Xiphophorus hellerii (green swordtail): 116730827
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Entry
116730827 CDS
T07363
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
xhe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116730827 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116730827 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116730827 (nup153)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116730827 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
116730827
NCBI-ProteinID:
XP_032436218
LinkDB
All DBs
Position
13:16077832..16096546
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AA seq
1518 aa
AA seq
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MTAIRRRNIDRQSDERAMAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVRSIVP
SWLQKYFKNGDTPAGQTGQGTEQNCQPTPPPAPPNGNEEGPPPIDGRDSPEPSTSNTEPS
TSRASLNFQEYVLSRPPLSRSHLHFTPLEASSPTMGASSCLFSPPSTSSAPGPFSTGFSL
VKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTNSGPQQSQSS
LKKPSFNLSVFGNSSNSTLNSTLLNSSQLGDSPFYPGKTTYGGAAAVRSSRGRPGTPYQA
PVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAATAGSPSRSPSMDVL
NQDGPRHQAKKKRMDSNLPPVQKLVVPAAASVSGNRSVSFRPTLTPGGLTRALDRTPREK
TPTRQSPQLPEATPGPSQSTRSFSDLVYPLSSTPAASSLSSGGGKIRRERTTTRPSSKHT
EEDEVAEAPVLPSISLPINKSSLPTFSFSPSLPPAISVSSSPSFTSTTPAKETLANKDPP
KASTPPCAPFTFSSPIVKATAASPPSYSPAVGFTFSAPVAKLAPSMSNGNLTAPTATAVK
PIASKSTEEFVGPFKPAKTLKQGSVLDLLKSPGFASPVVQNSPGTNTASQQTPTQPTTTP
SPGTSFSSSLPSPSGFGGLPSASAGWSCDVCLVQNKQSEIKCVCCQAPKPNSSPKSAESK
KTPAHSAGLQSSSTSTASASTTTGFGPIFSKPAGTWECDTCLVSNKSDAVKCVACETAKP
GTGLKPSLTFPPNFSAAKTASTPSDPVCSGISGFGDKFKKPEGAWECETCLVQNKAEDTK
CVACTASKPGASAAVSSAASSAPTFALLEQFKKPEGSWECDTCMVQNKAADVKCVACQTT
KPGATVEPKAFGSFGSSAAGASGTSTFGSSTSNPGGFKFGTSDSTAGSGSFKFGTTDSSL
SSSSGGFKFGASFGSSSSESSSKDTTASSGFKFGGSSEGFKFGAASNEDKKSDQPVAGAG
LKFGGSSEVAFGSGSSSTESNSSSKSGFTFGLTKSADKTPETTTTSSSSITLTPLTSSRG
NSDKAGSSNDTTSTNTTTATTKGSVFGRLGDPNVASGTPQVSSTFGSLQAGKEPAAPTFA
FGKPEEKKEAAPSTFVFGAVKKEPEAAAAPSGGGFSFSKPSAPADQPPPAFTFGKQAEKS
ETSTSEASKPSFSFGQTAADSTAAPKPAFSFLANNPPSATTSSSATPTPAMFGAASGGST
PAPDATSSSSSSAPSTFVFGQPSSTTGDAPPAKNFMFGQNHDNQSAAPSSAPLNPAPAPA
QPFIFGASANAASAPAPAAPSFTFGAPAAAPPAASSSAPSAAPSPFVFSSAPSGGFGANQ
NPPFASGFGSPFPATPTQTFGAKPNAAPTFGQQNNATPVFGSNTNSAPSGGFQFGGASAF
GASNNSSGVFTFGAGAGAPSAPSANPPIAPQSGAAGGSFNFTQTPAFNIGSAKTFTASPA
GQSGIAGRKIKTAVRRRK
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacatcgatagacagtcagacgaaagagccatggcggcc
acgggtggagggaaaatcagaagcaggagatatcacatcgcttctaaaccttacgccaag
agtaaacagcagtcaggcctcatcagtcgagtgacggacacagtgaggagcatcgttcct
tcctggctgcagaaatacttcaagaatggagacactcctgcaggacagacaggacaagga
acagagcagaactgccaaccaacacctcctcctgctcctcctaatggtaatgaagaggga
cctcctcccattgatggacgcgactccccagagccaagcaccagtaatacagaaccctcg
accagccgagcatccctgaactttcaggagtatgtgctttctcgaccacctctgagtcgt
tctcacctccattttaccccgctggaggcttcctcccctacaatgggggcctccagctgc
ctcttctctccgccctccacttcttcagcccctggccccttctccacaggcttctctttg
gtcaaagaaatcaaggacaacctctcgcaacacgaagacgataacatctccaccacgagt
gggttctcctcccgtgcatctgacaaggatgtcccaacttcaaaaaccgcatcacttcct
cagctttggtctccagagatggacaggacaaactctggacctcagcagtctcagtccagt
ctcaaaaagccttctttcaacctctctgtgtttggaaactcctccaattcaacgttaaac
agcacactgctgaactctagtcagcttggagattcacctttctaccctgggaaaaccacg
tatggaggagcagctgcagtcaggagctcccgcggtcgtcctggcactccatatcaggcg
ccggtgagaagacagatcaaggccaagcctgccggcgctcagccctgcggcgtgaccagc
gccaccgccaggcgcatcctgcagtctttagagcgcatgtcgagcccactggctgatgca
aagagaatcccagcagccacagcaggctcacccagtcgttctccatcgatggacgtctta
aaccaagatggtccccgtcaccaggcgaagaagaaacggatggactcaaacctccctcca
gtgcagaaactcgtggttccagctgcagcttctgtttcaggaaatcgatccgtgtctttc
aggccgactttgacgcctggaggactcacccgagccctggacaggacgccaagggaaaag
acgcccacaagacaatcaccacagctacctgaagcaaccccaggtccatctcaaagcaca
aggagtttcagtgacctggtctaccctctgtccagcacccctgcagccagcagcctgagc
tccggagggggcaagatcaggagagaaaggaccacaacacggccttcctccaaacacact
gaagaagatgaggtggctgaagcaccggtccttccaagcatttcactaccaatcaacaaa
tcatctttgcctacgttcagcttctctccatctttaccacctgccatctctgttagctcc
tcccctagcttcacatccactactcctgcgaaggagacactcgcaaacaaggatccacca
aaggcctccacaccaccctgtgcacctttcacattttcctctcctattgtcaaggcaact
gcagccagcccaccttcttactcccctgctgttggtttcaccttcagtgcacctgtagca
aagctagccccctccatgtcaaacggaaacctgacagcacccacagcaacagctgtgaaa
cctatagcaagcaagagcacagaggaatttgtaggacctttcaaaccggccaagaccttg
aagcagggcagcgtactggatcttcttaagtcacctggttttgcttctcctgttgttcaa
aattcccctggcaccaacaccgcttcccagcagacacccacccaacccacaaccactcct
tcacctggcacaagcttctcctcttcactaccttcgccatcagggtttggtggtttgccc
agtgcctcggcgggctggagctgtgacgtgtgtttggttcagaacaagcaatcggaaata
aagtgcgtttgctgtcaggccccaaagccgaactcctcaccaaaatcagcggagagcaaa
aaaactcctgcccattcagcagggctacagagcagcagcacaagcaccgcctccgcctcc
acaacaacaggatttggcccgatcttctccaaacctgcaggaacctgggagtgtgacacg
tgtctggtctcgaacaaatctgacgcagtgaagtgcgtggcctgtgaaacggccaaaccc
gggacgggactcaaaccgtcgctcactttcccccccaacttctcagctgctaagactgca
tctacaccctcagacccagtttgctctgggatcagtgggtttggagataagttcaaaaaa
ccagagggtgcgtgggaatgtgaaacatgtttggtacaaaacaaggccgaggacacaaag
tgtgtggcctgcacggcttctaaaccaggagcttcggcagccgtcagttcagcagccagc
agtgccccaacgtttgctcttttagagcagttcaagaaaccagaaggatcatgggaatgt
gacacctgcatggttcagaacaaagctgctgatgttaaatgtgttgcttgtcagacaacc
aaaccaggagctacagtggaacccaaagcctttgggtcttttggctcctcagctgctgga
gcttctgggacctccacttttggctcttctacctctaatcctgggggttttaagttcggc
acgtcggacagcacagccggatctggcagtttcaagtttggaactacagactcatcatta
tcttcatcgtcaggtggattcaaatttggagcctcgttcggaagctcctcctcggagtcg
tcctctaaagacactactgcgtcttcagggtttaaattcggtggatcctctgagggcttc
aaattcggagctgcgtccaacgaagacaagaagtcggaccagccggtggcgggtgctggg
ttgaagtttggaggcagcagcgaagtagcttttggaagtgggtcatccagcacagaaagt
aactcttcttctaaaagtggcttcacgtttggactgactaaatcggcagataaaacacca
gaaaccaccaccacgtcttcatcctctattaccttgactcctcttacttcttcacgagga
aatagtgacaaagcaggatcatcaaatgacaccacatcaactaacaccaccacagccacc
actaaggggtctgtttttgggagactaggcgatccaaatgtggcatccggcacaccacag
gtgagctctacatttggatctttacaggcagggaaggagccggcagctccaacgtttgcc
ttcggaaagccagaggagaagaaggaggcggctccgtcgaccttcgtctttggtgctgtg
aaaaaggaaccagaggctgctgctgctccctcgggaggcggcttctccttcagcaagccg
agtgcgccagcagatcagccgccgccggctttcacatttggcaagcaggcagaaaagagt
gaaacgtcgacttcagaagcctcaaagccgtctttcagctttggacaaactgctgcagat
tccactgctgctccaaaaccagccttttctttcctggctaataacccacccagcgccacc
acctcgtcatccgccaccccgacacccgccatgtttggcgccgccagcggcggctccaca
ccagcaccggacgcaacttcgtcttcatcctcctcagctcccagcacgtttgtgttcggc
cagccttcctccaccaccggtgacgctccccctgctaagaacttcatgtttggacagaat
catgacaaccagtcagcggcgccgtcgagtgctccgctgaacccggctccggcgccggct
cagccctttatctttggcgcttctgccaacgctgcttctgctcccgctcctgctgctccc
tcttttacctttggagccccagcagcagcgccccctgctgcttcctcatcagctccatct
gcagccccgtcaccgtttgtgttcagttcagctccttcaggaggttttggtgccaaccag
aatcctcctttcgcatcaggttttggatcccccttcccagccacccctacccaaaccttt
ggagccaaacccaacgctgcccccacgtttggacagcagaacaacgccacacctgtgttt
ggttccaacaccaactccgcacctagtggaggctttcagttcggaggagccagtgctttt
ggagcctcaaataactcttcaggcgtgtttacgtttggagctggagctggagcgccttct
gccccctccgccaatccccccatcgcaccccagtcaggagcagctggtggcagtttcaac
ttcacacaaactccagcatttaacatagggtcagctaagacattcaccgcctccccagct
ggacagtcagggatcgctgggcgcaagatcaaaaccgcggtgcgccgcagaaagtag
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integrated database retrieval system
