacagatgcctccgatgcctggtgtcaggagcagtgtgaat
ctgcaggatccgtttgctgatggtggagacccagcgttttccagaaggaacaccatgact
cccaactctcagggctaccagccgggcatgggcggtccagagatgatgagtcgcatggct
ccctatgagtcgaacaaagacccattcgggggcatgaggaaagctggagaacagttcatg
ccccctaaccctaatagtggaatgggcgaacagtacaacagaggaccaccaggtcccatg
ggtaacatgccgatgggtcaaaggcagcagtatccttatggatatgaccgaaggcaggaa
ccaggcatgggccctgaaggcaacatgggacccgcagcgcctcagcccagtatgatgcct
tctggttctgatgcagggatgtactcacctagccgtcccccacctcagcaacggcatgat
tcctacacaaatcaataccctggccaaggggctccccctggtggcccttacccaaatcaa
cagccaggaatgtatccacagcagcaacctaactacaagcggcctgtagaagcggggtac
ggccctccagccaagcgccacgagggggaaatgtacaacgttccctacagtggtcagcag
cagcctggaccccagtcctctgggcatcagggccagcaagacatctataaccagtacaac
acatatccaggaggagagcgcagaccaccaggcccacagggccagttcccctttcctttt
gggagagatagaggaccttcatctgcagggccaaactcccagtctcacatgcctcctcag
atgatgacaagctcgatgccttctggtcctgacggcccccagggccccgtatggcagggc
cgcaacgagatgggctatcccaattatcccaaccgacagggacctcctgtaccaggccag
ggccccgggtaccacggtatgaaccgttcaggagaggagatgatgccatcagaccaacgc
attaaccatgaggggcagtggcccggccacgtaaaccagaggcagcctccatttggacct
gctagttctggaccacctatgaccagacctttaccttcgacttaccagacttctcagaac
cacattcctcaggtgtcaagcccagctcccatgtcccggtccatggaaaccaggacatcc
cccagcaagtctccctacatgcaccctggcattaaggtgcagaaagccggccctccagtt
cccgcatcgcatatcggccaggctcctgtgcagcaacccatgattcgacgagatgtggcc
ttccctcccggctctgtggaagctacacagccccatcttaaacccagaaggcggctcacc
atgaaagacataggcactcctgaggcttggagagttatgatgtccctaaagtcagggtta
ttggctgaaagcacctgggccttggacaccattaacattttactgtatgatgatggcagc
attactacttttaatctttgccagctacctgggttcctggagctgatagtggagtacttc
agacgctgcctcattgagatatttggcatcctaaaggagtacgaagtgggagaccctggt
cagcgcaccctgatagatcccaacgcagctgaggactccgatgatgaaattcccataccc
gagtgtgaagacatggacaccgatgaggaagaggatgaagatgaggagaatgaagagaaa
aagaccaatcatgatgcctcctcacaggtgaaggttaaagaagaggaagaagaaagctca
atgaaagacaagtcctcagaagacgatgatgaggaagagaaaaaggagtcttctaccaag
gaagctagtagctctacctcagggtcttctcaggaccccaacatccacttggaaaagcca
aagcaggctagcaagtttgataaactccctatcaaggtagtgcgtaagaagaaccccttc
cgcttaaaccacttatccaagcttgggcagcgacagagttttgacagtggcctgatacac
tggagtattggcggtggcgacactactgaacacatccagacccacttcgaaagtcagatg
gatctccttaagcagcggaaacgcacgctacccgccactgaaggccgcaagaaggtcaag
ctgcttgggacgatggaaaacccagagaaatctaagttctgtttggaagagaaggttcag
cagcagcaggcccagtgttctgatcccaacaaggcctcaacagagaagagtccttcctct
ctttccctctgtgcaccagtcactgccaccattgatgacgtactatcggcccgaccgggg
tcggtcacgatggaagtggtccgtggaggtgcagaggagcagaaagagaatggcaagtat
ctatttagcatcaaccctgatcctcagagtcgacgcaacgtcaaaatcctggaagacgag
ccccacagcaaggacgaaactcctctcagcactctgtcggactggcaggactcattggcc
cgccgctgcatctgtgtttccaacatcatcaggagcctctcctttgtccctggcaacgac
ctggaaatgtctaaacacccgggcctcctcctgcttttgggccgtctggtgctgctccac
cacagacaccctgagcgtaaacaggcgccagtcacctatgagaaggaggaggaagaagac
gagggagtgagctgcgaccgagacgagtggtggtgggactgcctcgaggtgttgagggag
aactgcttagtcactctggccaacatctcaggccagctggacctttctatctacccagag
agtatatgcttaccactgctggacggcctgctccattgggcggtgtgcccctcggcagag
gccttggatcccttccccacactcggcccacacagctcactttcaccccagagactggtc
ctagagaccctcagcaagctcagcatccaggacaacaacgtcgacctcattttggccacg
ccaccgttcagccgcttggagaagctctacggctcgcttgtacgccttgtcggtgaacgc
aaggtggccgtctgccgggaaatggcagtcgttttgctagctaacttagctcagggcgac
agcttagcagcgcgggccatcgctgtccagaaaggcagcgtgggcaacctgctgggtttc
ctggaggacagtctagccgccacacagtaccaacagagccaaagctccttgcttcaaatg
cagggcagtccccatttcgagcctacaagcgtggacatgatgcggcgagcagcccgggcg
ctgcacgccttggccaaagtggaggagaaccactcagagttcactttgtacgagtcgcgc
ctactagacatctccgtgtctccacttatgaaccctctggtgtcccaagtcatctgtgac
gtactctttctgattggccagtcatga
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integrated database retrieval system
